Listening on http://127.0.0.1:37557 Loading required package: rawDiag Loading required package: bfabricShiny Attaching package: 'bfabricShiny' The following object is masked from 'package:base': save plotTicBasepeak output$employee <- renderUI({ read bfabricposturl https://fgcz-c-072.uzh.ch:5000/. Warning in .read(login = login, webservicepassword = webservicepassword, : query failed. bfabricConnectionWorking FALSE saving 'login and webservicepassword' ... output$employee <- renderUI({ bfabricConnectionWorking TRUE 'empdegree' found. saving 'login and webservicepassword' ... saving 'login and webservicepassword' ... saving 'login and webservicepassword' ... resourcesSelected: /srv/www/htdocs//p34208/Proteomics/EXPLORIS_2/analytic_20240223/20240223_C34208_005_S636665_FUSRBDM_2_FUS_RBDM.raw, /srv/www/htdocs//p34208/Proteomics/EXPLORIS_2/analytic_20240223/20240223_C34208_003_S636667_FUSRBDMNLS_1_FUS_RBDM_NLS.raw, /srv/www/htdocs//p34208/Proteomics/EXPLORIS_2/analytic_20240223/20240223_C34208_020_S636662_FUSNLS_2_FUS_NLS.raw, /srv/www/htdocs//p34208/Proteomics/EXPLORIS_2/analytic_20240223/20240223_C34208_022_S636663_FUSNLS_3_FUS_NLS.raw, /srv/www/htdocs//p34208/Proteomics/EXPLORIS_2/analytic_20240223/20240223_C34208_002_S636658_FUSWT_1_FUS_WT.raw, /srv/www/htdocs//p34208/Proteomics/EXPLORIS_2/analytic_20240223/20240223_C34208_014_S636672_BIOID2ONLY_3_BioID2_only.raw, /srv/www/htdocs//p34208/Proteomics/EXPLORIS_2/analytic_20240223/20240223_C34208_021_S636659_FUSWT_2_FUS_WT.raw, /srv/www/htdocs//p34208/Proteomics/EXPLORIS_2/analytic_20240223/20240223_C34208_009_S636664_FUSRBDM_1_FUS_RBDM.raw, /srv/www/htdocs//p34208/Proteomics/EXPLORIS_2/analytic_20240223/20240223_C34208_011_S636661_FUSNLS_1_FUS_NLS_rep.raw, /srv/www/htdocs//p34208/Proteomics/EXPLORIS_2/analytic_20240223/20240223_C34208_004_S636668_FUSRBDMNLS_2_FUS_RBDM_NLS.raw, /srv/www/htdocs//p34208/Proteomics/EXPLORIS_2/analytic_20240223/20240223_C34208_016_S636660_FUSWT_3_FUS_WT.raw, /srv/www/htdocs//p34208/Proteomics/EXPLORIS_2/analytic_20240223/20240223_C34208_010_S636669_FUSRBDMNLS_3_FUS_RBDM_NLS.raw, /srv/www/htdocs//p34208/Proteomics/EXPLORIS_2/analytic_20240223/20240223_C34208_008_S636670_BIOID2ONLY_1_BioID2_only.raw, /srv/www/htdocs//p34208/Proteomics/EXPLORIS_2/analytic_20240223/20240223_C34208_015_S636671_BIOID2ONLY_2_BioID2_only.raw, /srv/www/htdocs//p34208/Proteomics/EXPLORIS_2/analytic_20240223/20240223_C34208_017_S636666_FUSRBDM_3_FUS_RBDM.raw vals$rawfile: /srv/www/htdocs//p34208/Proteomics/EXPLORIS_2/analytic_20240223/20240223_C34208_005_S636665_FUSRBDM_2_FUS_RBDM.raw, /srv/www/htdocs//p34208/Proteomics/EXPLORIS_2/analytic_20240223/20240223_C34208_003_S636667_FUSRBDMNLS_1_FUS_RBDM_NLS.raw, /srv/www/htdocs//p34208/Proteomics/EXPLORIS_2/analytic_20240223/20240223_C34208_020_S636662_FUSNLS_2_FUS_NLS.raw, /srv/www/htdocs//p34208/Proteomics/EXPLORIS_2/analytic_20240223/20240223_C34208_022_S636663_FUSNLS_3_FUS_NLS.raw, /srv/www/htdocs//p34208/Proteomics/EXPLORIS_2/analytic_20240223/20240223_C34208_002_S636658_FUSWT_1_FUS_WT.raw, /srv/www/htdocs//p34208/Proteomics/EXPLORIS_2/analytic_20240223/20240223_C34208_014_S636672_BIOID2ONLY_3_BioID2_only.raw, /srv/www/htdocs//p34208/Proteomics/EXPLORIS_2/analytic_20240223/20240223_C34208_021_S636659_FUSWT_2_FUS_WT.raw, /srv/www/htdocs//p34208/Proteomics/EXPLORIS_2/analytic_20240223/20240223_C34208_009_S636664_FUSRBDM_1_FUS_RBDM.raw, /srv/www/htdocs//p34208/Proteomics/EXPLORIS_2/analytic_20240223/20240223_C34208_011_S636661_FUSNLS_1_FUS_NLS_rep.raw, /srv/www/htdocs//p34208/Proteomics/EXPLORIS_2/analytic_20240223/20240223_C34208_004_S636668_FUSRBDMNLS_2_FUS_RBDM_NLS.raw, /srv/www/htdocs//p34208/Proteomics/EXPLORIS_2/analytic_20240223/20240223_C34208_016_S636660_FUSWT_3_FUS_WT.raw, /srv/www/htdocs//p34208/Proteomics/EXPLORIS_2/analytic_20240223/20240223_C34208_010_S636669_FUSRBDMNLS_3_FUS_RBDM_NLS.raw, /srv/www/htdocs//p34208/Proteomics/EXPLORIS_2/analytic_20240223/20240223_C34208_008_S636670_BIOID2ONLY_1_BioID2_only.raw, /srv/www/htdocs//p34208/Proteomics/EXPLORIS_2/analytic_20240223/20240223_C34208_015_S636671_BIOID2ONLY_2_BioID2_only.raw, /srv/www/htdocs//p34208/Proteomics/EXPLORIS_2/analytic_20240223/20240223_C34208_017_S636666_FUSRBDM_3_FUS_RBDM.raw reading index for 20240223_C34208_005_S636665_FUSRBDM_2_FUS_RBDM.raw... reading index for 20240223_C34208_003_S636667_FUSRBDMNLS_1_FUS_RBDM_NLS.raw... reading index for 20240223_C34208_020_S636662_FUSNLS_2_FUS_NLS.raw... reading index for 20240223_C34208_022_S636663_FUSNLS_3_FUS_NLS.raw... reading index for 20240223_C34208_002_S636658_FUSWT_1_FUS_WT.raw... reading index for 20240223_C34208_014_S636672_BIOID2ONLY_3_BioID2_only.raw... reading index for 20240223_C34208_021_S636659_FUSWT_2_FUS_WT.raw... reading index for 20240223_C34208_009_S636664_FUSRBDM_1_FUS_RBDM.raw... reading index for 20240223_C34208_011_S636661_FUSNLS_1_FUS_NLS_rep.raw... reading index for 20240223_C34208_004_S636668_FUSRBDMNLS_2_FUS_RBDM_NLS.raw... reading index for 20240223_C34208_016_S636660_FUSWT_3_FUS_WT.raw... reading index for 20240223_C34208_010_S636669_FUSRBDMNLS_3_FUS_RBDM_NLS.raw... reading index for 20240223_C34208_008_S636670_BIOID2ONLY_1_BioID2_only.raw... reading index for 20240223_C34208_015_S636671_BIOID2ONLY_2_BioID2_only.raw... reading index for 20240223_C34208_017_S636666_FUSRBDM_3_FUS_RBDM.raw... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... ggplot2::ggsave to file /tmp/RtmpWyZvIP/rawDiag_20240228-162647_plotTicBasepeak.pdf saving 'login and webservicepassword' ... The current plot is available as workunit 300464. Rendering actionButton to link workunit 300464 in B-Fabric. saving 'login and webservicepassword' ... Rendering actionButton to link workunit 300464 in B-Fabric. ggplot2::ggsave to file /tmp/RtmpWyZvIP/rawDiag_20240228-162812_plotTicBasepeak.pdf ggplot2::ggsave to file /tmp/RtmpWyZvIP/rawDiag_20240228-162826_plotTicBasepeak.pdf ggplot2::ggsave to file /tmp/RtmpWyZvIP/rawDiag_20240228-162908_plotTicBasepeak.pdf plotLockMassCorrection Rendering actionButton to link workunit 300464 in B-Fabric. ggplot2::ggsave to file /tmp/RtmpWyZvIP/rawDiag_20240228-162929_plotLockMassCorrection.pdf The current plot is available as workunit 300465. Rendering actionButton to link workunit 300465 in B-Fabric. plotInjectionTime Rendering actionButton to link workunit 300465 in B-Fabric. ggplot2::ggsave to file /tmp/RtmpWyZvIP/rawDiag_20240228-163108_plotInjectionTime.pdf The current plot is available as workunit 300466. Rendering actionButton to link workunit 300466 in B-Fabric. plotTicBasepeak ggplot2::ggsave to file /tmp/RtmpWyZvIP/rawDiag_20240228-163202_plotTicBasepeak.pdf The current plot is available as workunit 300467. Rendering actionButton to link workunit 300467 in B-Fabric. plotChargeState output$employee <- renderUI({ read bfabricposturl https://fgcz-c-072.uzh.ch:5000/. Warning in .read(login = login, webservicepassword = webservicepassword, : query failed. bfabricConnectionWorking FALSE saving 'login and webservicepassword' ... Execution halted