Listening on http://127.0.0.1:36419 Loading required package: rawDiag Loading required package: bfabricShiny Attaching package: 'bfabricShiny' The following object is masked from 'package:base': save plotChargeState output$employee <- renderUI({ read bfabricposturl https://fgcz-c-072.uzh.ch:5000/. Warning in .read(login = login, webservicepassword = webservicepassword, : query failed. bfabricConnectionWorking FALSE saving 'login and webservicepassword' ... Warning in .read(login = login, webservicepassword = webservicepassword, : query failed. bfabricConnectionWorking FALSE output$employee <- renderUI({ Warning in .read(login = login, webservicepassword = webservicepassword, : query failed. bfabricConnectionWorking FALSE output$employee <- renderUI({ bfabricConnectionWorking TRUE 'empdegree' found. Warning in shinyStore::updateStore(session, "login", isolate(input$login), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "webservicepassword", isolate(input$webservicepassword), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "project", isolate(input$project), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "login", isolate(input$login), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "webservicepassword", isolate(input$webservicepassword), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "project", isolate(input$project), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "login", isolate(input$login), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "webservicepassword", isolate(input$webservicepassword), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "project", isolate(input$project), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "login", isolate(input$login), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "webservicepassword", isolate(input$webservicepassword), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. Warning in shinyStore::updateStore(session, "project", isolate(input$project), : Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user. resourcesSelected: /srv/www/htdocs//p35189/Proteomics/LUMOS_1/analytic_20240530/20240530_C35189_003_S695303_XplaceH1B0Y_Purified_supernatant.raw, /srv/www/htdocs//p35189/Proteomics/LUMOS_1/analytic_20240529/20240529_C35189_002_S690891_HiCultS9J0Y_Subcellular_fraction.raw vals$rawfile: /srv/www/htdocs//p35189/Proteomics/LUMOS_1/analytic_20240530/20240530_C35189_003_S695303_XplaceH1B0Y_Purified_supernatant.raw, /srv/www/htdocs//p35189/Proteomics/LUMOS_1/analytic_20240529/20240529_C35189_002_S690891_HiCultS9J0Y_Subcellular_fraction.raw reading index for 20240529_C35189_002_S690891_HiCultS9J0Y_Subcellular_fraction.raw... reading index for 20240530_C35189_003_S695303_XplaceH1B0Y_Purified_supernatant.raw... plotInjectionTime output$employee <- renderUI({ read bfabricposturl https://fgcz-c-072.uzh.ch:5000/. Warning in .read(login = login, webservicepassword = webservicepassword, : query failed. bfabricConnectionWorking FALSE saving 'login and webservicepassword' ... output$employee <- renderUI({ bfabricConnectionWorking TRUE 'empdegree' found. saving 'login and webservicepassword' ... saving 'login and webservicepassword' ... saving 'login and webservicepassword' ... resourcesSelected: /srv/www/htdocs//p35243/Proteomics/EXPLORIS_2/analytic_20240603/20240603_C35243_002_S692846_Bait2_Pulldown_Cells.raw, /srv/www/htdocs//p35243/Proteomics/EXPLORIS_2/analytic_20240603/20240603_C35243_003_S692850_NC_UV3_Pulldown_Cells_NC.raw, /srv/www/htdocs//p35243/Proteomics/EXPLORIS_2/analytic_20240603/20240603_C35243_009_S692847_Bait3_Pulldown_Cells.raw, /srv/www/htdocs//p35243/Proteomics/EXPLORIS_2/analytic_20240603/20240603_C35243_007_S692845_Bait1_Pulldown_Cells.raw, /srv/www/htdocs//p35243/Proteomics/EXPLORIS_2/analytic_20240603/20240603_C35243_008_S692848_NC_UV1_Pulldown_Cells_NC.raw, /srv/www/htdocs//p35243/Proteomics/EXPLORIS_2/analytic_20240603/20240603_C35243_004_S692849_NC_UV2_Pulldown_Cells_NC.raw vals$rawfile: /srv/www/htdocs//p35243/Proteomics/EXPLORIS_2/analytic_20240603/20240603_C35243_002_S692846_Bait2_Pulldown_Cells.raw, /srv/www/htdocs//p35243/Proteomics/EXPLORIS_2/analytic_20240603/20240603_C35243_003_S692850_NC_UV3_Pulldown_Cells_NC.raw, /srv/www/htdocs//p35243/Proteomics/EXPLORIS_2/analytic_20240603/20240603_C35243_009_S692847_Bait3_Pulldown_Cells.raw, /srv/www/htdocs//p35243/Proteomics/EXPLORIS_2/analytic_20240603/20240603_C35243_007_S692845_Bait1_Pulldown_Cells.raw, /srv/www/htdocs//p35243/Proteomics/EXPLORIS_2/analytic_20240603/20240603_C35243_008_S692848_NC_UV1_Pulldown_Cells_NC.raw, /srv/www/htdocs//p35243/Proteomics/EXPLORIS_2/analytic_20240603/20240603_C35243_004_S692849_NC_UV2_Pulldown_Cells_NC.raw reading index for 20240603_C35243_008_S692848_NC_UV1_Pulldown_Cells_NC.raw... reading index for 20240603_C35243_003_S692850_NC_UV3_Pulldown_Cells_NC.raw... reading index for 20240603_C35243_002_S692846_Bait2_Pulldown_Cells.raw... reading index for 20240603_C35243_009_S692847_Bait3_Pulldown_Cells.raw... reading index for 20240603_C35243_004_S692849_NC_UV2_Pulldown_Cells_NC.raw... reading index for 20240603_C35243_007_S692845_Bait1_Pulldown_Cells.raw... plotTicBasepeak resourcesSelected: /srv/www/htdocs//p35243/Proteomics/EXPLORIS_2/analytic_20240603/20240603_C35243_002_S692846_Bait2_Pulldown_Cells.raw, /srv/www/htdocs//p35243/Proteomics/EXPLORIS_2/analytic_20240603/20240603_C35243_003_S692850_NC_UV3_Pulldown_Cells_NC.raw, /srv/www/htdocs//p35243/Proteomics/EXPLORIS_2/analytic_20240603/20240603_C35243_009_S692847_Bait3_Pulldown_Cells.raw, /srv/www/htdocs//p35243/Proteomics/EXPLORIS_2/analytic_20240603/20240603_C35243_007_S692845_Bait1_Pulldown_Cells.raw, /srv/www/htdocs//p35243/Proteomics/EXPLORIS_2/analytic_20240603/20240603_C35243_008_S692848_NC_UV1_Pulldown_Cells_NC.raw, /srv/www/htdocs//p35243/Proteomics/EXPLORIS_2/analytic_20240603/20240603_C35243_004_S692849_NC_UV2_Pulldown_Cells_NC.raw vals$rawfile: /srv/www/htdocs//p35243/Proteomics/EXPLORIS_2/analytic_20240603/20240603_C35243_002_S692846_Bait2_Pulldown_Cells.raw, /srv/www/htdocs//p35243/Proteomics/EXPLORIS_2/analytic_20240603/20240603_C35243_003_S692850_NC_UV3_Pulldown_Cells_NC.raw, /srv/www/htdocs//p35243/Proteomics/EXPLORIS_2/analytic_20240603/20240603_C35243_009_S692847_Bait3_Pulldown_Cells.raw, /srv/www/htdocs//p35243/Proteomics/EXPLORIS_2/analytic_20240603/20240603_C35243_007_S692845_Bait1_Pulldown_Cells.raw, /srv/www/htdocs//p35243/Proteomics/EXPLORIS_2/analytic_20240603/20240603_C35243_008_S692848_NC_UV1_Pulldown_Cells_NC.raw, /srv/www/htdocs//p35243/Proteomics/EXPLORIS_2/analytic_20240603/20240603_C35243_004_S692849_NC_UV2_Pulldown_Cells_NC.raw Warning: Error in +: non-numeric argument to binary operator 1: runApp plotTicBasepeak output$employee <- renderUI({ read bfabricposturl https://fgcz-c-072.uzh.ch:5000/. Warning in .read(login = login, webservicepassword = webservicepassword, : query failed. bfabricConnectionWorking FALSE saving 'login and webservicepassword' ... output$employee <- renderUI({ bfabricConnectionWorking TRUE 'empdegree' found. saving 'login and webservicepassword' ... saving 'login and webservicepassword' ... saving 'login and webservicepassword' ... resourcesSelected: /srv/www/htdocs//p35243/Proteomics/EXPLORIS_2/analytic_20240603/20240603_C35243_002_S692846_Bait2_Pulldown_Cells.raw, /srv/www/htdocs//p35243/Proteomics/EXPLORIS_2/analytic_20240603/20240603_C35243_003_S692850_NC_UV3_Pulldown_Cells_NC.raw, /srv/www/htdocs//p35243/Proteomics/EXPLORIS_2/analytic_20240603/20240603_C35243_009_S692847_Bait3_Pulldown_Cells.raw, /srv/www/htdocs//p35243/Proteomics/EXPLORIS_2/analytic_20240603/20240603_C35243_007_S692845_Bait1_Pulldown_Cells.raw, /srv/www/htdocs//p35243/Proteomics/EXPLORIS_2/analytic_20240603/20240603_C35243_008_S692848_NC_UV1_Pulldown_Cells_NC.raw, /srv/www/htdocs//p35243/Proteomics/EXPLORIS_2/analytic_20240603/20240603_C35243_004_S692849_NC_UV2_Pulldown_Cells_NC.raw vals$rawfile: /srv/www/htdocs//p35243/Proteomics/EXPLORIS_2/analytic_20240603/20240603_C35243_002_S692846_Bait2_Pulldown_Cells.raw, /srv/www/htdocs//p35243/Proteomics/EXPLORIS_2/analytic_20240603/20240603_C35243_003_S692850_NC_UV3_Pulldown_Cells_NC.raw, /srv/www/htdocs//p35243/Proteomics/EXPLORIS_2/analytic_20240603/20240603_C35243_009_S692847_Bait3_Pulldown_Cells.raw, /srv/www/htdocs//p35243/Proteomics/EXPLORIS_2/analytic_20240603/20240603_C35243_007_S692845_Bait1_Pulldown_Cells.raw, /srv/www/htdocs//p35243/Proteomics/EXPLORIS_2/analytic_20240603/20240603_C35243_008_S692848_NC_UV1_Pulldown_Cells_NC.raw, /srv/www/htdocs//p35243/Proteomics/EXPLORIS_2/analytic_20240603/20240603_C35243_004_S692849_NC_UV2_Pulldown_Cells_NC.raw reading index for 20240603_C35243_009_S692847_Bait3_Pulldown_Cells.raw... reading index for 20240603_C35243_008_S692848_NC_UV1_Pulldown_Cells_NC.raw... reading index for 20240603_C35243_002_S692846_Bait2_Pulldown_Cells.raw... reading index for 20240603_C35243_007_S692845_Bait1_Pulldown_Cells.raw... reading index for 20240603_C35243_003_S692850_NC_UV3_Pulldown_Cells_NC.raw... reading index for 20240603_C35243_004_S692849_NC_UV2_Pulldown_Cells_NC.raw... saving 'login and webservicepassword' ... list(list(`_classname` = "workunit", `_id` = 304189, application = list(`_classname` = "application", `_id` = 225), container = list(`_classname` = "order", `_id` = 35243), created = "2024-06-04 11:02:48", createdby = "tobiasko", description = "input files:\np35243/Proteomics/EXPLORIS_2/analytic_20240603/20240603_C35243_002_S692846_Bait2_Pulldown_Cells.raw \np35243/Proteomics/EXPLORIS_2/analytic_20240603/20240603_C35243_003_S692850_NC_UV3_Pulldown_Cells_NC.raw\np35243/Proteomics/EXPLORIS_2/analytic_20240603/20240603_C35243_009_S692847_Bait3_Pulldown_Cells.raw \np35243/Proteomics/EXPLORIS_2/analytic_20240603/20240603_C35243_007_S692845_Bait1_Pulldown_Cells.raw \np35243/Proteomics/EXPLORIS_2/analytic_20240603/20240603_C35243_008_S692848_NC_UV1_Pulldown_Cells_NC.raw\np35243/Proteomics/EXPLORIS_2/analytic_20240603/20240603_C35243_004_S692849_NC_UV2_Pulldown_Cells_NC.raw\n\nGenerated by Rpkg https://github.com/fgcz/bfabricShiny/ version 0.13.0.