Listening on http://127.0.0.1:40001 Loading required package: rawDiag Loading required package: bfabricShiny Attaching package: 'bfabricShiny' The following object is masked from 'package:base': save plotChargeState output$employee <- renderUI({ read bfabricposturl https://fgcz-c-072.uzh.ch:5000/. Warning in .read(login = login, webservicepassword = webservicepassword, : query failed. bfabricConnectionWorking FALSE saving 'login and webservicepassword' ... output$employee <- renderUI({ bfabricConnectionWorking TRUE 'empdegree' found. saving 'login and webservicepassword' ... saving 'login and webservicepassword' ... saving 'login and webservicepassword' ... resourcesSelected: /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E30H50Y20_180K_2Th3p5ms_03.raw vals$rawfile: /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E30H50Y20_180K_2Th3p5ms_03.raw reading index for 20230324_OLEP08_800ng_30min_E30H50Y20_180K_2Th3p5ms_03.raw... ggplot2::ggsave to file /tmp/RtmpqzvJNT/rawDiag_20240319-151339_plotChargeState.pdf saving 'login and webservicepassword' ... The current plot is available as workunit . plotTicBasepeak ggplot2::ggsave to file /tmp/RtmpqzvJNT/rawDiag_20240319-151351_plotTicBasepeak.pdf The current plot is available as workunit . The current plot is available as workunit . plotChargeState output$employee <- renderUI({ read bfabricposturl https://fgcz-c-072.uzh.ch:5000/. Warning in .read(login = login, webservicepassword = webservicepassword, : query failed. bfabricConnectionWorking FALSE saving 'login and webservicepassword' ... output$employee <- renderUI({ bfabricConnectionWorking TRUE 'empdegree' found. saving 'login and webservicepassword' ... saving 'login and webservicepassword' ... plotTicBasepeak saving 'login and webservicepassword' ... resourcesSelected: /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E30H50Y20_180K_2Th3p5ms_03.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E40H50Y10_180K_2Th3p5ms_02.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E5H50Y45_180K_2Th3p5ms_01.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E40H50Y10_180K_2Th3p5ms_01.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E45H50Y5_180K_2Th3p5ms_02.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E10H50Y40_180K_2Th3p5ms_01.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E20H50Y30_180K_2Th3p5ms_03.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E40H50Y10_180K_2Th3p5ms_03.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E5H50Y45_180K_2Th3p5ms_02.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E45H50Y5_180K_2Th3p5ms_03.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E45H50Y5_180K_2Th3p5ms_01.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E20H50Y30_180K_2Th3p5ms_02.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E10H50Y40_180K_2Th3p5ms_02.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E30H50Y20_180K_2Th3p5ms_02.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E30H50Y20_180K_2Th3p5ms_01.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E20H50Y30_180K_2Th3p5ms_01.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E10H50Y40_180K_2Th3p5ms_03.raw vals$rawfile: /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E30H50Y20_180K_2Th3p5ms_03.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E40H50Y10_180K_2Th3p5ms_02.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E5H50Y45_180K_2Th3p5ms_01.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E40H50Y10_180K_2Th3p5ms_01.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E45H50Y5_180K_2Th3p5ms_02.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E10H50Y40_180K_2Th3p5ms_01.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E20H50Y30_180K_2Th3p5ms_03.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E40H50Y10_180K_2Th3p5ms_03.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E5H50Y45_180K_2Th3p5ms_02.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E45H50Y5_180K_2Th3p5ms_03.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E45H50Y5_180K_2Th3p5ms_01.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E20H50Y30_180K_2Th3p5ms_02.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E10H50Y40_180K_2Th3p5ms_02.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E30H50Y20_180K_2Th3p5ms_02.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E30H50Y20_180K_2Th3p5ms_01.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E20H50Y30_180K_2Th3p5ms_01.