Listening on http://127.0.0.1:39077
Loading required package: rawDiag
Loading required package: bfabricShiny

Attaching package: 'bfabricShiny'

The following object is masked from 'package:base':

    save

plotChargeState
output$employee <- renderUI({
read bfabricposturl https://fgcz-c-072.uzh.ch:5000/.
Warning in .read(login = login, webservicepassword = webservicepassword,  :
  query failed.
bfabricConnectionWorking FALSE
saving 'login and webservicepassword' ...
output$employee <- renderUI({
bfabricConnectionWorking TRUE
'empdegree' found.
saving 'login and webservicepassword' ...
plotChargeState
output$employee <- renderUI({
read bfabricposturl https://fgcz-c-072.uzh.ch:5000/.
Warning in .read(login = login, webservicepassword = webservicepassword,  :
  query failed.
bfabricConnectionWorking FALSE
saving 'login and webservicepassword' ...
output$employee <- renderUI({
bfabricConnectionWorking TRUE
'empdegree' found.
saving 'login and webservicepassword' ...
saving 'login and webservicepassword' ...
saving 'login and webservicepassword' ...
resourcesSelected: /srv/www/htdocs//p34775/Proteomics/LUMOS_1/roschi_20240411_opt_beads_incubation_time/20240411_012_S660639_FMT-R_009_KF_1xbeads_noSTAGE.raw, /srv/www/htdocs//p34775/Proteomics/LUMOS_1/roschi_20240411_opt_beads_incubation_time/20240411_013_S660639_FMT-R_009_incubON_man_3xbeads_noSTAGE.raw, /srv/www/htdocs//p34775/Proteomics/LUMOS_1/roschi_20240411_opt_beads_incubation_time/20240411_000_clean_blk_20240412072122.raw, /srv/www/htdocs//p34775/Proteomics/LUMOS_1/roschi_20240411_opt_beads_incubation_time/20240411_000_direct_clean_blk_3.raw, /srv/www/htdocs//p34775/Proteomics/LUMOS_1/roschi_20240411_opt_beads_incubation_time/20240411_014_S660639_FMT-R_009_incubON_man_2xbeads_noSTAGE.raw, /srv/www/htdocs//p34775/Proteomics/LUMOS_1/roschi_20240411_opt_beads_incubation_time/20240411_015_S660639_FMT-R_009_incubON_man_1xbeads_noSTAGE.raw, /srv/www/htdocs//p34775/Proteomics/LUMOS_1/roschi_20240411_opt_beads_incubation_time/20240411_004_S660639_FMT-R_009_KF_1xbeads_withSTAGE.raw, /srv/www/htdocs//p34775/Proteomics/LUMOS_1/roschi_20240411_opt_beads_incubation_time/20240411_005_S660639_FMT-R_009_incubON_man_3xbeads_withSTAGE.raw, /srv/www/htdocs//p34775/Proteomics/LUMOS_1/roschi_20240411_opt_beads_incubation_time/20240411_002_S660639_FMT-R_009_KF_3xbeads_withSTAGE.raw, /srv/www/htdocs//p34775/Proteomics/LUMOS_1/roschi_20240411_opt_beads_incubation_time/20240411_011_S660639_FMT-R_009_KF_2xbeads_noSTAGE.raw, /srv/www/htdocs//p34775/Proteomics/LUMOS_1/roschi_20240411_opt_beads_incubation_time/20240411_010_S660