Listening on http://127.0.0.1:42515
Loading required package: bfabricShiny

Attaching package: 'bfabricShiny'

The following object is masked from 'package:base':

    save

Loading required package: PKI
Loading required package: base64enc
Warning in value[[3L]](cond) :
  Error decrypting field. (#999, 'error:0407109F:rsa routines:RSA_padding_check_PKCS1_type_2:pkcs decoding error') Passing through unaltered.
Warning in value[[3L]](cond) :
  Error decrypting field. (#999, 'error:04065072:rsa routines:rsa_ossl_private_decrypt:padding check failed') Passing through unaltered.
saving 'login and webservicepassword' ...
Warning in bfabricShiny::read(bf$login(), bf$webservicepassword(), endpoint = "user",  :
  query failed.
saving 'login and webservicepassword' ...
Warning in readLines(inputfile) :
  incomplete final line found on '/tmp/RtmpMHTFwN/89e491d4dcfc9db336da3b5e/0.txt'
saving 'login and webservicepassword' ...
Warning: Error in fix.by: 'by' must specify a uniquely valid column
  105: stop
  104: fix.by
  103: merge.data.frame
  101: deriveAminoAcidFrequence
  100: aaa:::getOutputTable
   99: FUN [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#156]
   98: lapply
   97: renderUI [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#111]
   96: func
   83: renderFunc
   82: output$outputKable
    1: runApp
Warning: Error in fix.by: 'by' must specify a uniquely valid column
  105: stop
  104: fix.by
  103: merge.data.frame
  101: deriveAminoAcidFrequence
  100: aaa:::getOutputTable
   99: FUN [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#156]
   98: lapply
   97: renderUI [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#111]
   96: func
   83: renderFunc
   82: output$outputKable
    1: runApp
Warning: Error in fix.by: 'by' must specify a uniquely valid column
  105: stop
  104: fix.by
  103: merge.data.frame
  101: deriveAminoAcidFrequence
  100: aaa:::getOutputTable
   99: FUN [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#156]
   98: lapply
   97: renderUI [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#111]
   96: func
   83: renderFunc
   82: output$outputKable
    1: runApp
Warning: Error in fix.by: 'by' must specify a uniquely valid column
  105: stop
  104: fix.by
  103: merge.data.frame
  101: deriveAminoAcidFrequence
  100: aaa:::getOutputTable
   99: FUN [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#156]
   98: lapply
   97: renderUI [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#111]
   96: func
   83: renderFunc
   82: output$outputKable
    1: runApp
saving 'login and webservicepassword' ...
Warning: Error in fix.by: 'by' must specify a uniquely valid column
  105: stop
  104: fix.by
  103: merge.data.frame
  101: deriveAminoAcidFrequence
  100: aaa:::getOutputTable
   99: FUN [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#156]
   98: lapply
   97: renderUI [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#111]
   96: func
   83: renderFunc
   82: output$outputKable
    1: runApp
saving 'login and webservicepassword' ...
Warning: Error in fix.by: 'by' must specify a uniquely valid column
  105: stop
  104: fix.by
  103: merge.data.frame
  101: deriveAminoAcidFrequence
  100: aaa:::getOutputTable
   99: FUN [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#156]
   98: lapply
   97: renderUI [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#111]
   96: func
   83: renderFunc
   82: output$outputKable
    1: runApp
saving 'login and webservicepassword' ...
Warning: Error in fix.by: 'by' must specify a uniquely valid column
  105: stop
  104: fix.by
  103: merge.data.frame
  101: deriveAminoAcidFrequence
  100: aaa:::getOutputTable
   99: FUN [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#156]
   98: lapply
   97: renderUI [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#111]
   96: func
   83: renderFunc
   82: output$outputKable
    1: runApp
saving 'login and webservicepassword' ...
saving 'login and webservicepassword' ...
Warning: Error in fix.by: 'by' must specify a uniquely valid column
  105: stop
  104: fix.by
  103: merge.data.frame
  101: deriveAminoAcidFrequence
  100: aaa:::getOutputTable
   99: FUN [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#156]
   98: lapply
   97: renderUI [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#111]
   96: func
   83: renderFunc
   82: output$outputKable
    1: runApp
Warning: Error in fix.by: 'by' must specify a uniquely valid column
  105: stop
  104: fix.by
  103: merge.data.frame
  101: deriveAminoAcidFrequence
  100: aaa:::getOutputTable
   99: FUN [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#156]
   98: lapply
   97: renderUI [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#111]
   96: func
   83: renderFunc
   82: output$outputKable
    1: runApp
saving 'login and webservicepassword' ...
Warning: Error in fix.by: 'by' must specify a uniquely valid column
  105: stop
  104: fix.by
  103: merge.data.frame
  101: deriveAminoAcidFrequence
  100: aaa:::getOutputTable
   99: FUN [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#156]
   98: lapply
   97: renderUI [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#111]
   96: func
   83: renderFunc
   82: output$outputKable
    1: runApp
saving 'login and webservicepassword' ...
generateReport


processing file: report.Rmd
output file: report.knit.md


Output created: aaa-report_Valentin_von Roten_31353_20230405.pdf
bfabricUpload


Execution halted