Listening on http://127.0.0.1:43031
Loading required package: bfabricShiny

Attaching package: 'bfabricShiny'

The following object is masked from 'package:base':

    save

Loading required package: protViz
Loading required package: rawDiag
Loading required package: parallel
Loading required package: tidyr
Loading required package: rmarkdown
Loading required package: base64enc
Loading required package: ggplot2
Loading required package: lattice
Loading required package: PKI



#rows are 0
/scratch/cpanse/
saving 'login and webservicepassword' ...
output$employee <- renderUI({
read bfabricposturl https://fgcz-c-072.uzh.ch:5002/.
DEBUG XXX   https://fgcz-c-072.uzh.ch:5002/
Warning in .read(login = login, webservicepassword = webservicepassword,  :
  query failed.
bfabricConnectionWorking FALSE
output$employee <- renderUI({
DEBUG XXX cpanse ff0cf7fe17d5fdf3b9ea03e6647dcc2f https://fgcz-c-072.uzh.ch:5002/
DEBUG XXX cpanse ff0cf7fe17d5fdf3b9ea03e6647dcc2f https://fgcz-c-072.uzh.ch:5002/
bfabricConnectionWorking TRUE
DEBUG XXX cpanse ff0cf7fe17d5fdf3b9ea03e6647dcc2f https://fgcz-c-072.uzh.ch:5002/
DEBUG XXX cpanse ff0cf7fe17d5fdf3b9ea03e6647dcc2f https://fgcz-c-072.uzh.ch:5002/
'empdegree' found.
saving 'login and webservicepassword' ...
DEBUG XXX cpanse ff0cf7fe17d5fdf3b9ea03e6647dcc2f https://fgcz-c-072.uzh.ch:5002/
DEBUG XXX cpanse ff0cf7fe17d5fdf3b9ea03e6647dcc2f https://fgcz-c-072.uzh.ch:5002/
DEBUG XXX cpanse ff0cf7fe17d5fdf3b9ea03e6647dcc2f https://fgcz-c-072.uzh.ch:5002/
DEBUG XXX cpanse ff0cf7fe17d5fdf3b9ea03e6647dcc2f https://fgcz-c-072.uzh.ch:5002/
DEBUG XXX cpanse ff0cf7fe17d5fdf3b9ea03e6647dcc2f https://fgcz-c-072.uzh.ch:5002/
DEBUG XXX cpanse ff0cf7fe17d5fdf3b9ea03e6647dcc2f https://fgcz-c-072.uzh.ch:5002/
saving 'login and webservicepassword' ...
saving 'login and webservicepassword' ...
DEBUG XXX cpanse ff0cf7fe17d5fdf3b9ea03e6647dcc2f https://fgcz-c-072.uzh.ch:5002/
executing mono /usr/local/lib/R/site-library/rawDiag/exec/fgcz_raw.exe /srv/www/htdocs//p30065/Metabolomics/QEXACTIVE_2/sstreb_20230120_030065_SOP1neg_pH8/sstreb_20230120_o30065_SOP1_neg_sample_4806_301.raw qc ...
missing column name(s): MasterScanNumber, LMCorrection, ElapsedScanTimesec, transient, AGCMode, PrescanMode
MasterScanNumber calculated
renamed LMmZCorrectionppm to LMCorrection
renamed AGCPSMode to PrescanMode
#rows are 13480
output$tic.basepeak <- renderPlot({
#rows are 13480
output$download 2...
saving 'login and webservicepassword' ...
`geom_smooth()` using formula = 'y ~ x'
#rows are 13480
output$download 2...
#rows are 13480
output$download 2...


#rows are 0
saving 'login and webservicepassword' ...
output$employee <- renderUI({
read bfabricposturl https://fgcz-c-072.uzh.ch:5002/.
DEBUG XXX   https://fgcz-c-072.uzh.ch:5002/
Warning in .read(login = login, webservicepassword = webservicepassword,  :
  query failed.
bfabricConnectionWorking FALSE
output$employee <- renderUI({
DEBUG XXX tobiasko 579241ed4b36432de5096a2239dabafd https://fgcz-c-072.uzh.ch:5002/
DEBUG XXX tobiasko 579241ed4b36432de5096a2239dabafd https://fgcz-c-072.uzh.ch:5002/
bfabricConnectionWorking TRUE
DEBUG XXX tobiasko 579241ed4b36432de5096a2239dabafd https://fgcz-c-072.uzh.ch:5002/
DEBUG XXX tobiasko 579241ed4b36432de5096a2239dabafd https://fgcz-c-072.uzh.ch:5002/
'empdegree' found.
saving 'login and webservicepassword' ...
DEBUG XXX tobiasko 579241ed4b36432de5096a2239dabafd https://fgcz-c-072.uzh.ch:5002/


Execution halted