639_FMT-R_009_KF_3xbeads_noSTAGE.raw, /srv/www/htdocs//p34775/Proteomics/LUMOS_1/roschi_20240411_opt_beads_incubation_time/20240411_008_S660639_FMT-R_009_incubON_man_1xbeads_withSTAGE.raw, /srv/www/htdocs//p34775/Proteomics/LUMOS_1/roschi_20240411_opt_beads_incubation_time/20240411_003_S660639_FMT-R_009_KF_2xbeads_withSTAGE.raw, /srv/www/htdocs//p34775/Proteomics/LUMOS_1/roschi_20240411_opt_beads_incubation_time/20240411_007_S660639_FMT-R_009_incubON_man_2xbeads_withSTAGE.raw
vals$rawfile: /srv/www/htdocs//p34775/Proteomics/LUMOS_1/roschi_20240411_opt_beads_incubation_time/20240411_012_S660639_FMT-R_009_KF_1xbeads_noSTAGE.raw,
	/srv/www/htdocs//p34775/Proteomics/LUMOS_1/roschi_20240411_opt_beads_incubation_time/20240411_013_S660639_FMT-R_009_incubON_man_3xbeads_noSTAGE.raw,
	/srv/www/htdocs//p34775/Proteomics/LUMOS_1/roschi_20240411_opt_beads_incubation_time/20240411_000_clean_blk_20240412072122.raw,
	/srv/www/htdocs//p34775/Proteomics/LUMOS_1/roschi_20240411_opt_beads_incubation_time/20240411_000_direct_clean_blk_3.raw,
	/srv/www/htdocs//p34775/Proteomics/LUMOS_1/roschi_20240411_opt_beads_incubation_time/20240411_014_S660639_FMT-R_009_incubON_man_2xbeads_noSTAGE.raw,
	/srv/www/htdocs//p34775/Proteomics/LUMOS_1/roschi_20240411_opt_beads_incubation_time/20240411_015_S660639_FMT-R_009_incubON_man_1xbeads_noSTAGE.raw,
	/srv/www/htdocs//p34775/Proteomics/LUMOS_1/roschi_20240411_opt_beads_incubation_time/20240411_004_S660639_FMT-R_009_KF_1xbeads_withSTAGE.raw,
	/srv/www/htdocs//p34775/Proteomics/LUMOS_1/roschi_20240411_opt_beads_incubation_time/20240411_005_S660639_FMT-R_009_incubON_man_3xbeads_withSTAGE.raw,
	/srv/www/htdocs//p34775/Proteomics/LUMOS_1/roschi_20240411_opt_beads_incubation_time/20240411_002_S660639_FMT-R_009_KF_3xbeads_withSTAGE.raw,
	/srv/www/htdocs//p34775/Proteomics/LUMOS_1/roschi_20240411_opt_beads_incubation_time/20240411_011_S660639_FMT-R_009_KF_2xbeads_noSTAGE.raw,
	/srv/www/htdocs//p34775/Proteomics/LUMOS_1/roschi_20240411_opt_beads_incubation_time/20240411_010_S660639_FMT-R_009_KF_3xbeads_noSTAGE.raw,
	/srv/www/htdocs//p34775/Proteomics/LUMOS_1/roschi_20240411_opt_beads_incubation_time/20240411_008_S660639_FMT-R_009_incubON_man_1xbeads_withSTAGE.raw,
	/srv/www/htdocs//p34775/Proteomics/LUMOS_1/roschi_20240411_opt_beads_incubation_time/20240411_003_S660639_FMT-R_009_KF_2xbeads_withSTAGE.raw,
	/srv/www/htdocs//p34775/Proteomics/LUMOS_1/roschi_20240411_opt_beads_incubation_time/20240411_007_S660639_FMT-R_009_incubON_man_2xbeads_withSTAGE.raw
reading index for 20240411_000_clean_blk_20240412072122.raw...
reading took7.203seconds

