Listening on http://127.0.0.1:43337
Loading required package: bfabricShiny

Attaching package: 'bfabricShiny'

The following object is masked from 'package:base':

    save

Loading required package: PKI
Loading required package: base64enc
saving 'login and webservicepassword' ...
read bfabricposturl https://fgcz-c-072.uzh.ch:5000/.
Warning in shinyStore::updateStore(session, "login", isolate(input$login),  :
  Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user.
Warning in shinyStore::updateStore(session, "webservicepassword", isolate(input$webservicepassword),  :
  Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user.
Warning in shinyStore::updateStore(session, "login", isolate(input$login),  :
  Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user.
Warning in shinyStore::updateStore(session, "webservicepassword", isolate(input$webservicepassword),  :
  Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user.
Warning: Error in fix.by: 'by' must specify a uniquely valid column
  105: stop
  104: fix.by
  103: merge.data.frame
  101: deriveAminoAcidFrequence
  100: aaa:::getOutputTable
   99: FUN [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#161]
   98: lapply
   97: renderUI [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#116]
   96: func
   83: renderFunc
   82: output$outputKable
    1: runApp
Warning in bfabricShiny::read(bf$login(), bf$webservicepassword(), posturl = posturl(),  :
  query failed.
Warning: Error in $: $ operator is invalid for atomic vectors
  117: <reactive:read_customername> [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#214]
  101: read_customername
   97: renderUI [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#222]
   96: func
   83: renderFunc
   82: output$customerInfo
    1: runApp
Warning in shinyStore::updateStore(session, "login", isolate(input$login),  :
  Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user.
Warning in shinyStore::updateStore(session, "webservicepassword", isolate(input$webservicepassword),  :
  Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user.
Warning in shinyStore::updateStore(session, "login", isolate(input$login),  :
  Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user.
Warning in shinyStore::updateStore(session, "webservicepassword", isolate(input$webservicepassword),  :
  Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user.
saving 'login and webservicepassword' ...
read bfabricposturl https://fgcz-c-072.uzh.ch:5000/.
saving 'login and webservicepassword' ...
Warning: Error in fix.by: 'by' must specify a uniquely valid column
  105: stop
  104: fix.by
  103: merge.data.frame
  101: deriveAminoAcidFrequence
  100: aaa:::getOutputTable
   99: FUN [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#161]
   98: lapply
   97: renderUI [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#116]
   96: func
   83: renderFunc
   82: output$outputKable
    1: runApp
Warning in bfabricShiny::read(bf$login(), bf$webservicepassword(), posturl = posturl(),  :
  query failed.
Warning: Error in $: $ operator is invalid for atomic vectors
  117: <reactive:read_customername> [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#214]
  101: read_customername
   97: renderUI [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#222]
   96: func
   83: renderFunc
   82: output$customerInfo
    1: runApp
Warning: Error in fix.by: 'by' must specify a uniquely valid column
  105: stop
  104: fix.by
  103: merge.data.frame
  101: deriveAminoAcidFrequence
  100: aaa:::getOutputTable
   99: FUN [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#161]
   98: lapply
   97: renderUI [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#116]
   96: func
   83: renderFunc
   82: output$outputKable
    1: runApp
Warning in bfabricShiny::read(bf$login(), bf$webservicepassword(), posturl = posturl(),  :
  query failed.
Warning: Error in $: $ operator is invalid for atomic vectors
  117: <reactive:read_customername> [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#214]
  101: read_customername
   97: renderUI [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#222]
   96: func
   83: renderFunc
   82: output$customerInfo
    1: runApp
saving 'login and webservicepassword' ...
Warning: Error in fix.by: 'by' must specify a uniquely valid column
  105: stop
  104: fix.by
  103: merge.data.frame
  101: deriveAminoAcidFrequence
  100: aaa:::getOutputTable
   99: FUN [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#161]
   98: lapply
   97: renderUI [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#116]
   96: func
   83: renderFunc
   82: output$outputKable
    1: runApp