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E10H50Y40_180K_2Th3p5ms_03.raw reading index for 20230324_OLEP08_800ng_30min_E30H50Y20_180K_2Th3p5ms_03.raw... reading index for 20230324_OLEP08_800ng_30min_E40H50Y10_180K_2Th3p5ms_02.raw... reading index for 20230324_OLEP08_800ng_30min_E5H50Y45_180K_2Th3p5ms_01.raw... reading index for 20230324_OLEP08_800ng_30min_E40H50Y10_180K_2Th3p5ms_01.raw... reading index for 20230324_OLEP08_800ng_30min_E45H50Y5_180K_2Th3p5ms_02.raw... reading index for 20230324_OLEP08_800ng_30min_E10H50Y40_180K_2Th3p5ms_01.raw... reading index for 20230324_OLEP08_800ng_30min_E20H50Y30_180K_2Th3p5ms_03.raw... reading index for 20230324_OLEP08_800ng_30min_E40H50Y10_180K_2Th3p5ms_03.raw... reading index for 20230324_OLEP08_800ng_30min_E5H50Y45_180K_2Th3p5ms_02.raw... reading index for 20230324_OLEP08_800ng_30min_E45H50Y5_180K_2Th3p5ms_03.raw... reading index for 20230324_OLEP08_800ng_30min_E45H50Y5_180K_2Th3p5ms_01.raw... reading index for 20230324_OLEP08_800ng_30min_E20H50Y30_180K_2Th3p5ms_02.raw... reading index for 20230324_OLEP08_800ng_30min_E10H50Y40_180K_2Th3p5ms_02.raw... reading index for 20230324_OLEP08_800ng_30min_E30H50Y20_180K_2Th3p5ms_02.raw... reading index for 20230324_OLEP08_800ng_30min_E30H50Y20_180K_2Th3p5ms_01.raw... reading index for 20230324_OLEP08_800ng_30min_E20H50Y30_180K_2Th3p5ms_01.raw... reading index for 20230324_OLEP08_800ng_30min_E10H50Y40_180K_2Th3p5ms_03.raw... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... determining ElapsedScanTimesec ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... reading trailer LM m/z-Correction (ppm) ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... determining ElapsedScanTimesec ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... reading trailer LM m/z-Correction (ppm) ... reading trailer LM m/z-Correction (ppm) ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... determining ElapsedScanTimesec ... determining ElapsedScanTimesec ... determining ElapsedScanTimesec ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... reading trailer LM m/z-Correction (ppm) ... reading trailer LM m/z-Correction (ppm) ... reading trailer LM m/z-Correction (ppm) ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading BasePeakIntensity ... reading TIC ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading TIC ... reading TIC ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading TIC ... reading TIC ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... ggplot2::ggsave to file /tmp/RtmpqzvJNT/rawDiag_20240320-142808_plotTicBasepeak.pdf saving 'login and webservicepassword' ... Warning in resources$relativepath == input$relativepath : longer object length is not a multiple of shorter object length The current plot is available as workunit . plotChargeState output$employee <- renderUI({ read bfabricposturl https://fgcz-c-072.uzh.ch:5000/. Warning in .read(login = login, webservicepassword = webservicepassword, : query failed. bfabricConnectionWorking FALSE saving 'login and webservicepassword' ... output$employee <- renderUI({ bfabricConnectionWorking TRUE 'empdegree' found. Warning in shinyStore::updateStore(session, "login", isolate(input$login), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "webservicepassword", isolate(input$webservicepassword), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "project", isolate(input$project), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "login", isolate(input$login), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "webservicepassword", isolate(input$webservicepassword), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "project", isolate(input$project), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "login", isolate(input$login), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "webservicepassword", isolate(input$webservicepassword), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "project", isolate(input$project), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "login", isolate(input$login), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "webservicepassword", isolate(input$webservicepassword), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "project", isolate(input$project), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. resourcesSelected: /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E30H50Y20_180K_2Th3p5ms_03.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E40H50Y10_180K_2Th3p5ms_02.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E5H50Y45_180K_2Th3p5ms_01.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E40H50Y10_180K_2Th3p5ms_01.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E45H50Y5_180K_2Th3p5ms_02.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E10H50Y40_180K_2Th3p5ms_01.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E20H50Y30_180K_2Th3p5ms_03.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E40H50Y10_180K_2Th3p5ms_03.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E5H50Y45_180K_2Th3p5ms_02.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E45H50Y5_180K_2Th3p5ms_03.