Listening on http://127.0.0.1:37855 Loading required package: rawDiag Loading required package: bfabricShiny Attaching package: 'bfabricShiny' The following object is masked from 'package:base': save plotChargeState output$employee <- renderUI({ read bfabricposturl https://fgcz-c-072.uzh.ch:5000/. Warning in .read(login = login, webservicepassword = webservicepassword, : query failed. bfabricConnectionWorking FALSE saving 'login and webservicepassword' ... output$employee <- renderUI({ bfabricConnectionWorking TRUE 'empdegree' found. saving 'login and webservicepassword' ... saving 'login and webservicepassword' ... saving 'login and webservicepassword' ... plotTicBasepeak resourcesSelected: /srv/www/htdocs//p35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_003_S681179_JT-N3_1_Group_2.raw, /srv/www/htdocs//p35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_015_S681178_JT-DMSO_3_Group_1.raw, /srv/www/htdocs//p35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_004_S681186_JT-N2_2_Group_4.raw, /srv/www/htdocs//p35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_011_S681176_JT-DMSO_1_Group_1.raw, /srv/www/htdocs//p35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_012_S681185_JT-N2_1_Group_4.raw, /srv/www/htdocs//p35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_017_S681180_JT-N3_2_Group_2.raw, /srv/www/htdocs//p35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_013_S681183_JT-IA_2_Group_3.raw, /srv/www/htdocs//p35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_007_S681182_JT-IA_1_Group_3.raw, /srv/www/htdocs//p35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_016_S681177_JT-DMSO_2_Group_1.raw, /srv/www/htdocs//p35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_002_S681181_JT-N3_3_Group_2.raw, /srv/www/htdocs//p35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_006_S681184_JT-IA_3_Group_3.raw, /srv/www/htdocs//p35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_008_S681187_JT-N2_3_Group_4.raw vals$rawfile: /srv/www/htdocs//p35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_003_S681179_JT-N3_1_Group_2.raw, /srv/www/htdocs//p35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_015_S681178_JT-DMSO_3_Group_1.raw, /srv/www/htdocs//p35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_004_S681186_JT-N2_2_Group_4.raw, /srv/www/htdocs//p35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_011_S681176_JT-DMSO_1_Group_1.raw, /srv/www/htdocs//p35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_012_S681185_JT-N2_1_Group_4.raw, /srv/www/htdocs//p35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_017_S681180_JT-N3_2_Group_2.raw, /srv/www/htdocs//p35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_013_S681183_JT-IA_2_Group_3.raw, /srv/www/htdocs//p35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_007_S681182_JT-IA_1_Group_3.raw, /srv/www/htdocs//p35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_016_S681177_JT-DMSO_2_Group_1.raw, /srv/www/htdocs//p35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_002_S681181_JT-N3_3_Group_2.raw, /srv/www/htdocs//p35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_006_S681184_JT-IA_3_Group_3.raw, /srv/www/htdocs//p35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_008_S681187_JT-N2_3_Group_4.raw reading index for 20240425_C35016_006_S681184_JT-IA_3_Group_3.raw... reading took122.879seconds reading index for 20240425_C35016_013_S681183_JT-IA_2_Group_3.raw... reading took123.914seconds reading index for 20240425_C35016_011_S681176_JT-DMSO_1_Group_1.raw... reading took123.954seconds reading index for 20240425_C35016_002_S681181_JT-N3_3_Group_2.raw... reading took124.221seconds reading index for 20240425_C35016_008_S681187_JT-N2_3_Group_4.raw... reading took124.341seconds reading index for 20240425_C35016_007_S681182_JT-IA_1_Group_3.raw... reading took124.638seconds reading index for 20240425_C35016_003_S681179_JT-N3_1_Group_2.raw... reading took124.634seconds reading index for 20240425_C35016_012_S681185_JT-N2_1_Group_4.raw... reading took125.37seconds reading index for 20240425_C35016_004_S681186_JT-N2_2_Group_4.raw... reading took125.754seconds