Listening on http://127.0.0.1:37803
Loading required package: rawDiag
Loading required package: bfabricShiny

Attaching package: 'bfabricShiny'

The following object is masked from 'package:base':

    save

plotTicBasepeak
output$employee <- renderUI({
read bfabricposturl https://fgcz-c-072.uzh.ch:5000/.
Warning in .read(login = login, webservicepassword = webservicepassword,  :
  query failed.
bfabricConnectionWorking FALSE
saving 'login and webservicepassword' ...
output$employee <- renderUI({
bfabricConnectionWorking TRUE
'empdegree' found.
saving 'login and webservicepassword' ...
saving 'login and webservicepassword' ...
saving 'login and webservicepassword' ...
resourcesSelected: /srv/www/htdocs//p34236/Proteomics/EXPLORIS_2/analytic_20240223/20240223_C34236_002_S639111_2_PLGA_Proteincorona_Group_2.raw, /srv/www/htdocs//p34236/Proteomics/EXPLORIS_2/analytic_20240223/20240223_C34236_005_S639113_4_HS_control_Control.raw, /srv/www/htdocs//p34236/Proteomics/EXPLORIS_2/analytic_20240223/20240223_C34236_004_S639112_3_LPNPs_Proteincorona_Group_3.raw, /srv/www/htdocs//p34236/Proteomics/EXPLORIS_2/analytic_20240223/20240223_C34236_003_S639110_1_Liposomes__Proteincorona_Group_1.raw
vals$rawfile: /srv/www/htdocs//p34236/Proteomics/EXPLORIS_2/analytic_20240223/20240223_C34236_002_S639111_2_PLGA_Proteincorona_Group_2.raw,
	/srv/www/htdocs//p34236/Proteomics/EXPLORIS_2/analytic_20240223/20240223_C34236_005_S639113_4_HS_control_Control.raw,
	/srv/www/htdocs//p34236/Proteomics/EXPLORIS_2/analytic_20240223/20240223_C34236_004_S639112_3_LPNPs_Proteincorona_Group_3.raw,
	/srv/www/htdocs//p34236/Proteomics/EXPLORIS_2/analytic_20240223/20240223_C34236_003_S639110_1_Liposomes__Proteincorona_Group_1.raw
reading index for 20240223_C34236_002_S639111_2_PLGA_Proteincorona_Group_2.raw...
reading index for 20240223_C34236_005_S639113_4_HS_control_Control.raw...
reading index for 20240223_C34236_004_S639112_3_LPNPs_Proteincorona_Group_3.raw...
reading index for 20240223_C34236_003_S639110_1_Liposomes__Proteincorona_Group_1.raw...
determining ElapsedScanTimesec ...
reading trailer LM m/z-Correction (ppm) ...
determining ElapsedScanTimesec ...
reading trailer LM m/z-Correction (ppm) ...
determining ElapsedScanTimesec ...
reading trailer LM m/z-Correction (ppm) ...
determining ElapsedScanTimesec ...
reading trailer LM m/z-Correction (ppm) ...
reading trailer AGC ...
reading trailer AGC ...
reading trailer AGC ...
reading trailer AGC ...
reading trailer AGC PS Mode ...
reading trailer AGC PS Mode ...
reading trailer AGC PS Mode ...
reading trailer AGC PS Mode ...
reading trailer FT Resolution ...
reading trailer FT Resolution ...
reading trailer FT Resolution ...
reading trailer FT Resolution ...
reading trailer Ion Injection Time (ms) ...
reading trailer Ion Injection Time (ms) ...
reading trailer Ion Injection Time (ms) ...
reading trailer Ion Injection Time (ms) ...
reading TIC ...
reading TIC ...
reading TIC ...
reading TIC ...
reading BasePeakIntensity ...
reading BasePeakIntensity ...
reading BasePeakIntensity ...
reading BasePeakIntensity ...
ggplot2::ggsave to file /tmp/Rtmp7k45cV/rawDiag_20240227-170050_plotTicBasepeak.pdf
saving 'login and webservicepassword' ...
The current plot is available as workunit 300427.
Rendering actionButton to link workunit 300427 in B-Fabric.
saving 'login and webservicepassword' ...
plotLockMassCorrection
Rendering actionButton to link workunit 300427 in B-Fabric.
ggplot2::ggsave to file /tmp/Rtmp7k45cV/rawDiag_20240227-170117_plotLockMassCorrection.pdf
The current plot is available as workunit 300428.
Rendering actionButton to link workunit 300428 in B-Fabric.
plotInjectionTime
Rendering actionButton to link workunit 300428 in B-Fabric.
ggplot2::ggsave to file /tmp/Rtmp7k45cV/rawDiag_20240227-170214_plotInjectionTime.pdf
The current plot is available as workunit 300430.
Rendering actionButton to link workunit 300430 in B-Fabric.
plotTicBasepeak
ggplot2::ggsave to file /tmp/Rtmp7k45cV/rawDiag_20240227-170311_plotTicBasepeak.pdf
The current plot is available as workunit 300431.
Rendering actionButton to link workunit 300431 in B-Fabric.
Rendering actionButton to link workunit 300431 in B-Fabric.


Execution halted