Listening on http://127.0.0.1:45391 Loading required package: rawDiag Loading required package: bfabricShiny Attaching package: 'bfabricShiny' The following object is masked from 'package:base': save plotChargeState output$employee <- renderUI({ read bfabricposturl https://fgcz-c-072.uzh.ch:5000/. Warning in .read(login = login, webservicepassword = webservicepassword, : query failed. bfabricConnectionWorking FALSE saving 'login and webservicepassword' ... output$employee <- renderUI({ bfabricConnectionWorking TRUE 'empdegree' found. Warning in shinyStore::updateStore(session, "login", isolate(input$login), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "webservicepassword", isolate(input$webservicepassword), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "project", isolate(input$project), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "login", isolate(input$login), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "webservicepassword", isolate(input$webservicepassword), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "project", isolate(input$project), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "login", isolate(input$login), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "webservicepassword", isolate(input$webservicepassword), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "project", isolate(input$project), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "login", isolate(input$login), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "webservicepassword", isolate(input$webservicepassword), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "project", isolate(input$project), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. resourcesSelected: /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_002_S611745_KV2_NF54_AP2G-GFP_pos_Serum.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_010_S611759_KV16_NF54_MSRP1-mNG_neg_Serum.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_016_S611746_KV3_NF54_AP2G-GFP_pos_Serum.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_013_S611748_KV5_NF54_AP2G-GFP_neg_Serum.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_031_S611758_KV15_NF54_MSRP1-mNG_pos_Serum.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_029_S611749_KV6_NF54_AP2G-GFP_neg_Serum.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_020_S611756_KV13_NF54_MSRP1-mNG_pos_Serum.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_004_S611744_KV1_NF54_AP2G-GFP_pos_Serum.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_018_S611761_KV18_NF54_MSRP1-mNG_neg_Serum.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_027_S611747_KV4_NF54_AP2G-GFP_neg_Serum.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_026_S611757_KV14_NF54_MSRP1-mNG_pos_Serum.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_024_S611760_KV17_NF54_MSRP1-mNG_neg_Serum.raw vals$rawfile: /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_002_S611745_KV2_NF54_AP2G-GFP_pos_Serum.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_010_S611759_KV16_NF54_MSRP1-mNG_neg_Serum.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_016_S611746_KV3_NF54_AP2G-GFP_pos_Serum.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_013_S611748_KV5_NF54_AP2G-GFP_neg_Serum.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_031_S611758_KV15_NF54_MSRP1-mNG_pos_Serum.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_029_S611749_KV6_NF54_AP2G-GFP_neg_Serum.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_020_S611756_KV13_NF54_MSRP1-mNG_pos_Serum.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_004_S611744_KV1_NF54_AP2G-GFP_pos_Serum.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_018_S611761_KV18_NF54_MSRP1-mNG_neg_Serum.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_027_S611747_KV4_NF54_AP2G-GFP_neg_Serum.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_026_S611757_KV14_NF54_MSRP1-mNG_pos_Serum.