Listening on http://127.0.0.1:33867 Loading required package: rawDiag Loading required package: bfabricShiny Attaching package: 'bfabricShiny' The following object is masked from 'package:base': save plotChargeState output$employee <- renderUI({ read bfabricposturl https://fgcz-c-072.uzh.ch:5000/. Warning in .read(login = login, webservicepassword = webservicepassword, : query failed. bfabricConnectionWorking FALSE saving 'login and webservicepassword' ... output$employee <- renderUI({ Warning in .read(login = login, webservicepassword = webservicepassword, : query failed. bfabricConnectionWorking FALSE output$employee <- renderUI({ bfabricConnectionWorking TRUE 'empdegree' found. Warning in shinyStore::updateStore(session, "login", isolate(input$login), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "webservicepassword", isolate(input$webservicepassword), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "project", isolate(input$project), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "login", isolate(input$login), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "webservicepassword", isolate(input$webservicepassword), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "project", isolate(input$project), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "login", isolate(input$login), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "webservicepassword", isolate(input$webservicepassword), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "project", isolate(input$project), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "login", isolate(input$login), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "webservicepassword", isolate(input$webservicepassword), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "project", isolate(input$project), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. resourcesSelected: /srv/www/htdocs//p34343/Proteomics/FUSION_2/giostrazza_20240220_omics_course/20240220_003_S642719_E1_GIO_EtOH.raw, /srv/www/htdocs//p34343/Proteomics/FUSION_2/giostrazza_20240220_omics_course/20240220_004_S642716_G2_GIO_Gluc.raw, /srv/www/htdocs//p34343/Proteomics/FUSION_2/giostrazza_20240220_omics_course/20240220_006_S642720_E1_XH_EtOH.raw, /srv/www/htdocs//p34343/Proteomics/FUSION_2/giostrazza_20240220_omics_course/20240220_002_S642715_G2_JD_Gluc.raw, /srv/www/htdocs//p34343/Proteomics/FUSION_2/giostrazza_20240220_omics_course/20240220_007_S642714_G1_Olivia_Gluc.raw vals$rawfile: /srv/www/htdocs//p34343/Proteomics/FUSION_2/giostrazza_20240220_omics_course/20240220_003_S642719_E1_GIO_EtOH.raw, /srv/www/htdocs//p34343/Proteomics/FUSION_2/giostrazza_20240220_omics_course/20240220_004_S642716_G2_GIO_Gluc.raw, /srv/www/htdocs//p34343/Proteomics/FUSION_2/giostrazza_20240220_omics_course/20240220_006_S642720_E1_XH_EtOH.raw, /srv/www/htdocs//p34343/Proteomics/FUSION_2/giostrazza_20240220_omics_course/20240220_002_S642715_G2_JD_Gluc.raw, /srv/www/htdocs//p34343/Proteomics/FUSION_2/giostrazza_20240220_omics_course/20240220_007_S642714_G1_Olivia_Gluc.raw reading index for 20240220_003_S642719_E1_GIO_EtOH.raw... reading index for 20240220_004_S642716_G2_GIO_Gluc.raw... reading index for 20240220_006_S642720_E1_XH_EtOH.raw... reading index for 20240220_002_S642715_G2_JD_Gluc.raw... reading index for 20240220_007_S642714_G1_Olivia_Gluc.raw... determining ElapsedScanTimesec ... reading trailer AGC ... determining ElapsedScanTimesec ... determining ElapsedScanTimesec ... reading trailer AGC ... reading trailer AGC ... determining