Listening on http://127.0.0.1:42573 Loading required package: rawDiag Loading required package: bfabricShiny Attaching package: 'bfabricShiny' The following object is masked from 'package:base': save plotChargeState output$employee <- renderUI({ read bfabricposturl https://fgcz-c-072.uzh.ch:5000/. Warning in .read(login = login, webservicepassword = webservicepassword, : query failed. bfabricConnectionWorking FALSE saving 'login and webservicepassword' ... output$employee <- renderUI({ bfabricConnectionWorking TRUE 'empdegree' found. Warning in shinyStore::updateStore(session, "login", isolate(input$login), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "webservicepassword", isolate(input$webservicepassword), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "project", isolate(input$project), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "login", isolate(input$login), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "webservicepassword", isolate(input$webservicepassword), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "project", isolate(input$project), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "login", isolate(input$login), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "webservicepassword", isolate(input$webservicepassword), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "project", isolate(input$project), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "login", isolate(input$login), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "webservicepassword", isolate(input$webservicepassword), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "project", isolate(input$project), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. resourcesSelected: /srv/www/htdocs//p34203/Proteomics/LUMOS_2/analytic_20240212/20240212_C34203_007_S636607_SN3_ENP1_1_Group_1.raw, /srv/www/htdocs//p34203/Proteomics/LUMOS_2/analytic_20240212/20240212_C34203_009_S636609_SN3_ENP1_3_Group_1.raw, /srv/www/htdocs//p34203/Proteomics/LUMOS_2/analytic_20240212/20240212_C34203_008_S636608_SN3_ENP1_2_Group_1.raw, /srv/www/htdocs//p34203/Proteomics/LUMOS_2/analytic_20240212/20240212_C34203_003_S636605_SN3_control_2_Control.raw, /srv/www/htdocs//p34203/Proteomics/LUMOS_2/analytic_20240212/20240212_C34203_004_S636606_SN3_control_3_Control.raw, /srv/www/htdocs//p34203/Proteomics/LUMOS_2/analytic_20240212/20240212_C34203_002re_S636604_SN3_control_1_Control.raw vals$rawfile: /srv/www/htdocs//p34203/Proteomics/LUMOS_2/analytic_20240212/20240212_C34203_007_S636607_SN3_ENP1_1_Group_1.raw, /srv/www/htdocs//p34203/Proteomics/LUMOS_2/analytic_20240212/20240212_C34203_009_S636609_SN3_ENP1_3_Group_1.raw, /srv/www/htdocs//p34203/Proteomics/LUMOS_2/analytic_20240212/20240212_C34203_008_S636608_SN3_ENP1_2_Group_1.raw, /srv/www/htdocs//p34203/Proteomics/LUMOS_2/analytic_20240212/20240212_C34203_003_S636605_SN3_control_2_Control.raw, /srv/www/htdocs//p34203/Proteomics/LUMOS_2/analytic_20240212/20240212_C34203_004_S636606_SN3_control_3_Control.raw, /srv/www/htdocs//p34203/Proteomics/LUMOS_2/analytic_20240212/20240212_C34203_002re_S636604_SN3_control_1_Control.raw reading index for 20240212_C34203_007_S636607_SN3_ENP1_1_Group_1.raw... reading index for 20240212_C34203_009_S636609_SN3_ENP1_3_Group_1.raw... reading index for 20240212_C34203_008_S636608_SN3_ENP1_2_Group_1.raw... reading index for 20240212_C34203_003_S636605_SN3_control_2_Control.raw... reading index for 20240212_C34203_004_S636606_SN3_control_3_Control.raw... reading index for 20240212_C34203_002re_S636604_SN3_control_1_Control.raw... determining ElapsedScanTimesec ... reading trailer AGC ... determining ElapsedScanTimesec ... reading trailer AGC ... determining ElapsedScanTimesec ... reading trailer AGC ... determining ElapsedScanTimesec ... reading trailer AGC ... determining ElapsedScanTimesec ... reading trailer AGC ... determining ElapsedScanTimesec ... reading trailer AGC ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... Warning in validate_read.raw(rawrrIndex) : Missing column FTResolution. Warning in validate_read.raw(rawrrIndex) : Missing column LMCorrection. Warning in validate_read.raw(rawrrIndex) : Missing column PrescanMode. Warning in validate_read.raw(rawrrIndex) : Missing column FTResolution. Warning in validate_read.raw(rawrrIndex) : Missing column LMCorrection. Warning in validate_read.raw(rawrrIndex) : Missing column PrescanMode. Warning in validate_read.raw(rawrrIndex) : Missing column FTResolution. Warning in validate_read.raw(rawrrIndex) : Missing column LMCorrection. Warning in validate_read.raw(rawrrIndex) : Missing column PrescanMode. Warning in validate_read.raw(rawrrIndex) : Missing column FTResolution. Warning in validate_read.raw(rawrrIndex) : Missing column LMCorrection. Warning in validate_read.raw(rawrrIndex) : Missing column PrescanMode. Warning in validate_read.raw(rawrrIndex) : Missing column FTResolution. Warning in validate_read.raw(rawrrIndex) : Missing column LMCorrection. Warning in validate_read.raw(rawrrIndex) : Missing column PrescanMode. Warning in validate_read.raw(rawrrIndex) : Missing column FTResolution. Warning in validate_read.raw(rawrrIndex) : Missing column LMCorrection. Warning in validate_read.raw(rawrrIndex) : Missing column PrescanMode. plotTicBasepeak ggplot2::ggsave to file /tmp/Rtmpncf6kZ/rawDiag_20240214-083153_plotTicBasepeak.pdf Warning in shinyStore::updateStore(session, "login", isolate(input$login), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "webservicepassword", isolate(input$webservicepassword), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "project", isolate(input$project), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. The current plot is available as workunit 299770. Rendering actionButton to link workunit 299770 in B-Fabric. Warning in shinyStore::updateStore(session, "login", isolate(input$login), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "webservicepassword", isolate(input$webservicepassword), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "project", isolate(input$project), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Execution halted