Listening on http://127.0.0.1:37035 Loading required package: rawDiag Loading required package: bfabricShiny Attaching package: 'bfabricShiny' The following object is masked from 'package:base': save plotChargeState output$employee <- renderUI({ read bfabricposturl https://fgcz-c-072.uzh.ch:5000/. Warning in .read(login = login, webservicepassword = webservicepassword, : query failed. bfabricConnectionWorking FALSE saving 'login and webservicepassword' ... output$employee <- renderUI({ bfabricConnectionWorking TRUE 'empdegree' found. Warning in shinyStore::updateStore(session, "login", isolate(input$login), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "webservicepassword", isolate(input$webservicepassword), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "project", isolate(input$project), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "login", isolate(input$login), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "webservicepassword", isolate(input$webservicepassword), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "project", isolate(input$project), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "login", isolate(input$login), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "webservicepassword", isolate(input$webservicepassword), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "project", isolate(input$project), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "login", isolate(input$login), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "webservicepassword", isolate(input$webservicepassword), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "project", isolate(input$project), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. resourcesSelected: /srv/www/htdocs//p34715/Proteomics/EXPLORIS_1/analytic_20240328/20240328_C34715_004_S657758_FLGDEF1_Flagella_deficient_temperature_shock.raw, /srv/www/htdocs//p34715/Proteomics/EXPLORIS_1/analytic_20240328/20240328_C34715_003_S657757_CTRL2_Wild_Type__WT_.raw, /srv/www/htdocs//p34715/Proteomics/EXPLORIS_1/analytic_20240328/20240328_C34715_002_S657759_FLGDEF2_Flagella_deficient_temperature_shock.raw, /srv/www/htdocs//p34715/Proteomics/EXPLORIS_1/analytic_20240328/20240328_C34715_005_S657756_CTRL1_Wild_Type__WT_.raw vals$rawfile: /srv/www/htdocs//p34715/Proteomics/EXPLORIS_1/analytic_20240328/20240328_C34715_004_S657758_FLGDEF1_Flagella_deficient_temperature_shock.raw, /srv/www/htdocs//p34715/Proteomics/EXPLORIS_1/analytic_20240328/20240328_C34715_003_S657757_CTRL2_Wild_Type__WT_.raw, /srv/www/htdocs//p34715/Proteomics/EXPLORIS_1/analytic_20240328/20240328_C34715_002_S657759_FLGDEF2_Flagella_deficient_temperature_shock.raw, /srv/www/htdocs//p34715/Proteomics/EXPLORIS_1/analytic_20240328/20240328_C34715_005_S657756_CTRL1_Wild_Type__WT_.raw reading index for 20240328_C34715_003_S657757_CTRL2_Wild_Type__WT_.raw... reading took80.888seconds reading index for 20240328_C34715_002_S657759_FLGDEF2_Flagella_deficient_temperature_shock.raw... reading took81.505seconds reading index for 20240328_C34715_004_S657758_FLGDEF1_Flagella_deficient_temperature_shock.raw... reading took82.132seconds reading index for 20240328_C34715_005_S657756_CTRL1_Wild_Type__WT_.raw... reading took82.358seconds plotTicBasepeak resourcesSelected: /srv/www/htdocs//p34715/Proteomics/EXPLORIS_1/analytic_20240328/20240328_C34715_004_S657758_FLGDEF1_Flagella_deficient_temperature_shock.raw, /srv/www/htdocs//p34715/Proteomics/EXPLORIS_1/analytic_20240328/20240328_C34715_003_S657757_CTRL2_Wild_Type__WT_.raw, /srv/www/htdocs//p34715/Proteomics/EXPLORIS_1/analytic_20240328/20240328_C34715_002_S657759_FLGDEF2_Flagella_deficient_temperature_shock.raw, /srv/www/htdocs//p34715/Proteomics/EXPLORIS_1/analytic_20240328/20240328_C34715_005_S657756_CTRL1_Wild_Type__WT_.raw vals$rawfile: /srv/www/htdocs//p34715/Proteomics/EXPLORIS_1/analytic_20240328/20240328_C34715_004_S657758_FLGDEF1_Flagella_deficient_temperature_shock.raw, /srv/www/htdocs//p34715/Proteomics/EXPLORIS_1/analytic_20240328/20240328_C34715_003_S657757_CTRL2_Wild_Type__WT_.raw, /srv/www/htdocs//p34715/Proteomics/EXPLORIS_1/analytic_20240328/20240328_C34715_002_S657759_FLGDEF2_Flagella_deficient_temperature_shock.raw, /srv/www/htdocs//p34715/Proteomics/EXPLORIS_1/analytic_20240328/20240328_C34715_005_S657756_CTRL1_Wild_Type__WT_.raw