ElapsedScanTimesec ... reading trailer AGC ... determining ElapsedScanTimesec ... reading trailer AGC ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading BasePeakIntensity ... Warning in validate_read.raw(rawrrIndex) : Missing column FTResolution. Warning in validate_read.raw(rawrrIndex) : Missing column LMCorrection. Warning in validate_read.raw(rawrrIndex) : Missing column PrescanMode. reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... Warning in validate_read.raw(rawrrIndex) : Missing column FTResolution. Warning in validate_read.raw(rawrrIndex) : Missing column LMCorrection. Warning in validate_read.raw(rawrrIndex) : Missing column PrescanMode. Warning in validate_read.raw(rawrrIndex) : Missing column FTResolution. Warning in validate_read.raw(rawrrIndex) : Missing column LMCorrection. Warning in validate_read.raw(rawrrIndex) : Missing column PrescanMode. Warning in validate_read.raw(rawrrIndex) : Missing column FTResolution. Warning in validate_read.raw(rawrrIndex) : Missing column LMCorrection. Warning in validate_read.raw(rawrrIndex) : Missing column PrescanMode. Warning in validate_read.raw(rawrrIndex) : Missing column FTResolution. Warning in validate_read.raw(rawrrIndex) : Missing column LMCorrection. Warning in validate_read.raw(rawrrIndex) : Missing column PrescanMode. `geom_smooth()` using formula = 'y ~ x' plotCycleLoad plotInjectionTime Warning: Error in dplyr::mutate: ℹ In argument: `transient = dplyr::case_when(...)`. Caused by error in `dplyr::case_when()`: ! Failed to evaluate the left-hand side of formula 1. Caused by error: ! object 'FTResolution' not found 202: 201: signalCondition 200: signal_abort 199: abort 198: 197: signalCondition 196: signal_abort 195: abort 194: h 193: .handleSimpleError 192: eval_tidy 190: case_formula_evaluate 189: dplyr::case_when 188: eval 187: mask$eval_all_mutate 186: mutate_col 184: mutate_cols 183: mutate.data.frame 181: .calcTransient 170: plotScanTime 168: renderPlot 166: func 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$OrbitrapFun02-plot 1: runApp plotScanTime plotTicBasepeak ggplot2::ggsave to file /tmp/Rtmp0cJRcA/rawDiag_20240221-095321_plotTicBasepeak.pdf Warning in shinyStore::updateStore(session, "login", isolate(input$login), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "webservicepassword", isolate(input$webservicepassword), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "project", isolate(input$project), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in resources$relativepath == input$relativepath : longer object length is not a multiple of shorter object length The current plot is available as workunit 300126. Rendering actionButton to link workunit 300126 in B-Fabric. Warning in shinyStore::updateStore(session, "login", isolate(input$login), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "webservicepassword", isolate(input$webservicepassword), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "project", isolate(input$project), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. plotChargeState output$employee <- renderUI({ read bfabricposturl https://fgcz-c-072.uzh.ch:5000/. Warning in .read(login = login, webservicepassword = webservicepassword, : query failed. bfabricConnectionWorking FALSE saving 'login and webservicepassword' ... output$employee <- renderUI({ bfabricConnectionWorking TRUE 'empdegree' found. saving 'login and webservicepassword' ... plotTicBasepeak output$employee <- renderUI({ read bfabricposturl