reading index for 20240425_C35016_015_S681178_JT-DMSO_3_Group_1.raw... reading took126.98seconds reading index for 20240425_C35016_016_S681177_JT-DMSO_2_Group_1.raw... reading took127.349seconds reading index for 20240425_C35016_017_S681180_JT-N3_2_Group_2.raw... reading took127.43seconds saving 'login and webservicepassword' ... list(list(`_classname` = "workunit", `_id` = 302810, application = list(`_classname` = "application", `_id` = 225), container = list(`_classname` = "order", `_id` = 35016), created = "2024-04-26 11:08:51", createdby = "tobiasko", description = "input files:\np35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_003_S681179_JT-N3_1_Group_2.raw \np35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_015_S681178_JT-DMSO_3_Group_1.raw\np35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_004_S681186_JT-N2_2_Group_4.raw \np35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_011_S681176_JT-DMSO_1_Group_1.raw\np35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_012_S681185_JT-N2_1_Group_4.raw \np35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_017_S681180_JT-N3_2_Group_2.raw \np35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_013_S681183_JT-IA_2_Group_3.raw \np35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_007_S681182_JT-IA_1_Group_3.raw \np35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_016_S681177_JT-DMSO_2_Group_1.raw\np35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_002_S681181_JT-N3_3_Group_2.raw \np35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_006_S681184_JT-IA_3_Group_3.raw \np35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_008_S681187_JT-N2_3_Group_4.raw \n\nGenerated by Rpkg https://github.com/fgcz/bfabricShiny/ version 0.13.0.\nSystem information: Linux, 5.10.0-28-amd64, #1 SMP Debian 5.10.209-2 (2024-01-31), fgcz-c-072, x86_64, unknown, www-data, www-data\n\nTo help us funding further development, please cite:\n(bfabricSiny) PMID: 36073980 DOI: 10.1515/jib-2022-0031", exportable = "false", inputresource = list(list(`_classname` = "resource", `_id` = 2490354), list(`_classname` = "resource", `_id` = 2490353), list(`_classname` = "resource", `_id` = 2490352), list(`_classname` = "resource", `_id` = 2490351), list(`_classname` = "resource", `_id` = 2490350), list(`_classname` = "resource", `_id` = 2490349), list(`_classname` = "resource", `_id` = 2490348), list(`_classname` = "resource", `_id` = 2490347), list(`_classname` = "resource", `_id` = 2490346), list( `_classname` = "resource", `_id` = 2490345), list(`_classname` = "resource", `_id` = 2490344), list(`_classname` = "resource", `_id` = 2490343)), modified = "2024-04-26 11:08:51", modifiedby = "tobiasko", name = "plotTicBasepeak", status = "AVAILABLE"))list(list(`_classname` = "resource", `_id` = 2490867, container = list(`_classname` = "order", `_id` = 35016), created = "2024-04-26 11:08:51", createdby = "tobiasko", filechecksum = "5269d7c1ad148306bfa24bff974115ea", junk = "false", modified = "2024-04-26 11:08:52", modifiedby = "tobiasko", name = "WU302810-20240426-1108-rawDiag.pdf", relativepath = "container_35016/workunit_302810/WU302810-20240426-1108-rawDiag.pdf", size = "100665", status = "available", storage = list(`_classname` = "storage", `_id` = 10), uri = list("https://fgcz-bfabric.uzh.ch/dmexternal/container_35016/workunit_302810/WU302810-20240426-1108-rawDiag.pdf", "scp://localhost/export/bfabric/data/b-fabric-external-repo/container_35016/workunit_302810/WU302810-20240426-1108-rawDiag.pdf"), workunit = list(`_classname` = "workunit", `_id` = 302810))) The current plot is available as workunit 302810. Rendering actionButton to link workunit 302810 in B-Fabric. saving 'login and webservicepassword' ... plotLockMassCorrection Rendering actionButton to link workunit 302810 in B-Fabric. list(list(`_classname` = "workunit", `_id` = 302811, application = list(`_classname` = "application", `_id` = 225), container = list(`_classname` = "order", `_id` = 35016), created = "2024-04-26 11:09:20", createdby = "tobiasko", description = "input files:\np35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_003_S681179_JT-N3_1_Group_2.raw \np35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_015_S681178_JT-DMSO_3_Group_1.raw\np35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_004_S681186_JT-N2_2_Group_4.raw \np35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_011_S681176_JT-DMSO_1_Group_1.raw\np35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_012_S681185_JT-N2_1_Group_4.raw \np35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_017_S681180_JT-N3_2_Group_2.raw \np35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_013_S681183_JT-IA_2_Group_3.raw \np35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_007_S681182_JT-IA_1_Group_3.raw \np35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_016_S681177_JT-DMSO_2_Group_1.raw\np35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_002_S681181_JT-N3_3_Group_2.raw \np35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_006_S681184_JT-IA_3_Group_3.raw \np35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_008_S681187_JT-N2_3_Group_4.raw \n\nGenerated by Rpkg https://github.com/fgcz/bfabricShiny/ version 0.13.0.\nSystem information: Linux, 5.10.0-28-amd64, #1 SMP Debian 5.10.209-2 (2024-01-31), fgcz-c-072, x86_64, unknown, www-data, www-data\n\nTo help us funding further development, please cite:\n(bfabricSiny) PMID: 36073980 DOI: 10.1515/jib-2022-0031", exportable = "false", inputresource = list(list(`_classname` = "resource", `_id` = 2490354), list(`_classname` = "resource", `_id` = 2490353), list(`_classname` = "resource", `_id` = 2490352), list(`_classname` = "resource", `_id` = 2490351), list(`_classname` = "resource", `_id` = 2490350), list(`_classname` = "resource", `_id` = 2490349), list(`_classname` = "resource", `_id` = 2490348), list(`_classname` = "resource", `_id` = 2490347), list(`_classname` = "resource", `_id` = 2490346), list( `_classname` = "resource", `_id` = 2490345), list(`_classname` = "resource", `_id` = 2490344), list(`_classname` = "resource", `_id` = 2490343)), modified = "2024-04-26 11:09:20", modifiedby = "tobiasko", name = "plotLockMassCorrection", status = "AVAILABLE"))list(list(`_classname` = "resource", `_id` = 2490868, container = list(`_classname` = "order", `_id` = 35016), created = "2024-04-26 11:09:20", createdby = "tobiasko", filechecksum = "dfe151a4d73b49c8e0b6d68130bc7a16", junk = "false", modified = "2024-04-26 11:09:20", modifiedby = "tobiasko", name = "WU302811-20240426-1109-rawDiag.pdf", relativepath = "container_35016/workunit_302811/WU302811-20240426-1109-rawDiag.pdf", size = "73958", status = "available", storage = list(`_classname` = "storage", `_id` = 10), uri = list("https://fgcz-bfabric.uzh.ch/dmexternal/container_35016/workunit_302811/WU302811-20240426-1109-rawDiag.pdf", "scp://localhost/export/bfabric/data/b-fabric-external-repo/container_35016/workunit_302811/WU302811-20240426-1109-rawDiag.pdf"), workunit = list(`_classname` = "workunit", `_id` = 302811))) The current plot is available as workunit 302811. Rendering actionButton to link workunit 302811 in B-Fabric. plotInjectionTime Rendering actionButton to link workunit 302811 in B-Fabric. list(list(`_classname` = "workunit", `_id` = 302812, application = list(`_classname` = "application", `_id` = 225), container = list(`_classname` = "order", `_id` = 35016), created = "2024-04-26 11:10:33", createdby = "tobiasko", description = "input files:\np35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_003_S681179_JT-N3_1_Group_2.raw \np35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_015_S681178_JT-DMSO_3_Group_1.raw\np35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_004_S681186_JT-N2_2_Group_4.raw \np35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_011_S681176_JT-DMSO_1_Group_1.raw\np35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_012_S681185_JT-N2_1_Group_4.raw \np35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_017_S681180_JT-N3_2_Group_2.raw \np35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_013_S681183_JT-IA_2_Group_3.raw \np35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_007_S681182_JT-IA_1_Group_3.raw \np35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_016_S681177_JT-DMSO_2_Group_1.raw\np35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_002_S681181_JT-N3_3_Group_2.raw \np35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_006_S681184_JT-IA_3_Group_3.raw \np35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_008_S681187_JT-N2_3_Group_4.raw \n\nGenerated by Rpkg https://github.com/fgcz/bfabricShiny/ version 0.13.0.