Warning in bfabricShiny::read(bf$login(), bf$webservicepassword(), posturl = posturl(),  :
  query failed.
Warning: Error in $: $ operator is invalid for atomic vectors
  117: <reactive:read_customername> [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#214]
  101: read_customername
   97: renderUI [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#222]
   96: func
   83: renderFunc
   82: output$customerInfo
    1: runApp
Warning: Error in fix.by: 'by' must specify a uniquely valid column
  105: stop
  104: fix.by
  103: merge.data.frame
  101: deriveAminoAcidFrequence
  100: aaa:::getOutputTable
   99: FUN [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#161]
   98: lapply
   97: renderUI [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#116]
   96: func
   83: renderFunc
   82: output$outputKable
    1: runApp
saving 'login and webservicepassword' ...
Warning: Error in fix.by: 'by' must specify a uniquely valid column
  105: stop
  104: fix.by
  103: merge.data.frame
  101: deriveAminoAcidFrequence
  100: aaa:::getOutputTable
   99: FUN [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#161]
   98: lapply
   97: renderUI [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#116]
   96: func
   83: renderFunc
   82: output$outputKable
    1: runApp
saving 'login and webservicepassword' ...
saving 'login and webservicepassword' ...
generateReport
Warning: Error in file.copy: no files to copy to
  150: stop
  149: file.copy
  148: eventReactiveValueFunc [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#932]
  104: report
   97: renderUI [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#951]
   96: func
   83: renderFunc
   82: output$downloadReportButton
    1: runApp
Warning: Error in file.copy: no files to copy to
  150: stop
  149: file.copy
  148: eventReactiveValueFunc [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#932]
  104: report
   97: renderUI [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#951]
   96: func
   83: renderFunc
   82: output$downloadReportButton
    1: runApp
generateReport
Warning: Error in file.copy: no files to copy to
  150: stop
  149: file.copy
  148: eventReactiveValueFunc [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#932]
  104: report
   97: renderUI [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#951]
   96: func
   83: renderFunc
   82: output$downloadReportButton
    1: runApp
Warning: Error in file.copy: no files to copy to
  150: stop
  149: file.copy
  148: eventReactiveValueFunc [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#932]
  104: report
   97: renderUI [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#951]
   96: func
   83: renderFunc
   82: output$downloadReportButton
    1: runApp
Warning in bfabricShiny::read(bf$login(), bf$webservicepassword(), posturl = posturl(),  :
  query failed.
Warning: Error in $: $ operator is invalid for atomic vectors
  117: <reactive:read_customername> [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#214]
  101: read_customername
   97: renderUI [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#222]
   96: func
   83: renderFunc
   82: output$customerInfo
    1: runApp
Warning: Error in file.copy: no files to copy to
  150: stop
  149: file.copy
  148: eventReactiveValueFunc [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#932]
  104: report
   97: renderUI [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#951]
   96: func
   83: renderFunc
   82: output$downloadReportButton
    1: runApp
Warning: Error in fix.by: 'by' must specify a uniquely valid column
  105: stop
  104: fix.by
  103: merge.data.frame
  101: deriveAminoAcidFrequence
  100: aaa:::getOutputTable
   99: FUN [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#161]
   98: lapply
   97: renderUI [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#116]
   96: func
   83: renderFunc
   82: output$outputKable
    1: runApp
Warning in bfabricShiny::read(bf$login(), bf$webservicepassword(), posturl = posturl(),  :
  query failed.
Warning: Error in $: $ operator is invalid for atomic vectors
  117: <reactive:read_customername> [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#214]
  101: read_customername
   97: renderUI [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#222]
   96: func
   83: renderFunc
   82: output$customerInfo
    1: runApp
Warning: Error in file.copy: no files to copy to
  150: stop
  149: file.copy
  148: eventReactiveValueFunc [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#932]
  104: report
   97: renderUI [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#951]
   96: func
   83: renderFunc
   82: output$downloadReportButton