https://fgcz-c-072.uzh.ch:5000/. Warning in .read(login = login, webservicepassword = webservicepassword, : query failed. bfabricConnectionWorking FALSE saving 'login and webservicepassword' ... output$employee <- renderUI({ bfabricConnectionWorking TRUE 'empdegree' found. saving 'login and webservicepassword' ... saving 'login and webservicepassword' ... saving 'login and webservicepassword' ... resourcesSelected: /srv/www/htdocs//p34262/Proteomics/EXPLORIS_1/analytic_20240215/20240215_C34262_003_S640175_WT_W559_2_Control.raw, /srv/www/htdocs//p34262/Proteomics/EXPLORIS_1/analytic_20240215/20240215_C34262_007_S640179_WT_W559_uv3_Sample.raw, /srv/www/htdocs//p34262/Proteomics/EXPLORIS_1/analytic_20240215/20240215_C34262_002_S640177_WT_W559_uv1_Sample.raw, /srv/www/htdocs//p34262/Proteomics/EXPLORIS_1/analytic_20240215/20240215_C34262_006_S640174_WT_W559_1_Control.raw, /srv/www/htdocs//p34262/Proteomics/EXPLORIS_1/analytic_20240215/20240215_C34262_005_S640176_WT_W559_3_Control.raw, /srv/www/htdocs//p34262/Proteomics/EXPLORIS_1/analytic_20240215/20240215_C34262_004_S640178_WT_W559_uv2_Sample.raw vals$rawfile: /srv/www/htdocs//p34262/Proteomics/EXPLORIS_1/analytic_20240215/20240215_C34262_003_S640175_WT_W559_2_Control.raw, /srv/www/htdocs//p34262/Proteomics/EXPLORIS_1/analytic_20240215/20240215_C34262_007_S640179_WT_W559_uv3_Sample.raw, /srv/www/htdocs//p34262/Proteomics/EXPLORIS_1/analytic_20240215/20240215_C34262_002_S640177_WT_W559_uv1_Sample.raw, /srv/www/htdocs//p34262/Proteomics/EXPLORIS_1/analytic_20240215/20240215_C34262_006_S640174_WT_W559_1_Control.raw, /srv/www/htdocs//p34262/Proteomics/EXPLORIS_1/analytic_20240215/20240215_C34262_005_S640176_WT_W559_3_Control.raw, /srv/www/htdocs//p34262/Proteomics/EXPLORIS_1/analytic_20240215/20240215_C34262_004_S640178_WT_W559_uv2_Sample.raw reading index for 20240215_C34262_003_S640175_WT_W559_2_Control.raw... reading index for 20240215_C34262_007_S640179_WT_W559_uv3_Sample.raw... reading index for 20240215_C34262_002_S640177_WT_W559_uv1_Sample.raw... reading index for 20240215_C34262_006_S640174_WT_W559_1_Control.raw... reading index for 20240215_C34262_005_S640176_WT_W559_3_Control.raw... reading index for 20240215_C34262_004_S640178_WT_W559_uv2_Sample.raw... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... ggplot2::ggsave to file /tmp/Rtmp0cJRcA/rawDiag_20240223-093030_plotTicBasepeak.pdf saving 'login and webservicepassword' ... The current plot is available as workunit 300266. Rendering actionButton to link workunit 300266 in B-Fabric. saving 'login and webservicepassword' ... Rendering actionButton to link workunit 300266 in B-Fabric. ggplot2::ggsave to file /tmp/Rtmp0cJRcA/rawDiag_20240223-093101_plotTicBasepeak.pdf ggplot2::ggsave to file /tmp/Rtmp0cJRcA/rawDiag_20240223-093116_plotTicBasepeak.pdf ggplot2::ggsave to file /tmp/Rtmp0cJRcA/rawDiag_20240223-093142_plotTicBasepeak.pdf plotLockMassCorrection ggplot2::ggsave to file /tmp/Rtmp0cJRcA/rawDiag_20240223-093205_plotLockMassCorrection.pdf The current plot is available as workunit 300267. Rendering actionButton to link workunit 300267 in B-Fabric. plotInjectionTime ggplot2::ggsave to file /tmp/Rtmp0cJRcA/rawDiag_20240223-093230_plotInjectionTime.pdf The current plot is available as workunit 300268. Rendering actionButton to link workunit 300268 in B-Fabric. plotTicBasepeak ggplot2::ggsave to file /tmp/Rtmp0cJRcA/rawDiag_20240223-093254_plotTicBasepeak.pdf The current plot is available as workunit 300269. Rendering actionButton to link