Listening on http://127.0.0.1:45903 Loading required package: rawDiag Loading required package: bfabricShiny Attaching package: 'bfabricShiny' The following object is masked from 'package:base': save plotChargeState output$employee <- renderUI({ read bfabricposturl https://fgcz-c-072.uzh.ch:5000/. Warning in .read(login = login, webservicepassword = webservicepassword, : query failed. bfabricConnectionWorking FALSE saving 'login and webservicepassword' ... output$employee <- renderUI({ bfabricConnectionWorking TRUE 'empdegree' found. saving 'login and webservicepassword' ... saving 'login and webservicepassword' ... saving 'login and webservicepassword' ... resourcesSelected: /srv/www/htdocs//p34969/Proteomics/EXPLORIS_1/analytic_20240419/20240419_C34969_003_S679722_oldBeads_1_Old.raw, /srv/www/htdocs//p34969/Proteomics/EXPLORIS_1/analytic_20240419/20240419_C34969_004_S679723_oldBeads_2_Old.raw, /srv/www/htdocs//p34969/Proteomics/EXPLORIS_1/analytic_20240419/20240419_C34969_009_S679727_newBeads_3_New.raw, /srv/www/htdocs//p34969/Proteomics/EXPLORIS_1/analytic_20240419/20240419_C34969_007_S679725_newBeads_1_New.raw, /srv/www/htdocs//p34969/Proteomics/EXPLORIS_1/analytic_20240419/20240419_C34969_005_S679724_oldBeads_3_Old.raw, /srv/www/htdocs//p34969/Proteomics/EXPLORIS_1/analytic_20240419/20240419_C34969_008_S679726_newBeads_2_New.raw vals$rawfile: /srv/www/htdocs//p34969/Proteomics/EXPLORIS_1/analytic_20240419/20240419_C34969_003_S679722_oldBeads_1_Old.raw, /srv/www/htdocs//p34969/Proteomics/EXPLORIS_1/analytic_20240419/20240419_C34969_004_S679723_oldBeads_2_Old.raw, /srv/www/htdocs//p34969/Proteomics/EXPLORIS_1/analytic_20240419/20240419_C34969_009_S679727_newBeads_3_New.raw, /srv/www/htdocs//p34969/Proteomics/EXPLORIS_1/analytic_20240419/20240419_C34969_007_S679725_newBeads_1_New.raw, /srv/www/htdocs//p34969/Proteomics/EXPLORIS_1/analytic_20240419/20240419_C34969_005_S679724_oldBeads_3_Old.raw, /srv/www/htdocs//p34969/Proteomics/EXPLORIS_1/analytic_20240419/20240419_C34969_008_S679726_newBeads_2_New.raw reading index for 20240419_C34969_004_S679723_oldBeads_2_Old.raw... reading took43.065seconds reading index for 20240419_C34969_003_S679722_oldBeads_1_Old.raw... reading took43.339seconds reading index for 20240419_C34969_005_S679724_oldBeads_3_Old.raw... reading took43.329seconds reading index for 20240419_C34969_008_S679726_newBeads_2_New.raw... reading took43.335seconds reading index for 20240419_C34969_009_S679727_newBeads_3_New.raw... reading took43.437seconds reading index for 20240419_C34969_007_S679725_newBeads_1_New.raw... reading took43.589seconds plotTicBasepeak resourcesSelected: /srv/www/htdocs//p34969/Proteomics/EXPLORIS_1/analytic_20240419/20240419_C34969_004_S679723_oldBeads_2_Old.raw, /srv/www/htdocs//p34969/Proteomics/EXPLORIS_1/analytic_20240419/20240419_C34969_007_S679725_newBeads_1_New.raw, /srv/www/htdocs//p34969/Proteomics/EXPLORIS_1/analytic_20240419/20240419_C34969_005_S679724_oldBeads_3_Old.raw, /srv/www/htdocs//p34969/Proteomics/EXPLORIS_1/analytic_20240419/20240419_C34969_008_S679726_newBeads_2_New.raw vals$rawfile: /srv/www/htdocs//p34969/Proteomics/EXPLORIS_1/analytic_20240419/20240419_C34969_004_S679723_oldBeads_2_Old.raw, /srv/www/htdocs//p34969/Proteomics/EXPLORIS_1/analytic_20240419/20240419_C34969_007_S679725_newBeads_1_New.raw, /srv/www/htdocs//p34969/Proteomics/EXPLORIS_1/analytic_20240419/20240419_C34969_005_S679724_oldBeads_3_Old.raw, /srv/www/htdocs//p34969/Proteomics/EXPLORIS_1/analytic_20240419/20240419_C34969_008_S679726_newBeads_2_New.raw