plotChargeState resourcesSelected: /srv/www/htdocs//p34715/Proteomics/EXPLORIS_1/analytic_20240328/20240328_C34715_004_S657758_FLGDEF1_Flagella_deficient_temperature_shock.raw, /srv/www/htdocs//p34715/Proteomics/EXPLORIS_1/analytic_20240328/20240328_C34715_003_S657757_CTRL2_Wild_Type__WT_.raw, /srv/www/htdocs//p34715/Proteomics/EXPLORIS_1/analytic_20240328/20240328_C34715_002_S657759_FLGDEF2_Flagella_deficient_temperature_shock.raw, /srv/www/htdocs//p34715/Proteomics/EXPLORIS_1/analytic_20240328/20240328_C34715_005_S657756_CTRL1_Wild_Type__WT_.raw vals$rawfile: /srv/www/htdocs//p34715/Proteomics/EXPLORIS_1/analytic_20240328/20240328_C34715_004_S657758_FLGDEF1_Flagella_deficient_temperature_shock.raw, /srv/www/htdocs//p34715/Proteomics/EXPLORIS_1/analytic_20240328/20240328_C34715_003_S657757_CTRL2_Wild_Type__WT_.raw, /srv/www/htdocs//p34715/Proteomics/EXPLORIS_1/analytic_20240328/20240328_C34715_002_S657759_FLGDEF2_Flagella_deficient_temperature_shock.raw, /srv/www/htdocs//p34715/Proteomics/EXPLORIS_1/analytic_20240328/20240328_C34715_005_S657756_CTRL1_Wild_Type__WT_.raw plotTicBasepeak Warning in shinyStore::updateStore(session, "login", isolate(input$login), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "webservicepassword", isolate(input$webservicepassword), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "project", isolate(input$project), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. 2472996 list(list(`_classname` = "workunit", `_id` = 301995, application = list(`_classname` = "application", `_id` = 225), container = list(`_classname` = "order", `_id` = 34715), created = "2024-04-03 11:53:22", createdby = "paolo", description = "input files:\np34715/Proteomics/EXPLORIS_1/analytic_20240328/20240328_C34715_005_S657756_CTRL1_Wild_Type__WT_.raw \np34715/Proteomics/EXPLORIS_1/analytic_20240328/20240328_C34715_003_S657757_CTRL2_Wild_Type__WT_.raw \np34715/Proteomics/EXPLORIS_1/analytic_20240328/20240328_C34715_004_S657758_FLGDEF1_Flagella_deficient_temperature_shock.raw\np34715/Proteomics/EXPLORIS_1/analytic_20240328/20240328_C34715_002_S657759_FLGDEF2_Flagella_deficient_temperature_shock.raw\n\nGenerated by Rpkg https://github.com/fgcz/bfabricShiny/ version 0.12.26.2.\nSystem information: Linux, 5.10.0-28-amd64, #1 SMP Debian 5.10.209-2 (2024-01-31), fgcz-c-072, x86_64, unknown, www-data, www-data\n\nTo help us funding further development, please cite:\n(bfabricSiny) PMID: 36073980 DOI: 10.1515/jib-2022-0031", exportable = "false", inputresource = list(list(`_classname` = "resource", `_id` = 2472996)), modified = "2024-04-03 11:53:22", modifiedby = "paolo", name = "plotTicBasepeak", status = "AVAILABLE"))list(list(`_classname` = "resource", `_id` = 2473692, container = list(`_classname` = "order", `_id` = 34715), created = "2024-04-03 11:53:22", createdby = "paolo", filechecksum = "bfa5cb679c35ed64192ccb0534f94dcc", junk = "false", modified = "2024-04-03 11:53:22", modifiedby = "paolo", name = "WU301995-20240403-1153-rawDiag.pdf", relativepath = "container_34715/workunit_301995/WU301995-20240403-1153-rawDiag.pdf", size = "63724", status = "available", storage = list(`_classname` = "storage", `_id` = 10), uri = list("https://fgcz-bfabric.uzh.ch/dmexternal/container_34715/workunit_301995/WU301995-20240403-1153-rawDiag.pdf", "scp://localhost/export/bfabric/data/b-fabric-external-repo/container_34715/workunit_301995/WU301995-20240403-1153-rawDiag.pdf"), workunit = list(`_classname` = "workunit", `_id` = 301995))) The current plot is available as workunit 301995. Rendering actionButton to link workunit 301995 in B-Fabric. Warning in shinyStore::updateStore(session, "login", isolate(input$login), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "webservicepassword", isolate(input$webservicepassword), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "project", isolate(input$project), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Rendering actionButton to link workunit 301995 in B-Fabric. Rendering actionButton to link workunit 301995 in B-Fabric. Execution halted