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_024_S611760_KV17_NF54_MSRP1-mNG_neg_Serum.raw reading index for 20240103_C33795_002_S611745_KV2_NF54_AP2G-GFP_pos_Serum.raw... reading index for 20240103_C33795_010_S611759_KV16_NF54_MSRP1-mNG_neg_Serum.raw... reading index for 20240103_C33795_016_S611746_KV3_NF54_AP2G-GFP_pos_Serum.raw... reading index for 20240103_C33795_013_S611748_KV5_NF54_AP2G-GFP_neg_Serum.raw... reading index for 20240103_C33795_031_S611758_KV15_NF54_MSRP1-mNG_pos_Serum.raw... reading index for 20240103_C33795_029_S611749_KV6_NF54_AP2G-GFP_neg_Serum.raw... reading index for 20240103_C33795_020_S611756_KV13_NF54_MSRP1-mNG_pos_Serum.raw... reading index for 20240103_C33795_004_S611744_KV1_NF54_AP2G-GFP_pos_Serum.raw... reading index for 20240103_C33795_018_S611761_KV18_NF54_MSRP1-mNG_neg_Serum.raw... reading index for 20240103_C33795_027_S611747_KV4_NF54_AP2G-GFP_neg_Serum.raw... reading index for 20240103_C33795_026_S611757_KV14_NF54_MSRP1-mNG_pos_Serum.raw... reading index for 20240103_C33795_024_S611760_KV17_NF54_MSRP1-mNG_neg_Serum.raw... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... resourcesSelected: /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_002_S611745_KV2_NF54_AP2G-GFP_pos_Serum.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_010_S611759_KV16_NF54_MSRP1-mNG_neg_Serum.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_016_S611746_KV3_NF54_AP2G-GFP_pos_Serum.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_013_S611748_KV5_NF54_AP2G-GFP_neg_Serum.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_031_S611758_KV15_NF54_MSRP1-mNG_pos_Serum.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_029_S611749_KV6_NF54_AP2G-GFP_neg_Serum.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_020_S611756_KV13_NF54_MSRP1-mNG_pos_Serum.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_004_S611744_KV1_NF54_AP2G-GFP_pos_Serum.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_018_S611761_KV18_NF54_MSRP1-mNG_neg_Serum.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_027_S611747_KV4_NF54_AP2G-GFP_neg_Serum.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_026_S611757_KV14_NF54_MSRP1-mNG_pos_Serum.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_024_S611760_KV17_NF54_MSRP1-mNG_neg_Serum.raw vals$rawfile: /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_002_S611745_KV2_NF54_AP2G-GFP_pos_Serum.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_010_S611759_KV16_NF54_MSRP1-mNG_neg_Serum.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_016_S611746_KV3_NF54_AP2G-GFP_pos_Serum.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_013_S611748_KV5_NF54_AP2G-GFP_neg_Serum.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_031_S611758_KV15_NF54_MSRP1-mNG_pos_Serum.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_029_S611749_KV6_NF54_AP2G-GFP_neg_Serum.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_020_S611756_KV13_NF54_MSRP1-mNG_pos_Serum.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_004_S611744_KV1_NF54_AP2G-GFP_pos_Serum.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_018_S611761_KV18_NF54_MSRP1-mNG_neg_Serum.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_027_S611747_KV4_NF54_AP2G-GFP_neg_Serum.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_026_S611757_KV14_NF54_MSRP1-mNG_pos_Serum.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_024_S611760_KV17_NF54_MSRP1-mNG_neg_Serum.raw plotTicBasepeak ggplot2::ggsave to file /tmp/Rtmp1cwcP3/rawDiag_20240105-103835_plotTicBasepeak.pdf Warning in shinyStore::updateStore(session, "login", isolate(input$login), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "webservicepassword", isolate(input$webservicepassword), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "project", isolate(input$project), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. The current plot is available as workunit 298306. Rendering actionButton to link workunit 298306 in B-Fabric. Warning in shinyStore::updateStore(session, "login", isolate(input$login), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "webservicepassword", isolate(input$webservicepassword), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "project", isolate(input$project), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. resourcesSelected: /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_009_S611754_KV11_NF54_AP2G-GFP_neg_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_014_S611750_KV7_NF54_AP2G-GFP_pos_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_021_S611755_KV12_NF54_AP2G-GFP_neg_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_005_S611762_KV19_NF54_MSRP1-mNG_pos_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_003_S611766_KV23_NF54_MSRP1-mNG_neg_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_025_S611751_KV8_NF54_AP2G-GFP_pos_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_030_S611764_KV21_NF54_MSRP1-mNG_pos_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_032_S611765_KV22_NF54_MSRP1-mNG_neg_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_015_S611767_KV24_NF54_MSRP1-mNG_neg_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_008_S611752_KV9_NF54_AP2G-GFP_pos_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_019_S611753_KV10_NF54_AP2G-GFP_neg_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_007_S611763_KV20_NF54_MSRP1-mNG_pos_AC.raw