\nSystem information: Linux, 5.10.0-28-amd64, #1 SMP Debian 5.10.209-2 (2024-01-31), fgcz-c-072, x86_64, unknown, www-data, www-data\n\nTo help us funding further development, please cite:\n(bfabricSiny) PMID: 36073980 DOI: 10.1515/jib-2022-0031", exportable = "false", inputresource = list(list(`_classname` = "resource", `_id` = 2490354), list(`_classname` = "resource", `_id` = 2490353), list(`_classname` = "resource", `_id` = 2490352), list(`_classname` = "resource", `_id` = 2490351), list(`_classname` = "resource", `_id` = 2490350), list(`_classname` = "resource", `_id` = 2490349), list(`_classname` = "resource", `_id` = 2490348), list(`_classname` = "resource", `_id` = 2490347), list(`_classname` = "resource", `_id` = 2490346), list( `_classname` = "resource", `_id` = 2490345), list(`_classname` = "resource", `_id` = 2490344), list(`_classname` = "resource", `_id` = 2490343)), modified = "2024-04-26 11:10:33", modifiedby = "tobiasko", name = "plotInjectionTime", status = "AVAILABLE"))list(list(`_classname` = "resource", `_id` = 2490869, container = list(`_classname` = "order", `_id` = 35016), created = "2024-04-26 11:10:34", createdby = "tobiasko", filechecksum = "232dcd1bf26376e6fa5daf9ae0ef9b71", junk = "false", modified = "2024-04-26 11:10:34", modifiedby = "tobiasko", name = "WU302812-20240426-1110-rawDiag.pdf", relativepath = "container_35016/workunit_302812/WU302812-20240426-1110-rawDiag.pdf", size = "1757495", status = "available", storage = list(`_classname` = "storage", `_id` = 10), uri = list("https://fgcz-bfabric.uzh.ch/dmexternal/container_35016/workunit_302812/WU302812-20240426-1110-rawDiag.pdf", "scp://localhost/export/bfabric/data/b-fabric-external-repo/container_35016/workunit_302812/WU302812-20240426-1110-rawDiag.pdf"), workunit = list(`_classname` = "workunit", `_id` = 302812))) The current plot is available as workunit 302812. Rendering actionButton to link workunit 302812 in B-Fabric. plotCycleTime Rendering actionButton to link workunit 302812 in B-Fabric. list(list(`_classname` = "workunit", `_id` = 302813, application = list(`_classname` = "application", `_id` = 225), container = list(`_classname` = "order", `_id` = 35016), created = "2024-04-26 11:10:58", createdby = "tobiasko", description = "input files:\np35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_003_S681179_JT-N3_1_Group_2.raw \np35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_015_S681178_JT-DMSO_3_Group_1.raw\np35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_004_S681186_JT-N2_2_Group_4.raw \np35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_011_S681176_JT-DMSO_1_Group_1.raw\np35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_012_S681185_JT-N2_1_Group_4.raw \np35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_017_S681180_JT-N3_2_Group_2.raw \np35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_013_S681183_JT-IA_2_Group_3.raw \np35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_007_S681182_JT-IA_1_Group_3.raw \np35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_016_S681177_JT-DMSO_2_Group_1.raw\np35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_002_S681181_JT-N3_3_Group_2.raw \np35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_006_S681184_JT-IA_3_Group_3.raw \np35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_008_S681187_JT-N2_3_Group_4.raw \n\nGenerated by Rpkg https://github.com/fgcz/bfabricShiny/ version 0.13.0.