reading index for 20240411_000_direct_clean_blk_3.raw...
reading took7.256seconds

reading index for 20240411_015_S660639_FMT-R_009_incubON_man_1xbeads_noSTAGE.raw...
reading took19.538seconds

reading index for 20240411_014_S660639_FMT-R_009_incubON_man_2xbeads_noSTAGE.raw...
reading took19.983seconds

reading index for 20240411_008_S660639_FMT-R_009_incubON_man_1xbeads_withSTAGE.raw...
reading took20.16seconds

reading index for 20240411_013_S660639_FMT-R_009_incubON_man_3xbeads_noSTAGE.raw...
reading took20.861seconds

reading index for 20240411_004_S660639_FMT-R_009_KF_1xbeads_withSTAGE.raw...
reading took21.051seconds

reading index for 20240411_007_S660639_FMT-R_009_incubON_man_2xbeads_withSTAGE.raw...
reading took21.127seconds

reading index for 20240411_010_S660639_FMT-R_009_KF_3xbeads_noSTAGE.raw...
reading took21.31seconds

reading index for 20240411_011_S660639_FMT-R_009_KF_2xbeads_noSTAGE.raw...
reading took21.444seconds

reading index for 20240411_005_S660639_FMT-R_009_incubON_man_3xbeads_withSTAGE.raw...
reading took21.582seconds

reading index for 20240411_012_S660639_FMT-R_009_KF_1xbeads_noSTAGE.raw...
reading took21.647seconds

reading index for 20240411_003_S660639_FMT-R_009_KF_2xbeads_withSTAGE.raw...
reading took21.892seconds

reading index for 20240411_002_S660639_FMT-R_009_KF_3xbeads_withSTAGE.raw...
reading took22.03seconds

resourcesSelected: /srv/www/htdocs//p34775/Proteomics/LUMOS_1/roschi_20240411_opt_beads_incubation_time/20240411_012_S660639_FMT-R_009_KF_1xbeads_noSTAGE.raw, /srv/www/htdocs//p34775/Proteomics/LUMOS_1/roschi_20240411_opt_beads_incubation_time/20240411_013_S660639_FMT-R_009_incubON_man_3xbeads_noSTAGE.raw, /srv/www/htdocs//p34775/Proteomics/LUMOS_1/roschi_20240411_opt_beads_incubation_time/20240411_014_S660639_FMT-R_009_incubON_man_2xbeads_noSTAGE.raw, /srv/www/htdocs//p34775/Proteomics/LUMOS_1/roschi_20240411_opt_beads_incubation_time/20240411_015_S660639_FMT-R_009_incubON_man_1xbeads_noSTAGE.raw, /srv/www/htdocs//p34775/Proteomics/LUMOS_1/roschi_20240411_opt_beads_incubation_time/20240411_004_S660639_FMT-R_009_KF_1xbeads_withSTAGE.raw, /srv/www/htdocs//p34775/Proteomics/LUMOS_1/roschi_20240411_opt_beads_incubation_time/20240411_005_S660639_FMT-R_009_incubON_man_3xbeads_withSTAGE.raw, /srv/www/htdocs//p34775/Proteomics/LUMOS_1/roschi_20240411_opt_beads_incubation_time/20240411_002_S660639_FMT-R_009_KF_3xbeads_withSTAGE.raw, /srv/www/htdocs//p34775/Proteomics/LUMOS_1/roschi_20240411_opt_beads_incubation_time/20240411_011_S660639_FMT-R_009_KF_2xbeads_noSTAGE.raw, /srv/www/htdocs//p34775/Proteomics/LUMOS_1/roschi_20240411_opt_beads_incubation_time/20240411_010_S660639_FMT-R_009_KF_3xbeads_noSTAGE.raw, /srv/www/htdocs//p34775/Proteomics/LUMOS_1/roschi_20240411_opt_beads_incubation_time/20240411_008_S660639_FMT-R_009_incubON_man_1xbeads_withSTAGE.raw, /srv/www/htdocs//p34775/Proteomics/LUMOS_1/roschi_20240411_opt_beads_incubation_time/20240411_003_S660639_FMT-R_009_KF_2xbeads_withSTAGE.raw, /srv/www/htdocs//p34775/Proteomics/LUMOS_1/roschi_20240411_opt_beads_incubation_time/20240411_007_S660639_FMT-R_009_incubON_man_2xbeads_withSTAGE.raw
vals$rawfile: /srv/www/htdocs//p34775/Proteomics/LUMOS_1/roschi_20240411_opt_beads_incubation_time/20240411_012_S660639_FMT-R_009_KF_1xbeads_noSTAGE.raw,
	/srv/www/htdocs//p34775/Proteomics/LUMOS_1/roschi_20240411_opt_beads_incubation_time/20240411_013_S660639_FMT-R_009_incubON_man_3xbeads_noSTAGE.raw,
	/srv/www/htdocs//p34775/Proteomics/LUMOS_1/roschi_20240411_opt_beads_incubation_time/20240411_014_S660639_FMT-R_009_incubON_man_2xbeads_noSTAGE.raw,
	/srv/www/htdocs//p34775/Proteomics/LUMOS_1/roschi_20240411_opt_beads_incubation_time/20240411_015_S660639_FMT-R_009_incubON_man_1xbeads_noSTAGE.raw,
	/srv/www/htdocs//p34775/Proteomics/LUMOS_1/roschi_20240411_opt_beads_incubation_time/20240411_004_S660639_FMT-R_009_KF_1xbeads_withSTAGE.raw,
	/srv/www/htdocs//p34775/Proteomics/LUMOS_1/roschi_20240411_opt_beads_incubation_time/20240411_005_S660639_FMT-R_009_incubON_man_3xbeads_withSTAGE.raw,
	/srv/www/htdocs//p34775/Proteomics/LUMOS_1/roschi_20240411_opt_beads_incubation_time/20240411_002_S660639_FMT-R_009_KF_3xbeads_withSTAGE.raw,
	/srv/www/htdocs//p34775/Proteomics/LUMOS_1/roschi_20240411_opt_beads_incubation_time/20240411_011_S660639_FMT-R_009_KF_2xbeads_noSTAGE.raw,
	/srv/www/htdocs//p34775/Proteomics/LUMOS_1/roschi_20240411_opt_beads_incubation_time/20240411_010_S660639_FMT-R_009_KF_3xbeads_noSTAGE.raw,
	/srv/www/htdocs//p34775/Proteomics/LUMOS_1/roschi_20240411_opt_beads_incubation_time/20240411_008_S660639_FMT-R_009_incubON_man_1xbeads_withSTAGE.raw,
	/srv/www/htdocs//p34775/Proteomics/LUMOS_1/roschi_20240411_opt_beads_incubation_time/20240411_003_S660639_FMT-R_009_KF_2xbeads_withSTAGE.raw,
	/srv/www/htdocs//p34775/Proteomics/LUMOS_1/roschi_20240411_opt_beads_incubation_time/20240411_007_S660639_FMT-R_009_incubON_man_2xbeads_withSTAGE.raw
reading index for 20240411_008_S660639_FMT-R_009_incubON_man_1xbeads_withSTAGE.raw...
reading took29.092seconds