vals$rawfile: /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_009_S611754_KV11_NF54_AP2G-GFP_neg_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_014_S611750_KV7_NF54_AP2G-GFP_pos_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_021_S611755_KV12_NF54_AP2G-GFP_neg_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_005_S611762_KV19_NF54_MSRP1-mNG_pos_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_003_S611766_KV23_NF54_MSRP1-mNG_neg_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_025_S611751_KV8_NF54_AP2G-GFP_pos_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_030_S611764_KV21_NF54_MSRP1-mNG_pos_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_032_S611765_KV22_NF54_MSRP1-mNG_neg_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_015_S611767_KV24_NF54_MSRP1-mNG_neg_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_008_S611752_KV9_NF54_AP2G-GFP_pos_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_019_S611753_KV10_NF54_AP2G-GFP_neg_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_007_S611763_KV20_NF54_MSRP1-mNG_pos_AC.raw reading index for 20240103_C33795_009_S611754_KV11_NF54_AP2G-GFP_neg_AC.raw... reading index for 20240103_C33795_014_S611750_KV7_NF54_AP2G-GFP_pos_AC.raw... reading index for 20240103_C33795_021_S611755_KV12_NF54_AP2G-GFP_neg_AC.raw... reading index for 20240103_C33795_005_S611762_KV19_NF54_MSRP1-mNG_pos_AC.raw... reading index for 20240103_C33795_003_S611766_KV23_NF54_MSRP1-mNG_neg_AC.raw... reading index for 20240103_C33795_025_S611751_KV8_NF54_AP2G-GFP_pos_AC.raw... reading index for 20240103_C33795_030_S611764_KV21_NF54_MSRP1-mNG_pos_AC.raw... reading index for 20240103_C33795_032_S611765_KV22_NF54_MSRP1-mNG_neg_AC.raw... reading index for 20240103_C33795_015_S611767_KV24_NF54_MSRP1-mNG_neg_AC.raw... reading index for 20240103_C33795_008_S611752_KV9_NF54_AP2G-GFP_pos_AC.raw... reading index for 20240103_C33795_019_S611753_KV10_NF54_AP2G-GFP_neg_AC.raw... reading index for 20240103_C33795_007_S611763_KV20_NF54_MSRP1-mNG_pos_AC.raw... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... resourcesSelected: /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_009_S611754_KV11_NF54_AP2G-GFP_neg_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_014_S611750_KV7_NF54_AP2G-GFP_pos_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_021_S611755_KV12_NF54_AP2G-GFP_neg_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_005_S611762_KV19_NF54_MSRP1-mNG_pos_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_003_S611766_KV23_NF54_MSRP1-mNG_neg_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_025_S611751_KV8_NF54_AP2G-GFP_pos_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_030_S611764_KV21_NF54_MSRP1-mNG_pos_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_032_S611765_KV22_NF54_MSRP1-mNG_neg_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_015_S611767_KV24_NF54_MSRP1-mNG_neg_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_008_S611752_KV9_NF54_AP2G-GFP_pos_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_019_S611753_KV10_NF54_AP2G-GFP_neg_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_007_S611763_KV20_NF54_MSRP1-mNG_pos_AC.raw vals$rawfile: /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_009_S611754_KV11_NF54_AP2G-GFP_neg_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_014_S611750_KV7_NF54_AP2G-GFP_pos_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_021_S611755_KV12_NF54_AP2G-GFP_neg_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_005_S611762_KV19_NF54_MSRP1-mNG_pos_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_003_S611766_KV23_NF54_MSRP1-mNG_neg_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_025_S611751_KV8_NF54_AP2G-GFP_pos_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_030_S611764_KV21_NF54_MSRP1-mNG_pos_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_032_S611765_KV22_NF54_MSRP1-mNG_neg_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_015_S611767_KV24_NF54_MSRP1-mNG_neg_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_008_S611752_KV9_NF54_AP2G-GFP_pos_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_019_S611753_KV10_NF54_AP2G-GFP_neg_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_007_S611763_KV20_NF54_MSRP1-mNG_pos_AC.raw