Listening on http://127.0.0.1:43277 Loading required package: bfabricShiny Attaching package: 'bfabricShiny' The following object is masked from 'package:base': save Loading required package: PKI Loading required package: base64enc saving 'login and webservicepassword' ... read bfabricposturl https://fgcz-c-072.uzh.ch:5000/. saving 'login and webservicepassword' ... Warning: Error in fix.by: 'by' must specify a uniquely valid column 105: stop 104: fix.by 103: merge.data.frame 101: deriveAminoAcidFrequence 100: aaa:::getOutputTable 99: FUN [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#161] 98: lapply 97: renderUI [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#116] 96: func 83: renderFunc 82: output$outputKable 1: runApp saving 'login and webservicepassword' ... saving 'login and webservicepassword' ... Warning: Error in fix.by: 'by' must specify a uniquely valid column 105: stop 104: fix.by 103: merge.data.frame 101: deriveAminoAcidFrequence 100: aaa:::getOutputTable 99: FUN [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#161] 98: lapply 97: renderUI [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#116] 96: func 83: renderFunc 82: output$outputKable 1: runApp saving 'login and webservicepassword' ... Warning: Error in fix.by: 'by' must specify a uniquely valid column 105: stop 104: fix.by 103: merge.data.frame 101: deriveAminoAcidFrequence 100: aaa:::getOutputTable 99: FUN [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#161] 98: lapply 97: renderUI [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#116] 96: func 83: renderFunc 82: output$outputKable 1: runApp saving 'login and webservicepassword' ... Warning: Error in fix.by: 'by' must specify a uniquely valid column 105: stop 104: fix.by 103: merge.data.frame 101: deriveAminoAcidFrequence 100: aaa:::getOutputTable 99: FUN [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#161] 98: lapply 97: renderUI [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#116] 96: func 83: renderFunc 82: output$outputKable 1: runApp saving 'login and webservicepassword' ... Warning: Error in fix.by: 'by' must specify a uniquely valid column 105: stop 104: fix.by 103: merge.data.frame 101: deriveAminoAcidFrequence 100: aaa:::getOutputTable 99: FUN [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#161] 98: lapply 97: renderUI [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#116] 96: func 83: renderFunc 82: output$outputKable 1: runApp saving 'login and webservicepassword' ... Warning: Error in fix.by: 'by' must specify a uniquely valid column 105: stop 104: fix.by 103: merge.data.frame 101: deriveAminoAcidFrequence 100: aaa:::getOutputTable 99: FUN [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#161] 98: lapply 97: renderUI [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#116] 96: func 83: renderFunc 82: output$outputKable 1: runApp saving 'login and webservicepassword' ... Warning: Error in fix.by: 'by' must specify a uniquely valid column 105: stop 104: fix.by 103: merge.data.frame 101: deriveAminoAcidFrequence 100: aaa:::getOutputTable 99: FUN [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#161] 98: lapply 97: renderUI [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#116] 96: func 83: renderFunc 82: output$outputKable 1: runApp saving 'login and webservicepassword' ... Warning: Error in fix.by: 'by' must specify a uniquely valid column 105: stop 104: fix.by 103: merge.data.frame 101: deriveAminoAcidFrequence 100: aaa:::getOutputTable 99: FUN [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#161] 98: lapply 97: renderUI [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#116] 96: func 83: renderFunc 82: output$outputKable 1: runApp saving 'login and webservicepassword' ... Warning: Error in fix.by: 'by' must specify a uniquely valid column 105: stop 104: fix.by 103: merge.data.frame 101: deriveAminoAcidFrequence 100: aaa:::getOutputTable 99: FUN [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#161] 98: lapply 97: renderUI [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#116] 96: func 83: renderFunc 82: output$outputKable 1: runApp saving 'login and webservicepassword' ... Warning: Error in fix.by: 'by' must specify a uniquely valid column 105: stop 104: fix.by 103: merge.data.frame 101: deriveAminoAcidFrequence 100: aaa:::getOutputTable 99: FUN [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#161] 98: lapply 97: renderUI [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#116] 96: func 83: renderFunc 82: output$outputKable 1: runApp saving 'login and webservicepassword' ... Warning: Error in fix.by: 'by' must specify a uniquely valid column 105: stop 104: fix.by 103: merge.data.frame 101: deriveAminoAcidFrequence 100: aaa:::getOutputTable 99: FUN [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#161] 98: lapply 97: renderUI [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#116] 96: func 83: renderFunc 82: output$outputKable 1: runApp saving 'login and webservicepassword' ... Warning: Error in fix.by: 'by' must specify a uniquely valid column 105: stop 104: fix.by 103: merge.data.frame 101: deriveAminoAcidFrequence 100: aaa:::getOutputTable 99: FUN [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#161] 98: lapply 97: renderUI [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#116] 96: func 83: renderFunc 82: output$outputKable 1: runApp saving 'login and webservicepassword' ... generateReport processing file: report.Rmd output file: report.knit.md Output created: aaa-report_Franz_Huschner_36121_20240902.pdf bfabricUpload Execution halted