Listening on http://127.0.0.1:33771 Loading required package: rawDiag Loading required package: bfabricShiny Attaching package: 'bfabricShiny' The following object is masked from 'package:base': save plotChargeState output$employee <- renderUI({ read bfabricposturl https://fgcz-c-072.uzh.ch:5000/. Warning in .read(login = login, webservicepassword = webservicepassword, : query failed. bfabricConnectionWorking FALSE saving 'login and webservicepassword' ... output$employee <- renderUI({ Warning in .read(login = login, webservicepassword = webservicepassword, : query failed. bfabricConnectionWorking FALSE output$employee <- renderUI({ bfabricConnectionWorking TRUE 'empdegree' found. Warning in shinyStore::updateStore(session, "login", isolate(input$login), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "webservicepassword", isolate(input$webservicepassword), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "project", isolate(input$project), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "login", isolate(input$login), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "webservicepassword", isolate(input$webservicepassword), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "project", isolate(input$project), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "login", isolate(input$login), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "webservicepassword", isolate(input$webservicepassword), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "project", isolate(input$project), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "login", isolate(input$login), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "webservicepassword", isolate(input$webservicepassword), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "project", isolate(input$project), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. plotTicBasepeak resourcesSelected: /srv/www/htdocs//p34551/Proteomics/EXPLORIS_2/analytic_20240313/20240313_C34551_017_S650193_240308_MAC-CIAO3_3_Group_3.raw, /srv/www/htdocs//p34551/Proteomics/EXPLORIS_2/analytic_20240313/20240313_C34551_019_S650198_240308_MAC-GFP_2_Control.raw, /srv/www/htdocs//p34551/Proteomics/EXPLORIS_2/analytic_20240313/20240313_C34551_003_S650199_240308_MAC-GFP_3_Control.raw, /srv/www/htdocs//p34551/Proteomics/EXPLORIS_2/analytic_20240313/20240313_C34551_024_S650195_240308_MAC-MMS19_2_Group_4.raw, /srv/www/htdocs//p34551/Proteomics/EXPLORIS_2/analytic_20240313/20240313_C34551_014_S650186_240308_MAC-CIAO1_2_Group_1.raw, /srv/www/htdocs//p34551/Proteomics/EXPLORIS_2/analytic_20240313/20240313_C34551_007_S650197_240308_MAC-GFP_1_Control.raw, /srv/www/htdocs//p34551/Proteomics/EXPLORIS_2/analytic_20240313/20240313_C34551_009_S650188_240308_MAC-CIAO2B_1_Group_2.raw, /srv/www/htdocs//p34551/Proteomics/EXPLORIS_2/analytic_20240313/20240313_C34551_018_S650196_240308_MAC-MMS19_3_Group_4.raw, /srv/www/htdocs//p34551/Proteomics/EXPLORIS_2/analytic_20240313/20240313_C34551_023_S650190_240308_MAC-CIAO2B_3_Group_2.raw, /srv/www/htdocs//p34551/Proteomics/EXPLORIS_2/analytic_20240313/20240313_C34551_004_S650192_240308_MAC-CIAO3_2_Group_3.raw, /srv/www/htdocs//p34551/Proteomics/EXPLORIS_2/analytic_20240313/20240313_C34551_022_S650187_240308_MAC-CIAO1_3_Group_1.raw, /srv/www/htdocs//p34551/Proteomics/EXPLORIS_2/analytic_20240313/20240313_C34551_002_S650189_240308_MAC-CIAO2B_2_Group_2.raw, /srv/www/htdocs//p34551/Proteomics/EXPLORIS_2/analytic_20240313/20240313_C34551_013_S650185_240308_MAC-CIAO1_1_Group_1.raw, /srv/www/htdocs//p34551/Proteomics/EXPLORIS_2/analytic_20240313/20240313_C34551_008_S650191_240308_MAC-CIAO3_1_Group_3.raw, /srv/www/htdocs//p34551/Proteomics/EXPLORIS_2/analytic_20240313/20240313_C34551_012_S650194_240308_MAC-MMS19_1_Group_4.raw vals$rawfile: /srv/www/htdocs//p34551/Proteomics/EXPLORIS_2/analytic_20240313/20240313_C34551_017_S650193_240308_MAC-CIAO3_3_Group_3.raw, /srv/www/htdocs//p34551/Proteomics/EXPLORIS_2/analytic_20240313/20240313_C34551_019_S650198_240308_MAC-GFP_2_Control.raw, /srv/www/htdocs//p34551/Proteomics/EXPLORIS_2/analytic_20240313/20240313_C34551_003_S650199_240308_MAC-GFP_3_Control.raw, /srv/www/htdocs//p34551/Proteomics/EXPLORIS_2/analytic_20240313/20240313_C34551_024_S650195_240308_MAC-MMS19_2_Group_4.raw, /srv/www/htdocs//p34551/Proteomics/EXPLORIS_2/analytic_20240313/20240313_C34551_014_S650186_240308_MAC-CIAO1_2_Group_1.raw, /srv/www/htdocs//p34551/Proteomics/EXPLORIS_2/analytic_20240313/20240313_C34551_007_S650197_240308_MAC-GFP_1_Control.raw, /srv/www/htdocs//p34551/Proteomics/EXPLORIS_2/analytic_20240313/20240313_C34551_009_S650188_240308_MAC-CIAO2B_1_Group_2.raw, /srv/www/htdocs//p34551/Proteomics/EXPLORIS_2/analytic_20240313/20240313_C34551_018_S650196_240308_MAC-MMS19_3_Group_4.raw, /srv/www/htdocs//p34551/Proteomics/EXPLORIS_2/analytic_20240313/20240313_C34551_023_S650190_240308_MAC-CIAO2B_3_Group_2.raw, /srv/www/htdocs//p34551/Proteomics/EXPLORIS_2/analytic_20240313/20240313_C34551_004_S650192_240308_MAC-CIAO3_2_Group_3.raw, /srv/www/htdocs//p34551/Proteomics/EXPLORIS_2/analytic_20240313/20240313_C34551_022_S650187_240308_MAC-CIAO1_3_Group_1.raw, /srv/www/htdocs//p34551/Proteomics/EXPLORIS_2/analytic_20240313/20240313_C34551_002_S650189_240308_MAC-CIAO2B_2_Group_2.raw, /srv/www/htdocs//p34551/Proteomics/EXPLORIS_2/analytic_20240313/20240313_C34551_013_S650185_240308_MAC-CIAO1_1_Group_1.raw, /srv/www/htdocs//p34551/Proteomics/EXPLORIS_2/analytic_20240313/20240313_C34551_008_S650191_240308_MAC-CIAO3_1_Group_3.raw, /srv/www/htdocs//p34551/Proteomics/EXPLORIS_2/analytic_20240313/20240313_C34551_012_S650194_240308_MAC-MMS19_1_Group_4.raw