reading index for 20240419_C34969_004_S679723_oldBeads_2_Old.raw... reading took43.119seconds reading index for 20240419_C34969_007_S679725_newBeads_1_New.raw... reading took43.14seconds reading index for 20240419_C34969_005_S679724_oldBeads_3_Old.raw... reading took43.337seconds reading index for 20240419_C34969_008_S679726_newBeads_2_New.raw... reading took43.716seconds saving 'login and webservicepassword' ... Warning in resources$relativepath == input$relativepath : longer object length is not a multiple of shorter object length list(list(`_classname` = "workunit", `_id` = 302587, application = list(`_classname` = "application", `_id` = 225), container = list(`_classname` = "order", `_id` = 34969), created = "2024-04-22 10:42:08", createdby = "antdit", description = "input files:\np34969/Proteomics/EXPLORIS_1/analytic_20240419/20240419_C34969_004_S679723_oldBeads_2_Old.raw\np34969/Proteomics/EXPLORIS_1/analytic_20240419/20240419_C34969_005_S679724_oldBeads_3_Old.raw\np34969/Proteomics/EXPLORIS_1/analytic_20240419/20240419_C34969_007_S679725_newBeads_1_New.raw\np34969/Proteomics/EXPLORIS_1/analytic_20240419/20240419_C34969_008_S679726_newBeads_2_New.raw\n\nGenerated by Rpkg https://github.com/fgcz/bfabricShiny/ version 0.13.0.\nSystem information: Linux, 5.10.0-28-amd64, #1 SMP Debian 5.10.209-2 (2024-01-31), fgcz-c-072, x86_64, unknown, www-data, www-data\n\nTo help us funding further development, please cite:\n(bfabricSiny) PMID: 36073980 DOI: 10.1515/jib-2022-0031", exportable = "false", modified = "2024-04-22 10:42:08", modifiedby = "antdit", name = "plotTicBasepeak", status = "AVAILABLE"))list(list(`_classname` = "resource", `_id` = 2485766, container = list(`_classname` = "order", `_id` = 34969), created = "2024-04-22 10:42:09", createdby = "antdit", filechecksum = "19760015f23ceeb384ef822693f4ed86", junk = "false", modified = "2024-04-22 10:42:09", modifiedby = "antdit", name = "WU302587-20240422-1042-rawDiag.pdf", relativepath = "container_34969/workunit_302587/WU302587-20240422-1042-rawDiag.pdf", size = "33818", status = "available", storage = list(`_classname` = "storage", `_id` = 10), uri = list("https://fgcz-bfabric.uzh.ch/dmexternal/container_34969/workunit_302587/WU302587-20240422-1042-rawDiag.pdf", "scp://localhost/export/bfabric/data/b-fabric-external-repo/container_34969/workunit_302587/WU302587-20240422-1042-rawDiag.pdf"), workunit = list(`_classname` = "workunit", `_id` = 302587))) The current plot is available as workunit 302587. Rendering actionButton to link workunit 302587 in B-Fabric. saving 'login and webservicepassword' ... resourcesSelected: /srv/www/htdocs//p34969/Proteomics/EXPLORIS_1/analytic_20240419/20240419_C34969_003_S679722_oldBeads_1_Old.raw, /srv/www/htdocs//p34969/Proteomics/EXPLORIS_1/analytic_20240419/20240419_C34969_004_S679723_oldBeads_2_Old.raw, /srv/www/htdocs//p34969/Proteomics/EXPLORIS_1/analytic_20240419/20240419_C34969_009_S679727_newBeads_3_New.raw, /srv/www/htdocs//p34969/Proteomics/EXPLORIS_1/analytic_20240419/20240419_C34969_007_S679725_newBeads_1_New.raw, /srv/www/htdocs//p34969/Proteomics/EXPLORIS_1/analytic_20240419/20240419_C34969_005_S679724_oldBeads_3_Old.raw, /srv/www/htdocs//p34969/Proteomics/EXPLORIS_1/analytic_20240419/20240419_C34969_008_S679726_newBeads_2_New.raw vals$rawfile: /srv/www/htdocs//p34969/Proteomics/EXPLORIS_1/analytic_20240419/20240419_C34969_003_S679722_oldBeads_1_Old.raw, /srv/www/htdocs//p34969/Proteomics/EXPLORIS_1/analytic_20240419/20240419_C34969_004_S679723_oldBeads_2_Old.raw, /srv/www/htdocs//p34969/Proteomics/EXPLORIS_1/analytic_20240419/20240419_C34969_009_S679727_newBeads_3_New.raw, /srv/www/htdocs//p34969/Proteomics/EXPLORIS_1/analytic_20240419/20240419_C34969_007_S679725_newBeads_1_New.raw, /srv/www/htdocs//p34969/Proteomics/EXPLORIS_1/analytic_20240419/20240419_C34969_005_S679724_oldBeads_3_Old.raw, /srv/www/htdocs//p34969/Proteomics/EXPLORIS_1/analytic_20240419/20240419_C34969_008_S679726_newBeads_2_New.raw reading index for 20240419_C34969_004_S679723_oldBeads_2_Old.raw... reading took42.622seconds reading index for 20240419_C34969_009_S679727_newBeads_3_New.raw... reading took42.94seconds reading index for 20240419_C34969_005_S679724_oldBeads_3_Old.raw... reading took42.994seconds reading index for 20240419_C34969_003_S679722_oldBeads_1_Old.raw... reading took43.365seconds reading index for 20240419_C34969_008_S679726_newBeads_2_New.raw... reading took43.799seconds reading index for 20240419_C34969_007_S679725_newBeads_1_New.raw... reading took43.835seconds list(list(`_classname` = "workunit", `_id` = 302588, application = list(`_classname` = "application", `_id` = 225), container = list(`_classname` = "order", `_id` = 34969), created = "2024-04-22 10:44:11", createdby = "antdit", description = "input files:\np34969/Proteomics/EXPLORIS_1/analytic_20240419/20240419_C34969_004_S679723_oldBeads_2_Old.raw\np34969/Proteomics/EXPLORIS_1/analytic_20240419/20240419_C34969_005_S679724_oldBeads_3_Old.raw\np34969/Proteomics/EXPLORIS_1/analytic_20240419/20240419_C34969_007_S679725_newBeads_1_New.raw\np34969/Proteomics/EXPLORIS_1/analytic_20240419/20240419_C34969_008_S679726_newBeads_2_New.raw\np34969/Proteomics/EXPLORIS_1/analytic_20240419/20240419_C34969_003_S679722_oldBeads_1_Old.raw\np34969/Proteomics/EXPLORIS_1/analytic_20240419/20240419_C34969_009_S679727_newBeads_3_New.raw\n\nGenerated by Rpkg https://github.com/fgcz/bfabricShiny/ version 0.13.0.\nSystem information: Linux, 5.10.0-28-amd64, #1 SMP Debian 5.10.209-2 (2024-01-31), fgcz-c-072, x86_64, unknown, www-data, www-data\n\nTo help us funding further development, please cite:\n(bfabricSiny) PMID: 36073980 DOI: 10.1515/jib-2022-0031", exportable = "false", modified = "2024-04-22 10:44:11", modifiedby = "antdit", name = "plotTicBasepeak", status = "AVAILABLE"))list(list(`_classname` = "resource", `_id` = 2485768, container = list(`_classname` = "order", `_id` = 34969), created = "2024-04-22 10:44:11", createdby = "antdit", filechecksum = "6ae0886164d93a165694fb158acf1a76", junk = "false", modified = "2024-04-22 10:44:11", modifiedby = "antdit", name = "WU302588-20240422-1044-rawDiag.pdf", relativepath = "container_34969/workunit_302588/WU302588-20240422-1044-rawDiag.pdf", size = "49649", status = "available", storage = list(`_classname` = "storage", `_id` = 10), uri = list("https://fgcz-bfabric.uzh.ch/dmexternal/container_34969/workunit_302588/WU302588-20240422-1044-rawDiag.pdf", "scp://localhost/export/bfabric/data/b-fabric-external-repo/container_34969/workunit_302588/WU302588-20240422-1044-rawDiag.pdf"), workunit = list(`_classname` = "workunit", `_id` = 302588))) The current plot is available as workunit 302588. Rendering actionButton to link workunit 302588 in B-Fabric. plotInjectionTime plotMassDistribution Execution halted