workunit 300269 in B-Fabric. resourcesSelected: /srv/www/htdocs//p34263/Proteomics/EXPLORIS_1/analytic_20240215/20240215_C34263_005_S640181_D_Y108_2_Control.raw, /srv/www/htdocs//p34263/Proteomics/EXPLORIS_1/analytic_20240215/20240215_C34263_002_S640184_D_Y108_uv2_Sample.raw, /srv/www/htdocs//p34263/Proteomics/EXPLORIS_1/analytic_20240215/20240215_C34263_006_S640185_D_Y108_uv3_Sample.raw, /srv/www/htdocs//p34263/Proteomics/EXPLORIS_1/analytic_20240215/20240215_C34263_003_S640180_D_Y108_1_Control.raw, /srv/www/htdocs//p34263/Proteomics/EXPLORIS_1/analytic_20240215/20240215_C34263_004_S640183_D_Y108_uv1_Sample.raw, /srv/www/htdocs//p34263/Proteomics/EXPLORIS_1/analytic_20240215/20240215_C34263_007_S640182_D_Y108_3_Control.raw vals$rawfile: /srv/www/htdocs//p34263/Proteomics/EXPLORIS_1/analytic_20240215/20240215_C34263_005_S640181_D_Y108_2_Control.raw, /srv/www/htdocs//p34263/Proteomics/EXPLORIS_1/analytic_20240215/20240215_C34263_002_S640184_D_Y108_uv2_Sample.raw, /srv/www/htdocs//p34263/Proteomics/EXPLORIS_1/analytic_20240215/20240215_C34263_006_S640185_D_Y108_uv3_Sample.raw, /srv/www/htdocs//p34263/Proteomics/EXPLORIS_1/analytic_20240215/20240215_C34263_003_S640180_D_Y108_1_Control.raw, /srv/www/htdocs//p34263/Proteomics/EXPLORIS_1/analytic_20240215/20240215_C34263_004_S640183_D_Y108_uv1_Sample.raw, /srv/www/htdocs//p34263/Proteomics/EXPLORIS_1/analytic_20240215/20240215_C34263_007_S640182_D_Y108_3_Control.raw reading index for 20240215_C34263_005_S640181_D_Y108_2_Control.raw... reading index for 20240215_C34263_002_S640184_D_Y108_uv2_Sample.raw... reading index for 20240215_C34263_006_S640185_D_Y108_uv3_Sample.raw... reading index for 20240215_C34263_003_S640180_D_Y108_1_Control.raw... reading index for 20240215_C34263_004_S640183_D_Y108_uv1_Sample.raw... reading index for 20240215_C34263_007_S640182_D_Y108_3_Control.raw... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... ggplot2::ggsave to file /tmp/Rtmp0cJRcA/rawDiag_20240223-122413_plotTicBasepeak.pdf The current plot is available as workunit 300291. Rendering actionButton to link workunit 300291 in B-Fabric. plotLockMassCorrection ggplot2::ggsave to file /tmp/Rtmp0cJRcA/rawDiag_20240223-122436_plotLockMassCorrection.pdf The current plot is available as workunit 300292. Rendering actionButton to link workunit 300292 in B-Fabric. plotInjectionTime plotTicBasepeak plotMassDistribution plotLockMassCorrection plotInjectionTime ggplot2::ggsave to file /tmp/Rtmp0cJRcA/rawDiag_20240223-122719_plotInjectionTime.pdf The current plot is available as workunit 300295. Rendering actionButton to link workunit 300295 in B-Fabric. Rendering actionButton to link workunit 300295 in B-Fabric. plotInjectionTime output$employee <- renderUI({ read bfabricposturl https://fgcz-c-072.uzh.ch:5000/. Warning in .read(login = login, webservicepassword = webservicepassword, : query failed. bfabricConnectionWorking FALSE saving 'login and webservicepassword' ... output$employee <- renderUI({ bfabricConnectionWorking TRUE 'empdegree' found. saving 'login and webservicepassword' ... plotChargeState output$employee <- renderUI({ read bfabricposturl https://fgcz-c-072.uzh.ch:5000/. Warning in .read(login = login, webservicepassword = webservicepassword, : query failed. bfabricConnectionWorking FALSE saving 'login and webservicepassword' ... Warning in .read(login = login, webservicepassword = webservicepassword, : query failed. bfabricConnectionWorking FALSE output$employee <- renderUI({ bfabricConnectionWorking TRUE Warning