reading index for 20240313_C34551_017_S650193_240308_MAC-CIAO3_3_Group_3.raw... reading index for 20240313_C34551_019_S650198_240308_MAC-GFP_2_Control.raw... reading index for 20240313_C34551_003_S650199_240308_MAC-GFP_3_Control.raw... reading index for 20240313_C34551_024_S650195_240308_MAC-MMS19_2_Group_4.raw... reading index for 20240313_C34551_014_S650186_240308_MAC-CIAO1_2_Group_1.raw... reading index for 20240313_C34551_007_S650197_240308_MAC-GFP_1_Control.raw... reading index for 20240313_C34551_009_S650188_240308_MAC-CIAO2B_1_Group_2.raw... reading index for 20240313_C34551_018_S650196_240308_MAC-MMS19_3_Group_4.raw... reading index for 20240313_C34551_023_S650190_240308_MAC-CIAO2B_3_Group_2.raw... reading index for 20240313_C34551_004_S650192_240308_MAC-CIAO3_2_Group_3.raw... reading index for 20240313_C34551_022_S650187_240308_MAC-CIAO1_3_Group_1.raw... reading index for 20240313_C34551_002_S650189_240308_MAC-CIAO2B_2_Group_2.raw... reading index for 20240313_C34551_013_S650185_240308_MAC-CIAO1_1_Group_1.raw... reading index for 20240313_C34551_008_S650191_240308_MAC-CIAO3_1_Group_3.raw... reading index for 20240313_C34551_012_S650194_240308_MAC-MMS19_1_Group_4.raw... determining ElapsedScanTimesec ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... ggplot2::ggsave to file /tmp/Rtmp6inRe2/rawDiag_20240318-143253_plotTicBasepeak.pdf Warning in shinyStore::updateStore(session, "login", isolate(input$login), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "webservicepassword", isolate(input$webservicepassword), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "project", isolate(input$project), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. The current plot is available as workunit 301231. Rendering actionButton to link workunit 301231 in B-Fabric. Warning in shinyStore::updateStore(session, "login", isolate(input$login), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "webservicepassword", isolate(input$webservicepassword), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "project", isolate(input$project), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. plotLockMassCorrection ggplot2::ggsave to file /tmp/Rtmp6inRe2/rawDiag_20240318-143335_plotLockMassCorrection.pdf The current plot is available as workunit 301232. Rendering actionButton to link workunit 301232 in B-Fabric. plotInjectionTime ggplot2::ggsave to file /tmp/Rtmp6inRe2/rawDiag_20240318-143529_plotInjectionTime.pdf The current plot is available as workunit 301233. Rendering actionButton to link workunit 301233 in B-Fabric. Rendering actionButton to link workunit 301233 in B-Fabric. plotTicBasepeak plotChargeState output$employee <- renderUI({ read bfabricposturl https://fgcz-c-072.uzh.ch:5000/. Warning in .read(login = login, webservicepassword = webservicepassword, : query failed. bfabricConnectionWorking FALSE saving 'login and webservicepassword' ... output$employee <- renderUI({ Warning in .read(login = login, webservicepassword = webservicepassword, : query failed. bfabricConnectionWorking FALSE output$employee <- renderUI({ bfabricConnectionWorking TRUE 'empdegree' found. Warning in shinyStore::updateStore(session, "login", isolate(input$login), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "webservicepassword", isolate(input$webservicepassword), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "project", isolate(input$project), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "login", isolate(input$login), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "webservicepassword", isolate(input$webservicepassword), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "project", isolate(input$project), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. plotChargeState output$employee <- renderUI({ read bfabricposturl https://fgcz-c-072.uzh.ch:5000/. Warning in .read(login = login, webservicepassword = webservicepassword, : query failed. bfabricConnectionWorking FALSE saving 'login and webservicepassword' ... output$employee <- renderUI({ bfabricConnectionWorking TRUE 'empdegree' found. saving 'login and webservicepassword' ... plotChargeState output$employee <- renderUI({ read bfabricposturl https://fgcz-c-072.uzh.ch:5000/. Warning in .read(login = login, webservicepassword = webservicepassword, : query failed. bfabricConnectionWorking FALSE saving 'login and webservicepassword' ... output$employee <- renderUI({ bfabricConnectionWorking TRUE 'empdegree' found. Warning in shinyStore::updateStore(session, "login", isolate(input$login), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "webservicepassword", isolate(input$webservicepassword), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "project", isolate(input$project), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "login", isolate(input$login), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "webservicepassword", isolate(input$webservicepassword), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "project", isolate(input$project), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Execution halted