Listening on http://127.0.0.1:37949 Loading required package: bfabricShiny Attaching package: 'bfabricShiny' The following object is masked from 'package:base': save Loading required package: PKI Loading required package: base64enc saving 'login and webservicepassword' ... read bfabricposturl https://fgcz-c-072.uzh.ch:5000/. saving 'login and webservicepassword' ... Warning: Error in fix.by: 'by' must specify a uniquely valid column 105: stop 104: fix.by 103: merge.data.frame 101: deriveAminoAcidFrequence 100: aaa:::getOutputTable 99: FUN [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#161] 98: lapply 97: renderUI [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#116] 96: func 83: renderFunc 82: output$outputKable 1: runApp saving 'login and webservicepassword' ... saving 'login and webservicepassword' ... Warning: Error in fix.by: 'by' must specify a uniquely valid column 105: stop 104: fix.by 103: merge.data.frame 101: deriveAminoAcidFrequence 100: aaa:::getOutputTable 99: FUN [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#161] 98: lapply 97: renderUI [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#116] 96: func 83: renderFunc 82: output$outputKable 1: runApp saving 'login and webservicepassword' ... Warning in amount * amino_acid_mass : longer object length is not a multiple of shorter object length Warning in amount * amino_acid_mass : longer object length is not a multiple of shorter object length Warning in amount * amino_acid_mass : longer object length is not a multiple of shorter object length Warning: Error in [<-.data.frame: replacement has 19 rows, data has 16 86: stop 85: [<-.data.frame 83: kableExtra::kable 81: output$outputKable1 [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#147] 1: runApp Warning in amount * amino_acid_mass : longer object length is not a multiple of shorter object length Warning: Error in [<-.data.frame: replacement has 19 rows, data has 16 86: stop 85: [<-.data.frame 83: kableExtra::kable 81: output$outputKable2 [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#147] 1: runApp Warning in amount * amino_acid_mass : longer object length is not a multiple of shorter object length Warning: Error in [<-.data.frame: replacement has 19 rows, data has 16 86: stop 85: [<-.data.frame 83: kableExtra::kable 81: output$outputKable1 [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#147] 1: runApp saving 'login and webservicepassword' ... Warning in amount * amino_acid_mass : longer object length is not a multiple of shorter object length Warning: Error in [<-.data.frame: replacement has 19 rows, data has 16 86: stop 85: [<-.data.frame 83: kableExtra::kable 81: output$outputKable2 [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#147] 1: runApp Warning in amount * amino_acid_mass : longer object length is not a multiple of shorter object length Warning in amount * amino_acid_mass : longer object length is not a multiple of shorter object length Warning: Error in [<-.data.frame: replacement has 19 rows, data has 16 86: stop 85: [<-.data.frame 83: kableExtra::kable 81: output$outputKable1 [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#147] 1: runApp generateReport processing file: report.Rmd output file: report.knit.md Output created: aaa-report_Marianna_Carone_36243_20240912.pdf bfabricUpload bfabricUpload generateReport processing file: report.Rmd output file: report.knit.md Output created: aaa-report_Marianna_Carone_36243_20240912.pdf bfabricUpload saving 'login and webservicepassword' ... read bfabricposturl https://fgcz-c-072.uzh.ch:5000/. saving 'login and webservicepassword' ... Warning: Error in fix.by: 'by' must specify a uniquely valid column 105: stop 104: fix.by 103: merge.data.frame 101: deriveAminoAcidFrequence 100: aaa:::getOutputTable 99: FUN [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#161] 98: lapply 97: renderUI [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#116] 96: func 83: renderFunc 82: output$outputKable 1: runApp saving 'login and webservicepassword' ... saving 'login and webservicepassword' ... saving 'login and webservicepassword' ... read bfabricposturl https://fgcz-c-072.uzh.ch:5000/. saving 'login and webservicepassword' ... read bfabricposturl https://fgcz-c-072.uzh.ch:5000/. saving 'login and webservicepassword' ... Warning: Error in fix.by: 'by' must specify a uniquely valid column 105: stop 104: fix.by 103: merge.data.frame 101: deriveAminoAcidFrequence 100: aaa:::getOutputTable 99: FUN [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#161] 98: lapply 97: renderUI [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#116] 96: func 83: renderFunc 82: output$outputKable 1: runApp saving 'login and webservicepassword' ... saving 'login and webservicepassword' ... Warning: Error in fix.by: 'by' must specify a uniquely valid column 105: stop 104: fix.by 103: merge.data.frame 101: deriveAminoAcidFrequence 100: aaa:::getOutputTable 99: FUN [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#161] 98: lapply 97: renderUI [/usr/local/lib/R/site-library/aaa/shiny/aminoAcidAnalysis/server.R#116] 96: func 83: renderFunc 82: output$outputKable 1: runApp saving 'login and webservicepassword' ... generateReport processing file: report.Rmd output file: report.knit.md Output created: aaa-report_Marianna_Carone_36243_20240912.pdf bfabricUpload Execution halted