\nSystem information: Linux, 5.10.0-28-amd64, #1 SMP Debian 5.10.209-2 (2024-01-31), fgcz-c-072, x86_64, unknown, www-data, www-data\n\nTo help us funding further development, please cite:\n(bfabricSiny) PMID: 36073980 DOI: 10.1515/jib-2022-0031", exportable = "false", inputresource = list(list(`_classname` = "resource", `_id` = 2511420), list(`_classname` = "resource", `_id` = 2511419), list(`_classname` = "resource", `_id` = 2511418), list(`_classname` = "resource", `_id` = 2511417), list(`_classname` = "resource", `_id` = 2511416), list(`_classname` = "resource", `_id` = 2511415)), modified = "2024-06-04 11:02:48", modifiedby = "tobiasko", name = "plotTicBasepeak", status = "AVAILABLE"))list(list(`_classname` = "resource", `_id` = 2512100, container = list(`_classname` = "order", `_id` = 35243), created = "2024-06-04 11:02:48", createdby = "tobiasko", filechecksum = "2160b94da1c63b150561a827930bbf5d", junk = "false", modified = "2024-06-04 11:02:48", modifiedby = "tobiasko", name = "WU304189-20240604-1102-rawDiag.pdf", relativepath = "container_35243/workunit_304189/WU304189-20240604-1102-rawDiag.pdf", size = "84879", status = "available", storage = list(`_classname` = "storage", `_id` = 10), uri = list("https://fgcz-bfabric.uzh.ch/dmexternal/container_35243/workunit_304189/WU304189-20240604-1102-rawDiag.pdf", "scp://localhost/export/bfabric/data/b-fabric-external-repo/container_35243/workunit_304189/WU304189-20240604-1102-rawDiag.pdf"), workunit = list(`_classname` = "workunit", `_id` = 304189))) The current plot is available as workunit 304189. Rendering actionButton to link workunit 304189 in B-Fabric. saving 'login and webservicepassword' ... plotLockMassCorrection list(list(`_classname` = "workunit", `_id` = 304190, application = list(`_classname` = "application", `_id` = 225), container = list(`_classname` = "order", `_id` = 35243), created = "2024-06-04 11:03:08", createdby = "tobiasko", description = "input files:\np35243/Proteomics/EXPLORIS_2/analytic_20240603/20240603_C35243_002_S692846_Bait2_Pulldown_Cells.raw \np35243/Proteomics/EXPLORIS_2/analytic_20240603/20240603_C35243_003_S692850_NC_UV3_Pulldown_Cells_NC.raw\np35243/Proteomics/EXPLORIS_2/analytic_20240603/20240603_C35243_009_S692847_Bait3_Pulldown_Cells.raw \np35243/Proteomics/EXPLORIS_2/analytic_20240603/20240603_C35243_007_S692845_Bait1_Pulldown_Cells.raw \np35243/Proteomics/EXPLORIS_2/analytic_20240603/20240603_C35243_008_S692848_NC_UV1_Pulldown_Cells_NC.raw\np35243/Proteomics/EXPLORIS_2/analytic_20240603/20240603_C35243_004_S692849_NC_UV2_Pulldown_Cells_NC.raw\n\nGenerated by Rpkg https://github.com/fgcz/bfabricShiny/ version 0.13.0.\nSystem information: Linux, 5.10.0-28-amd64, #1 SMP Debian 5.10.209-2 (2024-01-31), fgcz-c-072, x86_64, unknown, www-data, www-data\n\nTo help us funding further development, please cite:\n(bfabricSiny) PMID: 36073980 DOI: 10.1515/jib-2022-0031", exportable = "false", inputresource = list(list(`_classname` = "resource", `_id` = 2511420), list(`_classname` = "resource", `_id` = 2511419), list(`_classname` = "resource", `_id` = 2511418), list(`_classname` = "resource", `_id` = 2511417), list(`_classname` = "resource", `_id` = 