\nSystem information: Linux, 5.10.0-28-amd64, #1 SMP Debian 5.10.209-2 (2024-01-31), fgcz-c-072, x86_64, unknown, www-data, www-data\n\nTo help us funding further development, please cite:\n(bfabricSiny) PMID: 36073980 DOI: 10.1515/jib-2022-0031", exportable = "false", inputresource = list(list(`_classname` = "resource", `_id` = 2490354), list(`_classname` = "resource", `_id` = 2490353), list(`_classname` = "resource", `_id` = 2490352), list(`_classname` = "resource", `_id` = 2490351), list(`_classname` = "resource", `_id` = 2490350), list(`_classname` = "resource", `_id` = 2490349), list(`_classname` = "resource", `_id` = 2490348), list(`_classname` = "resource", `_id` = 2490347), list(`_classname` = "resource", `_id` = 2490346), list( `_classname` = "resource", `_id` = 2490345), list(`_classname` = "resource", `_id` = 2490344), list(`_classname` = "resource", `_id` = 2490343)), modified = "2024-04-26 11:10:58", modifiedby = "tobiasko", name = "plotCycleTime", status = "AVAILABLE"))list(list(`_classname` = "resource", `_id` = 2490870, container = list(`_classname` = "order", `_id` = 35016), created = "2024-04-26 11:10:59", createdby = "tobiasko", filechecksum = "689a5a0e21b72a0e2f4b9f87b3ad0ca9", junk = "false", modified = "2024-04-26 11:10:59", modifiedby = "tobiasko", name = "WU302813-20240426-1110-rawDiag.pdf", relativepath = "container_35016/workunit_302813/WU302813-20240426-1110-rawDiag.pdf", size = "111435", status = "available", storage = list(`_classname` = "storage", `_id` = 10), uri = list("https://fgcz-bfabric.uzh.ch/dmexternal/container_35016/workunit_302813/WU302813-20240426-1110-rawDiag.pdf", "scp://localhost/export/bfabric/data/b-fabric-external-repo/container_35016/workunit_302813/WU302813-20240426-1110-rawDiag.pdf"), workunit = list(`_classname` = "workunit", `_id` = 302813))) The current plot is available as workunit 302813. Rendering actionButton to link workunit 302813 in B-Fabric. plotMzDistribution Rendering actionButton to link workunit 302813 in B-Fabric. list(list(`_classname` = "workunit", `_id` = 302814, application = list(`_classname` = "application", `_id` = 225), container = list(`_classname` = "order", `_id` = 35016), created = "2024-04-26 11:12:27", createdby = "tobiasko", description = "input files:\np35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_003_S681179_JT-N3_1_Group_2.raw \np35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_015_S681178_JT-DMSO_3_Group_1.raw\np35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_004_S681186_JT-N2_2_Group_4.raw \np35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_011_S681176_JT-DMSO_1_Group_1.raw\np35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_012_S681185_JT-N2_1_Group_4.raw \np35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_017_S681180_JT-N3_2_Group_2.raw \np35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_013_S681183_JT-IA_2_Group_3.raw \np35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_007_S681182_JT-IA_1_Group_3.raw \np35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_016_S681177_JT-DMSO_2_Group_1.raw\np35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_002_S681181_JT-N3_3_Group_2.raw \np35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_006_S681184_JT-IA_3_Group_3.raw \np35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_008_S681187_JT-N2_3_Group_4.raw \n\nGenerated by Rpkg https://github.com/fgcz/bfabricShiny/ version 0.13.0.\nSystem information: Linux, 5.10.0-28-amd64, #1 SMP Debian 5.10.209-2 (2024-01-31), fgcz-c-072, x86_64, unknown, www-data, www-data\n\nTo help us funding further development, please cite:\n(bfabricSiny) PMID: 36073980 DOI: 10.1515/jib-2022-0031", exportable = "false", inputresource = list(list(`_classname` = "resource", `_id` = 2490354), list(`_classname` = "resource", `_id` = 2490353), list(`_classname` = "resource", `_id` = 2490352), list(`_classname` = "resource", `_id` = 2490351), list(`_classname` = "resource", `_id` = 2490350), list(`_classname` = "resource", `_id` = 2490349), list(`_classname` = "resource", `_id` = 2490348), list(`_classname` = "resource", `_id` = 2490347), list(`_classname` = "resource", `_id` = 2490346), list( `_classname` = "resource", `_id` = 2490345), list(`_classname` = "resource", `_id` = 2490344), list(`_classname` = "resource", `_id` = 2490343)), modified = "2024-04-26 11:12:27", modifiedby = "tobiasko", name = "plotMzDistribution", status = "AVAILABLE"))list(list(`_classname` = "resource", `_id` = 2490871, container = list(`_classname` = "order", `_id` = 35016), created = "2024-04-26 11:12:29", createdby = "tobiasko", filechecksum = "b509d896177190eae890c89e7520c2e0", junk = "false", modified = "2024-04-26 11:12:29", modifiedby = "tobiasko", name = "WU302814-20240426-1112-rawDiag.pdf", relativepath = "container_35016/workunit_302814/WU302814-20240426-1112-rawDiag.pdf", size = "4205185", status = "available", storage = list(`_classname` = "storage", `_id` = 10), uri = list("https://fgcz-bfabric.uzh.ch/dmexternal/container_35016/workunit_302814/WU302814-20240426-1112-rawDiag.pdf", "scp://localhost/export/bfabric/data/b-fabric-external-repo/container_35016/workunit_302814/WU302814-20240426-1112-rawDiag.pdf"), workunit = list(`_classname` = "workunit", `_id` = 302814))) The current plot is available as workunit 302814. Rendering actionButton to link workunit 302814 in B-Fabric. plotTicBasepeak Rendering actionButton to link workunit 302814 in B-Fabric. plotChargeState output$employee <- renderUI({ read bfabricposturl https://fgcz-c-072.uzh.ch:5000/. Warning in .read(login = login, webservicepassword = webservicepassword, : query failed. bfabricConnectionWorking FALSE saving 'login and webservicepassword' ... output$employee <- renderUI({ Warning in .read(login = login, webservicepassword = webservicepassword, : query failed. bfabricConnectionWorking FALSE Warning in shinyStore::updateStore(session, "login", isolate(input$login), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "webservicepassword", isolate(input$webservicepassword), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "project", isolate(input$project), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "login", isolate(input$login), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "webservicepassword", isolate(input$webservicepassword), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "project", isolate(input$project), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. output$employee <- renderUI({ bfabricConnectionWorking TRUE 'empdegree' found. Warning in shinyStore::updateStore(session, "login", isolate(input$login), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "webservicepassword", isolate(input$webservicepassword), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "project", isolate(input$project), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "login", isolate(input$login), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "webservicepassword", isolate(input$webservicepassword), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "project", isolate(input$project), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "login", isolate(input$login), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "webservicepassword", isolate(input$webservicepassword), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "project", isolate(input$project), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "login", isolate(input$login), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "webservicepassword", isolate(input$webservicepassword), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "project", isolate(input$project), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. resourcesSelected: /srv/www/htdocs//p3000/Proteomics/EXPLORIS_1/lkunz_20240125/20240125_003_autoQC03dda.raw, /srv/www/htdocs//p3000/Proteomics/EXPLORIS_1/lkunz_20231212/20231212_002_autoQC03dda.raw, /srv/www/htdocs//p3000/Proteomics/EXPLORIS_1/spfammatter_20240103/20240103_003_autoQC03dda.raw vals$rawfile: /srv/www/htdocs//p3000/Proteomics/EXPLORIS_1/lkunz_20240125/20240125_003_autoQC03dda.raw, /srv/www/htdocs//p3000/Proteomics/EXPLORIS_1/lkunz_20231212/20231212_002_autoQC03dda.raw, /srv/www/htdocs//p3000/Proteomics/EXPLORIS_1/spfammatter_20240103/20240103_003_autoQC03dda.raw reading index for 20231212_002_autoQC03dda.raw... reading took45.152seconds reading index for 20240103_003_autoQC03dda.raw... reading took46.427seconds reading index for 20240125_003_autoQC03dda.raw... reading took49.414seconds plotTicBasepeak plotCycleTime plotLockMassCorrection Execution halted