Listening on http://127.0.0.1:36441 Loading required package: rawDiag Loading required package: bfabricShiny Attaching package: 'bfabricShiny' The following object is masked from 'package:base': save plotTicBasepeak output$employee <- renderUI({ read bfabricposturl https://fgcz-c-072.uzh.ch:5000/. Warning in .read(login = login, webservicepassword = webservicepassword, : query failed. bfabricConnectionWorking FALSE saving 'login and webservicepassword' ... output$employee <- renderUI({ bfabricConnectionWorking TRUE 'empdegree' found. saving 'login and webservicepassword' ... saving 'login and webservicepassword' ... saving 'login and webservicepassword' ... resourcesSelected: /srv/www/htdocs//p34223/Proteomics/EXPLORIS_1/analytic_20240215/20240215_C34223_004_S639035_LF150-2KLF4_Group_2.raw, /srv/www/htdocs//p34223/Proteomics/EXPLORIS_1/analytic_20240215/20240215_C34223_010_S639036_LF150-3rIgG_Group_1.raw, /srv/www/htdocs//p34223/Proteomics/EXPLORIS_1/analytic_20240215/20240215_C34223_007_S639037_LF150-3KLF4_Group_2.raw, /srv/www/htdocs//p34223/Proteomics/EXPLORIS_1/analytic_20240215/20240215_C34223_002_S639034_LF150-2rIgG_Group_1.raw, /srv/www/htdocs//p34223/Proteomics/EXPLORIS_1/analytic_20240215/20240215_C34223_012_S639043_LF150-7KLF4_Group_4.raw, /srv/www/htdocs//p34223/Proteomics/EXPLORIS_1/analytic_20240215/20240215_C34223_013_S639040_LF150-6rIgG_Group_3.raw, /srv/www/htdocs//p34223/Proteomics/EXPLORIS_1/analytic_20240215/20240215_C34223_015_S639038_LF150-4rIgG_Group_1.raw, /srv/www/htdocs//p34223/Proteomics/EXPLORIS_1/analytic_20240215/20240215_C34223_006_S639044_LF150-8rIgG_Group_3.raw, /srv/www/htdocs//p34223/Proteomics/EXPLORIS_1/analytic_20240215/20240215_C34223_003_S639042_LF150-7rIgG_Group_3.raw, /srv/www/htdocs//p34223/Proteomics/EXPLORIS_1/analytic_20240215/20240215_C34223_005_S639041_LF150-6KLF4_Group_4.raw, /srv/www/htdocs//p34223/Proteomics/EXPLORIS_1/analytic_20240215/20240215_C34223_011_S639045_LF150-8KLF4_Group_4.raw, /srv/www/htdocs//p34223/Proteomics/EXPLORIS_1/analytic_20240215/20240215_C34223_014_S639039_LF150-4KLF4_Group_2.raw vals$rawfile: /srv/www/htdocs//p34223/Proteomics/EXPLORIS_1/analytic_20240215/20240215_C34223_004_S639035_LF150-2KLF4_Group_2.raw, /srv/www/htdocs//p34223/Proteomics/EXPLORIS_1/analytic_20240215/20240215_C34223_010_S639036_LF150-3rIgG_Group_1.raw, /srv/www/htdocs//p34223/Proteomics/EXPLORIS_1/analytic_20240215/20240215_C34223_007_S639037_LF150-3KLF4_Group_2.raw, /srv/www/htdocs//p34223/Proteomics/EXPLORIS_1/analytic_20240215/20240215_C34223_002_S639034_LF150-2rIgG_Group_1.raw, /srv/www/htdocs//p34223/Proteomics/EXPLORIS_1/analytic_20240215/20240215_C34223_012_S639043_LF150-7KLF4_Group_4.raw, /srv/www/htdocs//p34223/Proteomics/EXPLORIS_1/analytic_20240215/20240215_C34223_013_S639040_LF150-6rIgG_Group_3.raw, /srv/www/htdocs//p34223/Proteomics/EXPLORIS_1/analytic_20240215/20240215_C34223_015_S639038_LF150-4rIgG_Group_1.raw, /srv/www/htdocs//p34223/Proteomics/EXPLORIS_1/analytic_20240215/20240215_C34223_006_S639044_LF150-8rIgG_Group_3.raw, /srv/www/htdocs//p34223/Proteomics/EXPLORIS_1/analytic_20240215/20240215_C34223_003_S639042_LF150-7rIgG_Group_3.raw, /srv/www/htdocs//p34223/Proteomics/EXPLORIS_1/analytic_20240215/20240215_C34223_005_S639041_LF150-6KLF4_Group_4.raw, /srv/www/htdocs//p34223/Proteomics/EXPLORIS_1/analytic_20240215/20240215_C34223_011_S639045_LF150-8KLF4_Group_4.raw, /srv/www/htdocs//p34223/Proteomics/EXPLORIS_1/analytic_20240215/20240215_C34223_014_S639039_LF150-4KLF4_Group_2.raw reading index for 20240215_C34223_004_S639035_LF150-2KLF4_Group_2.raw... reading index for 20240215_C34223_010_S639036_LF150-3rIgG_Group_1.raw... reading index for 20240215_C34223_007_S639037_LF150-3KLF4_Group_2.raw... reading index for 20240215_C34223_002_S639034_LF150-2rIgG_Group_1.raw... reading index for 20240215_C34223_012_S639043_LF150-7KLF4_Group_4.raw... reading index for 20240215_C34223_013_S639040_LF150-6rIgG_Group_3.raw... reading index for 20240215_C34223_015_S639038_LF150-4rIgG_Group_1.raw... reading index for 20240215_C34223_006_S639044_LF150-8rIgG_Group_3.raw... reading index for 20240215_C34223_003_S639042_LF150-7rIgG_Group_3.raw... reading index for 20240215_C34223_005_S639041_LF150-6KLF4_Group_4.raw... reading index for 20240215_C34223_011_S639045_LF150-8KLF4_Group_4.raw... reading index for 20240215_C34223_014_S639039_LF150-4KLF4_Group_2.raw... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... ggplot2::ggsave to file /tmp/RtmpMBZbAW/rawDiag_20240220-125159_plotTicBasepeak.pdf saving 'login and webservicepassword' ... The current plot is available as workunit 300093. Rendering actionButton to link workunit 300093 in B-Fabric. saving 'login and webservicepassword' ... plotLockMassCorrection Rendering actionButton to link workunit 300093 in B-Fabric. ggplot2::ggsave to file /tmp/RtmpMBZbAW/rawDiag_20240220-125241_plotLockMassCorrection.pdf The current plot is available as workunit 300094. Rendering actionButton to link workunit 300094 in B-Fabric. plotInjectionTime Rendering actionButton to link workunit 300094 in B-Fabric. ggplot2::ggsave to file /tmp/RtmpMBZbAW/rawDiag_20240220-125357_plotInjectionTime.pdf The current plot is available as workunit 300095. Rendering actionButton to link workunit 300095 in B-Fabric. plotMzDistribution Rendering actionButton to link workunit 300095 in B-Fabric. plotPrecursorHeatmap plotTicBasepeak ggplot2::ggsave to file /tmp/RtmpMBZbAW/rawDiag_20240220-125657_plotTicBasepeak.pdf The current plot is available as workunit 300096. Rendering actionButton to link workunit 300096 in B-Fabric. Rendering actionButton to link workunit 300096 in B-Fabric. Execution halted