reading index for 20240411_014_S660639_FMT-R_009_incubON_man_2xbeads_noSTAGE.raw...
reading took31.361seconds

reading index for 20240411_015_S660639_FMT-R_009_incubON_man_1xbeads_noSTAGE.raw...
reading took32.923seconds

reading index for 20240411_013_S660639_FMT-R_009_incubON_man_3xbeads_noSTAGE.raw...
reading took33.557seconds

reading index for 20240411_011_S660639_FMT-R_009_KF_2xbeads_noSTAGE.raw...
reading took33.821seconds

reading index for 20240411_007_S660639_FMT-R_009_incubON_man_2xbeads_withSTAGE.raw...
reading took33.738seconds

reading index for 20240411_005_S660639_FMT-R_009_incubON_man_3xbeads_withSTAGE.raw...
reading took33.912seconds

reading index for 20240411_010_S660639_FMT-R_009_KF_3xbeads_noSTAGE.raw...
reading took33.994seconds

reading index for 20240411_002_S660639_FMT-R_009_KF_3xbeads_withSTAGE.raw...
reading took34.391seconds

reading index for 20240411_012_S660639_FMT-R_009_KF_1xbeads_noSTAGE.raw...
reading took34.672seconds

reading index for 20240411_003_S660639_FMT-R_009_KF_2xbeads_withSTAGE.raw...
reading took34.818seconds

reading index for 20240411_004_S660639_FMT-R_009_KF_1xbeads_withSTAGE.raw...
reading took35.035seconds

plotPrecursorHeatmap
plotMassDistribution
plotTicBasepeak


Execution halted