in shinyStore::updateStore(session, "login", isolate(input$login), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "webservicepassword", isolate(input$webservicepassword), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "project", isolate(input$project), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "login", isolate(input$login), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "webservicepassword", isolate(input$webservicepassword), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "project", isolate(input$project), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. plotChargeState output$employee <- renderUI({ read bfabricposturl https://fgcz-c-072.uzh.ch:5000/. Warning in .read(login = login, webservicepassword = webservicepassword, : query failed. bfabricConnectionWorking FALSE saving 'login and webservicepassword' ... plotChargeState output$employee <- renderUI({ read bfabricposturl https://fgcz-c-072.uzh.ch:5000/. Warning in .read(login = login, webservicepassword = webservicepassword, : query failed. bfabricConnectionWorking FALSE saving 'login and webservicepassword' ... output$employee <- renderUI({ bfabricConnectionWorking TRUE 'empdegree' found. Warning in shinyStore::updateStore(session, "login", isolate(input$login), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "webservicepassword", isolate(input$webservicepassword), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "project", isolate(input$project), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "login", isolate(input$login), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "webservicepassword", isolate(input$webservicepassword), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "project", isolate(input$project), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "login", isolate(input$login), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "webservicepassword", isolate(input$webservicepassword), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "project", isolate(input$project), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "login", isolate(input$login), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "webservicepassword", isolate(input$webservicepassword), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "project", isolate(input$project), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. resourcesSelected: /srv/www/htdocs//p34292/Proteomics/EXPLORIS_2/analytic_20240220/20240220_C34292_009_S640488_Replicate_3_CIP2A_IP_RPE1_PBM_KO_DsRedTOPBP1CT_Mitosis_IP_experiment.raw, /srv/www/htdocs//p34292/Proteomics/EXPLORIS_2/analytic_20240220/20240220_C34292_003_S640484_Replicate_2_IgG2b_IP_RPE1_PBM_KO_DsRedTOPBP1CT_Mitosis_Control.raw, /srv/www/htdocs//p34292/Proteomics/EXPLORIS_2/analytic_20240220/20240220_C34292_004_S640487_Replicate_2_CIP2A_IP_RPE1_PBM_KO_DsRedTOPBP1CT_Mitosis_IP_experiment.raw, /srv/www/htdocs//p34292/Proteomics/EXPLORIS_2/analytic_20240220/20240220_C34292_007_S640483_Replicate_1_IgG2b_IP_RPE1_PBM_KO_DsRedTOPBP1CT_Mitosis_Control.raw, /srv/www/htdocs//p34292/Proteomics/EXPLORIS_2/analytic_20240220/20240220_C34292_008_S640485_Replicate_3_IgG2b_IP_RPE1_PBM_KO_DsRedTOPBP1CT_Mitosis_Control.raw, /srv/www/htdocs//p34292/Proteomics/EXPLORIS_2/analytic_20240220/20240220_C34292_002_S640486_Replicate_1_CIP2A_IP_RPE1_PBM_KO_DsRedTOPBP1CT_Mitosis_IP_experiment.raw vals$rawfile: /srv/www/htdocs//p34292/Proteomics/EXPLORIS_2/analytic_20240220/20240220_C34292_009_S640488_Replicate_3_CIP2A_IP_RPE1_PBM_KO_DsRedTOPBP1CT_Mitosis_IP_experiment.raw, /srv/www/htdocs//p34292/Proteomics/EXPLORIS_2/analytic_20240220/20240220_C34292_003_S640484_Replicate_2_IgG2b_IP_RPE1_PBM_KO_DsRedTOPBP1CT_Mitosis_Control.raw, /srv/www/htdocs//p34292/Proteomics/EXPLORIS_2/analytic_20240220/20240220_C34292_004_S640487_Replicate_2_CIP2A_IP_RPE1_PBM_KO_DsRedTOPBP1CT_Mitosis_IP_experiment.raw, /srv/www/htdocs//p34292/Proteomics/EXPLORIS_2/analytic_20240220/20240220_C34292_007_S640483_Replicate_1_IgG2b_IP_RPE1_PBM_KO_DsRedTOPBP1CT_Mitosis_Control.raw, /srv/www/htdocs//p34292/Proteomics/EXPLORIS_2/analytic_20240220/20240220_C34292_008_S640485_Replicate_3_IgG2b_IP_RPE1_PBM_KO_DsRedTOPBP1CT_Mitosis_Control.raw, /srv/www/htdocs//p34292/Proteomics/EXPLORIS_2/analytic_20240220/20240220_C34292_002_S640486_Replicate_1_CIP2A_IP_RPE1_PBM_KO_DsRedTOPBP1CT_Mitosis_IP_experiment.raw reading index for 20240220_C34292_009_S640488_Replicate_3_CIP2A_IP_RPE1_PBM_KO_DsRedTOPBP1CT_Mitosis_IP_experiment.raw... reading index for 20240220_C34292_003_S640484_Replicate_2_IgG2b_IP_RPE1_PBM_KO_DsRedTOPBP1CT_Mitosis_Control.raw... reading index for 20240220_C34292_004_S640487_Replicate_2_CIP2A_IP_RPE1_PBM_KO_DsRedTOPBP1CT_Mitosis_IP_experiment.raw... reading index for 20240220_C34292_007_S640483_Replicate_1_IgG2b_IP_RPE1_PBM_KO_DsRedTOPBP1CT_Mitosis_Control.raw... reading index for 20240220_C34292_008_S640485_Replicate_3_IgG2b_IP_RPE1_PBM_KO_DsRedTOPBP1CT_Mitosis_Control.raw... reading index for 20240220_C34292_002_S640486_Replicate_1_CIP2A_IP_RPE1_PBM_KO_DsRedTOPBP1CT_Mitosis_IP_experiment.raw... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading BasePeakIntensity ... reading TIC ... reading TIC ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... plotTicBasepeak ggplot2::ggsave to file /tmp/Rtmp0cJRcA/rawDiag_20240226-150806_plotTicBasepeak.pdf Warning in shinyStore::updateStore(session, "login", isolate(input$login), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "webservicepassword", isolate(input$webservicepassword), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "project", isolate(input$project), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. The current plot is available as workunit 300362. Rendering actionButton to link workunit 300362 in B-Fabric. Warning in shinyStore::updateStore(session, "login", isolate(input$login), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "webservicepassword", isolate(input$webservicepassword), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "project", isolate(input$project), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. plotLockMassCorrection ggplot2::ggsave to file /tmp/Rtmp0cJRcA/rawDiag_20240226-150823_plotLockMassCorrection.pdf The current plot is available as workunit 300363. Rendering actionButton to link workunit 300363 in B-Fabric. plotMzDistribution ggplot2::ggsave to file /tmp/Rtmp0cJRcA/rawDiag_20240226-150900_plotMzDistribution.pdf The current plot is available as workunit 300364. Rendering actionButton to link workunit 300364 in B-Fabric. plotPrecursorHeatmap ggplot2::ggsave to file /tmp/Rtmp0cJRcA/rawDiag_20240226-150954_plotPrecursorHeatmap.pdf The current plot is available as workunit 300365. Rendering actionButton to link workunit 300365 in B-Fabric. Rendering actionButton to link workunit 300365 in B-Fabric. plotTicBasepeak ggplot2::ggsave to file /tmp/Rtmp0cJRcA/rawDiag_20240226-151039_plotTicBasepeak.pdf The current plot is available as workunit 300366. Rendering actionButton to link workunit 300366 in B-Fabric.