    1: runApp
Warning: Error in fix.by: 'by' must specify a uniquely valid column
  105: stop
  104: fix.by
  103: merge.data.frame
  101: deriveAminoAcidFrequence
  100: aaa:::getOutputTable
   99: FUN [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#161]
   98: lapply
   97: renderUI [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#116]
   96: func
   83: renderFunc
   82: output$outputKable
    1: runApp
saving 'login and webservicepassword' ...
Warning: Error in fix.by: 'by' must specify a uniquely valid column
  105: stop
  104: fix.by
  103: merge.data.frame
  101: deriveAminoAcidFrequence
  100: aaa:::getOutputTable
   99: FUN [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#161]
   98: lapply
   97: renderUI [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#116]
   96: func
   83: renderFunc
   82: output$outputKable
    1: runApp
saving 'login and webservicepassword' ...
generateReport
Warning: Error in file.copy: no files to copy to
  150: stop
  149: file.copy
  148: eventReactiveValueFunc [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#932]
  104: report
   97: renderUI [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#951]
   96: func
   83: renderFunc
   82: output$downloadReportButton
    1: runApp
Warning: Error in file.copy: no files to copy to
  150: stop
  149: file.copy
  148: eventReactiveValueFunc [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#932]
  104: report
   97: renderUI [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#951]
   96: func
   83: renderFunc
   82: output$downloadReportButton
    1: runApp
Warning in bfabricShiny::read(bf$login(), bf$webservicepassword(), posturl = posturl(),  :
  query failed.
Warning: Error in $: $ operator is invalid for atomic vectors
  117: <reactive:read_customername> [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#214]
  101: read_customername
   97: renderUI [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#222]
   96: func
   83: renderFunc
   82: output$customerInfo
    1: runApp
Warning: Error in file.copy: no files to copy to
  150: stop
  149: file.copy
  148: eventReactiveValueFunc [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#932]
  104: report
   97: renderUI [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#951]
   96: func
   83: renderFunc
   82: output$downloadReportButton
    1: runApp
Warning in bfabricShiny::read(bf$login(), bf$webservicepassword(), posturl = posturl(),  :
  query failed.
Warning: Error in $: $ operator is invalid for atomic vectors
  117: <reactive:read_customername> [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#214]
  101: read_customername
   97: renderUI [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#222]
   96: func
   83: renderFunc
   82: output$customerInfo
    1: runApp
saving 'login and webservicepassword' ...
read bfabricposturl https://fgcz-c-072.uzh.ch:5000/.
Warning in bfabricShiny::read(bf$login(), bf$webservicepassword(), posturl = posturl(),  :
  query failed.
saving 'login and webservicepassword' ...
Warning: Error in fix.by: 'by' must specify a uniquely valid column
  105: stop
  104: fix.by
  103: merge.data.frame
  101: deriveAminoAcidFrequence
  100: aaa:::getOutputTable
   99: FUN [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#161]
   98: lapply
   97: renderUI [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#116]
   96: func
   83: renderFunc
   82: output$outputKable
    1: runApp
Warning in bfabricShiny::read(bf$login(), bf$webservicepassword(), posturl = posturl(),  :
  query failed.
Warning: Error in $: $ operator is invalid for atomic vectors
  117: <reactive:read_customername> [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#214]
  101: read_customername
   97: renderUI [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#222]
   96: func
   83: renderFunc
   82: output$customerInfo
    1: runApp
saving 'login and webservicepassword' ...
saving 'login and webservicepassword' ...
generateReport
Warning: Error in file.copy: no files to copy to
  150: stop
  149: file.copy
  148: eventReactiveValueFunc [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#932]
  104: report
   97: renderUI [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#951]
   96: func
   83: renderFunc
   82: output$downloadReportButton
    1: runApp
Warning: Error in file.copy: no files to copy to
  150: stop
  149: file.copy
  148: eventReactiveValueFunc [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#932]
  104: report
   97: renderUI [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#951]
   96: func
   83: renderFunc
   82: output$downloadReportButton
    1: runApp


Execution halted