Listening on http://127.0.0.1:36321 Loading required package: rawDiag Loading required package: bfabricShiny Attaching package: 'bfabricShiny' The following object is masked from 'package:base': save plotChargeState output$employee <- renderUI({ read bfabricposturl https://fgcz-c-072.uzh.ch:5000/. Warning in .read(login = login, webservicepassword = webservicepassword, : query failed. bfabricConnectionWorking FALSE saving 'login and webservicepassword' ... output$employee <- renderUI({ bfabricConnectionWorking TRUE 'empdegree' found. saving 'login and webservicepassword' ... saving 'login and webservicepassword' ... saving 'login and webservicepassword' ... resourcesSelected: /srv/www/htdocs//p34994/Proteomics/EXPLORIS_1/roschi_20240515_SQ_analysis/20240515_020_S680319_FMT-D_004_ble.raw, /srv/www/htdocs//p34994/Proteomics/EXPLORIS_1/roschi_20240515_SQ_analysis/20240515_050_S680355_FMT-R_011_12w.raw, /srv/www/htdocs//p34994/Proteomics/EXPLORIS_1/roschi_20240515_SQ_analysis/20240515_042_S680335_FMT-R_001_06w.raw, /srv/www/htdocs//p34994/Proteomics/EXPLORIS_1/roschi_20240515_SQ_analysis/20240515_053_S680349_FMT-R_004_12w.raw, /srv/www/htdocs//p34994/Proteomics/EXPLORIS_1/roschi_20240515_SQ_analysis/20240515_064_S680366_FMT-R_016_24w.raw, /srv/www/htdocs//p34994/Proteomics/EXPLORIS_1/roschi_20240515_SQ_analysis/20240515_004_S680321_FMT-R_001_ble.raw, /srv/www/htdocs//p34994/Proteomics/EXPLORIS_1/roschi_20240515_SQ_analysis/20240515_034_S680341_FMT-R_009_06w.raw, /srv/www/htdocs//p34994/Proteomics/EXPLORIS_1/roschi_20240515_SQ_analysis/20240515_045_S680347_FMT-R_001_12w.raw, /srv/www/htdocs//p34994/Proteomics/EXPLORIS_1/roschi_20240515_SQ_analysis/20240515_038_S680330_FMT-R_010_ble.raw, /srv/www/htdocs//p34994/Proteomics/EXPLORIS_1/roschi_20240515_SQ_analysis/20240515_018_S680339_FMT-R_007_06w.raw vals$rawfile: /srv/www/htdocs//p34994/Proteomics/EXPLORIS_1/roschi_20240515_SQ_analysis/20240515_020_S680319_FMT-D_004_ble.raw, /srv/www/htdocs//p34994/Proteomics/EXPLORIS_1/roschi_20240515_SQ_analysis/20240515_050_S680355_FMT-R_011_12w.raw, /srv/www/htdocs//p34994/Proteomics/EXPLORIS_1/roschi_20240515_SQ_analysis/20240515_042_S680335_FMT-R_001_06w.raw, /srv/www/htdocs//p34994/Proteomics/EXPLORIS_1/roschi_20240515_SQ_analysis/20240515_053_S680349_FMT-R_004_12w.raw, /srv/www/htdocs//p34994/Proteomics/EXPLORIS_1/roschi_20240515_SQ_analysis/20240515_064_S680366_FMT-R_016_24w.raw, /srv/www/htdocs//p34994/Proteomics/EXPLORIS_1/roschi_20240515_SQ_analysis/20240515_004_S680321_FMT-R_001_ble.raw, /srv/www/htdocs//p34994/Proteomics/EXPLORIS_1/roschi_20240515_SQ_analysis/20240515_034_S680341_FMT-R_009_06w.raw, /srv/www/htdocs//p34994/Proteomics/EXPLORIS_1/roschi_20240515_SQ_analysis/20240515_045_S680347_FMT-R_001_12w.raw, /srv/www/htdocs//p34994/Proteomics/EXPLORIS_1/roschi_20240515_SQ_analysis/20240515_038_S680330_FMT-R_010_ble.raw, /srv/www/htdocs//p34994/Proteomics/EXPLORIS_1/roschi_20240515_SQ_analysis/20240515_018_S680339_FMT-R_007_06w.raw