Listening on http://127.0.0.1:39839
Loading required package: rawDiag
Loading required package: bfabricShiny

Attaching package: 'bfabricShiny'

The following object is masked from 'package:base':

    save

plotTicBasepeak
output$employee <- renderUI({
read bfabricposturl https://fgcz-c-072.uzh.ch:5000/.
Warning in .read(login = login, webservicepassword = webservicepassword,  :
  query failed.
bfabricConnectionWorking FALSE
saving 'login and webservicepassword' ...
output$employee <- renderUI({
bfabricConnectionWorking TRUE
'empdegree' found.
saving 'login and webservicepassword' ...
saving 'login and webservicepassword' ...
saving 'login and webservicepassword' ...
resourcesSelected: /srv/www/htdocs//p33996/Proteomics/EXPLORIS_2/analytic_20240119/20240119_C33996_003_S625983_VIA1mCit-1_Group_1.raw, /srv/www/htdocs//p33996/Proteomics/EXPLORIS_2/analytic_20240119/20240119_C33996_004_S625984_VIA1mCit-2_Group_1.raw, /srv/www/htdocs//p33996/Proteomics/EXPLORIS_2/analytic_20240119/20240119_C33996_002_S625982_mCitrine_Control.raw
vals$rawfile: /srv/www/htdocs//p33996/Proteomics/EXPLORIS_2/analytic_20240119/20240119_C33996_003_S625983_VIA1mCit-1_Group_1.raw,
	/srv/www/htdocs//p33996/Proteomics/EXPLORIS_2/analytic_20240119/20240119_C33996_004_S625984_VIA1mCit-2_Group_1.raw,
	/srv/www/htdocs//p33996/Proteomics/EXPLORIS_2/analytic_20240119/20240119_C33996_002_S625982_mCitrine_Control.raw
reading index for 20240119_C33996_003_S625983_VIA1mCit-1_Group_1.raw...
reading index for 20240119_C33996_004_S625984_VIA1mCit-2_Group_1.raw...
reading index for 20240119_C33996_002_S625982_mCitrine_Control.raw...
determining ElapsedScanTimesec ...
reading trailer LM m/z-Correction (ppm) ...
determining ElapsedScanTimesec ...
reading trailer LM m/z-Correction (ppm) ...
determining ElapsedScanTimesec ...
reading trailer LM m/z-Correction (ppm) ...
reading trailer AGC ...
reading trailer AGC ...
reading trailer AGC ...
reading trailer AGC PS Mode ...
reading trailer AGC PS Mode ...
reading trailer AGC PS Mode ...
reading trailer FT Resolution ...
reading trailer FT Resolution ...
reading trailer FT Resolution ...
reading trailer Ion Injection Time (ms) ...
reading trailer Ion Injection Time (ms) ...
reading trailer Ion Injection Time (ms) ...
reading TIC ...
reading TIC ...
reading TIC ...
reading BasePeakIntensity ...
reading BasePeakIntensity ...
reading BasePeakIntensity ...
ggplot2::ggsave to file /tmp/RtmpYdJOm9/rawDiag_20240123-120912_plotTicBasepeak.pdf
saving 'login and webservicepassword' ...
The current plot is available as workunit 298832.
Rendering actionButton to link workunit 298832 in B-Fabric.
saving 'login and webservicepassword' ...
plotLockMassCorrection
ggplot2::ggsave to file /tmp/RtmpYdJOm9/rawDiag_20240123-120935_plotLockMassCorrection.pdf
The current plot is available as workunit 298833.
Rendering actionButton to link workunit 298833 in B-Fabric.
plotInjectionTime
ggplot2::ggsave to file /tmp/RtmpYdJOm9/rawDiag_20240123-121006_plotInjectionTime.pdf
The current plot is available as workunit 298834.
Rendering actionButton to link workunit 298834 in B-Fabric.
plotPrecursorHeatmap
ggplot2::ggsave to file /tmp/RtmpYdJOm9/rawDiag_20240123-121110_plotPrecursorHeatmap.pdf
The current plot is available as workunit 298835.
Rendering actionButton to link workunit 298835 in B-Fabric.
Rendering actionButton to link workunit 298835 in B-Fabric.


Execution halted