ggplot2::ggsave to file /tmp/Rtmp1cwcP3/rawDiag_20240105-104215_plotTicBasepeak.pdf Warning: Error in +: non-numeric argument to binary operator 1: runApp plotChargeState output$employee <- renderUI({ read bfabricposturl https://fgcz-c-072.uzh.ch:5000/. Warning in .read(login = login, webservicepassword = webservicepassword, : query failed. bfabricConnectionWorking FALSE saving 'login and webservicepassword' ... output$employee <- renderUI({ bfabricConnectionWorking TRUE 'empdegree' found. saving 'login and webservicepassword' ... plotTicBasepeak saving 'login and webservicepassword' ... saving 'login and webservicepassword' ... resourcesSelected: /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_009_S611754_KV11_NF54_AP2G-GFP_neg_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_014_S611750_KV7_NF54_AP2G-GFP_pos_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_021_S611755_KV12_NF54_AP2G-GFP_neg_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_005_S611762_KV19_NF54_MSRP1-mNG_pos_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_003_S611766_KV23_NF54_MSRP1-mNG_neg_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_025_S611751_KV8_NF54_AP2G-GFP_pos_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_030_S611764_KV21_NF54_MSRP1-mNG_pos_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_032_S611765_KV22_NF54_MSRP1-mNG_neg_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_015_S611767_KV24_NF54_MSRP1-mNG_neg_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_008_S611752_KV9_NF54_AP2G-GFP_pos_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_019_S611753_KV10_NF54_AP2G-GFP_neg_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_007_S611763_KV20_NF54_MSRP1-mNG_pos_AC.raw vals$rawfile: /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_009_S611754_KV11_NF54_AP2G-GFP_neg_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_014_S611750_KV7_NF54_AP2G-GFP_pos_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_021_S611755_KV12_NF54_AP2G-GFP_neg_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_005_S611762_KV19_NF54_MSRP1-mNG_pos_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_003_S611766_KV23_NF54_MSRP1-mNG_neg_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_025_S611751_KV8_NF54_AP2G-GFP_pos_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_030_S611764_KV21_NF54_MSRP1-mNG_pos_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_032_S611765_KV22_NF54_MSRP1-mNG_neg_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_015_S611767_KV24_NF54_MSRP1-mNG_neg_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_008_S611752_KV9_NF54_AP2G-GFP_pos_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_019_S611753_KV10_NF54_AP2G-GFP_neg_AC.raw, /srv/www/htdocs//p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_007_S611763_KV20_NF54_MSRP1-mNG_pos_AC.raw reading index for 20240103_C33795_009_S611754_KV11_NF54_AP2G-GFP_neg_AC.raw... reading index for 20240103_C33795_014_S611750_KV7_NF54_AP2G-GFP_pos_AC.raw... reading index for 20240103_C33795_021_S611755_KV12_NF54_AP2G-GFP_neg_AC.raw... reading index for 20240103_C33795_005_S611762_KV19_NF54_MSRP1-mNG_pos_AC.raw... reading index for 20240103_C33795_003_S611766_KV23_NF54_MSRP1-mNG_neg_AC.raw... reading index for 20240103_C33795_025_S611751_KV8_NF54_AP2G-GFP_pos_AC.raw... reading index for 20240103_C33795_030_S611764_KV21_NF54_MSRP1-mNG_pos_AC.raw... reading index for 20240103_C33795_032_S611765_KV22_NF54_MSRP1-mNG_neg_AC.raw... reading index for 20240103_C33795_015_S611767_KV24_NF54_MSRP1-mNG_neg_AC.raw... reading index for 20240103_C33795_008_S611752_KV9_NF54_AP2G-GFP_pos_AC.raw... reading index for 20240103_C33795_019_S611753_KV10_NF54_AP2G-GFP_neg_AC.raw... reading index for 20240103_C33795_007_S611763_KV20_NF54_MSRP1-mNG_pos_AC.raw... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... ggplot2::ggsave to file /tmp/Rtmp1cwcP3/rawDiag_20240105-104506_plotTicBasepeak.pdf saving 'login and webservicepassword' ... The current plot is available as workunit 298309. Rendering actionButton to link workunit 298309 in B-Fabric. saving 'login and webservicepassword' ... Execution halted