reading index for 20240515_064_S680366_FMT-R_016_24w.raw... reading index for 20240515_018_S680339_FMT-R_007_06w.raw... reading index for 20240515_053_S680349_FMT-R_004_12w.raw... reading index for 20240515_004_S680321_FMT-R_001_ble.raw... reading index for 20240515_020_S680319_FMT-D_004_ble.raw... reading index for 20240515_050_S680355_FMT-R_011_12w.raw... reading index for 20240515_038_S680330_FMT-R_010_ble.raw... reading index for 20240515_034_S680341_FMT-R_009_06w.raw... reading index for 20240515_042_S680335_FMT-R_001_06w.raw... reading index for 20240515_045_S680347_FMT-R_001_12w.raw... plotTicBasepeak saving 'login and webservicepassword' ... Warning in resources$relativepath == input$relativepath : longer object length is not a multiple of shorter object length list(list(`_classname` = "workunit", `_id` = 303782, application = list(`_classname` = "application", `_id` = 225), container = list(`_classname` = "order", `_id` = 34994), created = "2024-05-23 15:56:57", createdby = "roschi", description = "input files:\np34994/Proteomics/EXPLORIS_1/roschi_20240515_SQ_analysis/20240515_018_S680339_FMT-R_007_06w.raw\np34994/Proteomics/EXPLORIS_1/roschi_20240515_SQ_analysis/20240515_038_S680330_FMT-R_010_ble.raw\np34994/Proteomics/EXPLORIS_1/roschi_20240515_SQ_analysis/20240515_045_S680347_FMT-R_001_12w.raw\np34994/Proteomics/EXPLORIS_1/roschi_20240515_SQ_analysis/20240515_034_S680341_FMT-R_009_06w.raw\np34994/Proteomics/EXPLORIS_1/roschi_20240515_SQ_analysis/20240515_004_S680321_FMT-R_001_ble.raw\np34994/Proteomics/EXPLORIS_1/roschi_20240515_SQ_analysis/20240515_064_S680366_FMT-R_016_24w.raw\np34994/Proteomics/EXPLORIS_1/roschi_20240515_SQ_analysis/20240515_053_S680349_FMT-R_004_12w.raw\np34994/Proteomics/EXPLORIS_1/roschi_20240515_SQ_analysis/20240515_042_S680335_FMT-R_001_06w.raw\np34994/Proteomics/EXPLORIS_1/roschi_20240515_SQ_analysis/20240515_050_S680355_FMT-R_011_12w.raw\np34994/Proteomics/EXPLORIS_1/roschi_20240515_SQ_analysis/20240515_020_S680319_FMT-D_004_ble.raw\n\nGenerated by Rpkg https://github.com/fgcz/bfabricShiny/ version 0.13.0.\nSystem information: Linux, 5.10.0-28-amd64, #1 SMP Debian 5.10.209-2 (2024-01-31), fgcz-c-072, x86_64, unknown, www-data, www-data\n\nTo help us funding further development, please cite:\n(bfabricSiny) PMID: 36073980 DOI: 10.1515/jib-2022-0031", exportable = "false", inputresource = list(list(`_classname` = "resource", `_id` = 2503840), list(`_classname` = "resource", `_id` = 2503827)), modified = "2024-05-23 15:56:57", modifiedby = "roschi", name = "plotTicBasepeak", status = "AVAILABLE"))list(list(`_classname` = "resource", `_id` = 2505316, container = list(`_classname` = "order", `_id` = 34994), created = "2024-05-23 15:56:58", createdby = "roschi", filechecksum = "15bc485cde201cf6f3f155774dda2675", junk = "false", modified = "2024-05-23 15:56:58", modifiedby = "roschi", name = "WU303782-20240523-1556-rawDiag.pdf", relativepath = "container_34994/workunit_303782/WU303782-20240523-1556-rawDiag.pdf", size = "796875", status = "available", storage = list(`_classname` = "storage", `_id` = 10), uri = list("https://fgcz-bfabric.uzh.ch/dmexternal/container_34994/workunit_303782/WU303782-20240523-1556-rawDiag.pdf", "scp://localhost/export/bfabric/data/b-fabric-external-repo/container_34994/workunit_303782/WU303782-20240523-1556-rawDiag.pdf"), workunit = list(`_classname` = "workunit", `_id` = 303782))) The current plot is available as workunit 303782. Rendering actionButton to link workunit 303782 in B-Fabric. saving 'login and webservicepassword' ... resourcesSelected: /srv/www/htdocs//p34994/Proteomics/EXPLORIS_1/roschi_20240515_SQ_analysis/20240515_020_S680319_FMT-D_004_ble.raw, /srv/www/htdocs//p34994/Proteomics/EXPLORIS_1/roschi_20240515_SQ_analysis/20240515_050_S680355_FMT-R_011_12w.raw, /srv/www/htdocs//p34994/Proteomics/EXPLORIS_1/roschi_20240515_SQ_analysis/20240515_042_S680335_FMT-R_001_06w.raw, /srv/www/htdocs//p34994/Proteomics/EXPLORIS_1/roschi_20240515_SQ_analysis/20240515_053_S680349_FMT-R_004_12w.raw, /srv/www/htdocs//p34994/Proteomics/EXPLORIS_1/roschi_20240515_SQ_analysis/20240515_064_S680366_FMT-R_016_24w.raw, /srv/www/htdocs//p34994/Proteomics/EXPLORIS_1/roschi_20240515_SQ_analysis/20240515_004_S680321_FMT-R_001_ble.raw, /srv/www/htdocs//p34994/Proteomics/EXPLORIS_1/roschi_20240515_SQ_analysis/20240515_034_S680341_FMT-R_009_06w.raw, /srv/www/htdocs//p34994/Proteomics/EXPLORIS_1/roschi_20240515_SQ_analysis/20240515_045_S680347_FMT-R_001_12w.raw, /srv/www/htdocs//p34994/Proteomics/EXPLORIS_1/roschi_20240515_SQ_analysis/20240515_038_S680330_FMT-R_010_ble.raw, /srv/www/htdocs//p34994/Proteomics/EXPLORIS_1/roschi_20240515_SQ_analysis/20240515_018_S680339_FMT-R_007_06w.raw vals$rawfile: /srv/www/htdocs//p34994/Proteomics/EXPLORIS_1/roschi_20240515_SQ_analysis/20240515_020_S680319_FMT-D_004_ble.raw, /srv/www/htdocs//p34994/Proteomics/EXPLORIS_1/roschi_20240515_SQ_analysis/20240515_050_S680355_FMT-R_011_12w.raw, /srv/www/htdocs//p34994/Proteomics/EXPLORIS_1/roschi_20240515_SQ_analysis/20240515_042_S680335_FMT-R_001_06w.raw, /srv/www/htdocs//p34994/Proteomics/EXPLORIS_1/roschi_20240515_SQ_analysis/20240515_053_S680349_FMT-R_004_12w.raw, /srv/www/htdocs//p34994/Proteomics/EXPLORIS_1/roschi_20240515_SQ_analysis/20240515_064_S680366_FMT-R_016_24w.raw, /srv/www/htdocs//p34994/Proteomics/EXPLORIS_1/roschi_20240515_SQ_analysis/20240515_004_S680321_FMT-R_001_ble.raw, /srv/www/htdocs//p34994/Proteomics/EXPLORIS_1/roschi_20240515_SQ_analysis/20240515_034_S680341_FMT-R_009_06w.raw, /srv/www/htdocs//p34994/Proteomics/EXPLORIS_1/roschi_20240515_SQ_analysis/20240515_045_S680347_FMT-R_001_12w.raw, /srv/www/htdocs//p34994/Proteomics/EXPLORIS_1/roschi_20240515_SQ_analysis/20240515_038_S680330_FMT-R_010_ble.raw, /srv/www/htdocs//p34994/Proteomics/EXPLORIS_1/roschi_20240515_SQ_analysis/20240515_018_S680339_FMT-R_007_06w.raw Execution halted