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E5H50Y45_180K_2Th3p5ms_03.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E45H50Y5_180K_2Th3p5ms_01.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E20H50Y30_180K_2Th3p5ms_02.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E10H50Y40_180K_2Th3p5ms_02.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E30H50Y20_180K_2Th3p5ms_02.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E30H50Y20_180K_2Th3p5ms_01.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E20H50Y30_180K_2Th3p5ms_01.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E10H50Y40_180K_2Th3p5ms_03.raw vals$rawfile: /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E30H50Y20_180K_2Th3p5ms_03.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E40H50Y10_180K_2Th3p5ms_02.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E5H50Y45_180K_2Th3p5ms_01.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E40H50Y10_180K_2Th3p5ms_01.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E45H50Y5_180K_2Th3p5ms_02.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E10H50Y40_180K_2Th3p5ms_01.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E20H50Y30_180K_2Th3p5ms_03.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E40H50Y10_180K_2Th3p5ms_03.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E5H50Y45_180K_2Th3p5ms_02.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E45H50Y5_180K_2Th3p5ms_03.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E5H50Y45_180K_2Th3p5ms_03.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E45H50Y5_180K_2Th3p5ms_01.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E20H50Y30_180K_2Th3p5ms_02.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E10H50Y40_180K_2Th3p5ms_02.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E30H50Y20_180K_2Th3p5ms_02.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E30H50Y20_180K_2Th3p5ms_01.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E20H50Y30_180K_2Th3p5ms_01.raw, /srv/www/htdocs//p34645/Proteomics/ASTRAL_1/cpanse_20240315_PXD046444/20230324_OLEP08_800ng_30min_E10H50Y40_180K_2Th3p5ms_03.raw reading index for 20230324_OLEP08_800ng_30min_E30H50Y20_180K_2Th3p5ms_03.raw... reading index for 20230324_OLEP08_800ng_30min_E40H50Y10_180K_2Th3p5ms_02.raw... reading index for 20230324_OLEP08_800ng_30min_E5H50Y45_180K_2Th3p5ms_01.raw... reading index for 20230324_OLEP08_800ng_30min_E40H50Y10_180K_2Th3p5ms_01.raw... reading index for 20230324_OLEP08_800ng_30min_E45H50Y5_180K_2Th3p5ms_02.raw... reading index for 20230324_OLEP08_800ng_30min_E10H50Y40_180K_2Th3p5ms_01.raw... reading index for 20230324_OLEP08_800ng_30min_E20H50Y30_180K_2Th3p5ms_03.raw... reading index for 20230324_OLEP08_800ng_30min_E40H50Y10_180K_2Th3p5ms_03.raw... reading index for 20230324_OLEP08_800ng_30min_E5H50Y45_180K_2Th3p5ms_02.raw... reading index for 20230324_OLEP08_800ng_30min_E45H50Y5_180K_2Th3p5ms_03.raw... reading index for 20230324_OLEP08_800ng_30min_E5H50Y45_180K_2Th3p5ms_03.raw... reading index for 20230324_OLEP08_800ng_30min_E45H50Y5_180K_2Th3p5ms_01.raw... reading index for 20230324_OLEP08_800ng_30min_E20H50Y30_180K_2Th3p5ms_02.raw... reading index for 20230324_OLEP08_800ng_30min_E10H50Y40_180K_2Th3p5ms_02.raw... reading index for 20230324_OLEP08_800ng_30min_E30H50Y20_180K_2Th3p5ms_02.raw... reading index for 20230324_OLEP08_800ng_30min_E30H50Y20_180K_2Th3p5ms_01.raw... reading index for 20230324_OLEP08_800ng_30min_E20H50Y30_180K_2Th3p5ms_01.raw... reading index for 20230324_OLEP08_800ng_30min_E10H50Y40_180K_2Th3p5ms_03.raw... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... determining ElapsedScanTimesec ... reading trailer LM m/z-Correction (ppm) ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer AGC PS Mode ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer FT Resolution ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading trailer Ion Injection Time (ms) ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading TIC ... reading BasePeakIntensity ... reading TIC ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... reading BasePeakIntensity ... plotTicBasepeak ggplot2::ggsave to file /tmp/RtmpqzvJNT/rawDiag_20240320-145848_plotTicBasepeak.pdf Warning in resources$relativepath == input$relativepath : longer object length is not a multiple of shorter object length The current plot is available as workunit . Warning: Error in eval: packageVersion("rawDiag") >= "0.99.30" is not TRUE 43: 42: stop 41: stopifnot 1: runApp Error in eval(exprs, envir) : packageVersion("rawDiag") >= "0.99.30" is not TRUE Warning: Error in eval: packageVersion("rawDiag") >= "0.99.30" is not TRUE 43: 42: stop 41: stopifnot 1: runApp Error in eval(exprs, envir) : packageVersion("rawDiag") >= "0.99.30" is not TRUE