2511416), list(`_classname` = "resource", `_id` = 2511415)), modified = "2024-06-04 11:03:08", modifiedby = "tobiasko", name = "plotLockMassCorrection", status = "AVAILABLE"))list(list(`_classname` = "resource", `_id` = 2512108, container = list(`_classname` = "order", `_id` = 35243), created = "2024-06-04 11:03:08", createdby = "tobiasko", filechecksum = "b4726875a4140a737d7334177aea854f", junk = "false", modified = "2024-06-04 11:03:08", modifiedby = "tobiasko", name = "WU304190-20240604-1103-rawDiag.pdf", relativepath = "container_35243/workunit_304190/WU304190-20240604-1103-rawDiag.pdf", size = "38349", status = "available", storage = list(`_classname` = "storage", `_id` = 10), uri = list("https://fgcz-bfabric.uzh.ch/dmexternal/container_35243/workunit_304190/WU304190-20240604-1103-rawDiag.pdf", "scp://localhost/export/bfabric/data/b-fabric-external-repo/container_35243/workunit_304190/WU304190-20240604-1103-rawDiag.pdf"), workunit = list(`_classname` = "workunit", `_id` = 304190))) The current plot is available as workunit 304190. Rendering actionButton to link workunit 304190 in B-Fabric. plotInjectionTime list(list(`_classname` = "workunit", `_id` = 304192, application = list(`_classname` = "application", `_id` = 225), container = list(`_classname` = "order", `_id` = 35243), created = "2024-06-04 11:03:50", createdby = "tobiasko", description = "input files:\np35243/Proteomics/EXPLORIS_2/analytic_20240603/20240603_C35243_002_S692846_Bait2_Pulldown_Cells.raw \np35243/Proteomics/EXPLORIS_2/analytic_20240603/20240603_C35243_003_S692850_NC_UV3_Pulldown_Cells_NC.raw\np35243/Proteomics/EXPLORIS_2/analytic_20240603/20240603_C35243_009_S692847_Bait3_Pulldown_Cells.raw \np35243/Proteomics/EXPLORIS_2/analytic_20240603/20240603_C35243_007_S692845_Bait1_Pulldown_Cells.raw \np35243/Proteomics/EXPLORIS_2/analytic_20240603/20240603_C35243_008_S692848_NC_UV1_Pulldown_Cells_NC.raw\np35243/Proteomics/EXPLORIS_2/analytic_20240603/20240603_C35243_004_S692849_NC_UV2_Pulldown_Cells_NC.raw\n\nGenerated by Rpkg https://github.com/fgcz/bfabricShiny/ version 0.13.0.\nSystem information: Linux, 5.10.0-28-amd64, #1 SMP Debian 5.10.209-2 (2024-01-31), fgcz-c-072, x86_64, unknown, www-data, www-data\n\nTo help us funding further development, please cite:\n(bfabricSiny) PMID: 36073980 DOI: 10.1515/jib-2022-0031", exportable = "false", inputresource = list(list(`_classname` = "resource", `_id` = 2511420), list(`_classname` = "resource", `_id` = 2511419), list(`_classname` = "resource", `_id` = 2511418), list(`_classname` = "resource", `_id` = 2511417), list(`_classname` = "resource", `_id` = 2511416), list(`_classname` = "resource", `_id` = 2511415)), modified = "2024-06-04 11:03:50", modifiedby = "tobiasko", name = "plotInjectionTime", status = "AVAILABLE"))list(list(`_classname` = "resource", `_id` = 2512125, container = list(`_classname` = "order", `_id` = 35243), created = "2024-06-04 11:03:50", createdby = "tobiasko", filechecksum = "7e2f168b682d277fd2928249703f52fa", junk = "false", modified = "2024-06-04 11:03:50", modifiedby = "tobiasko", name = "WU304192-20240604-1103-rawDiag.pdf", relativepath = "container_35243/workunit_304192/WU304192-20240604-1103-rawDiag.pdf", size = "997377", status = "available", storage = list(`_classname` = "storage", `_id` = 10), uri = list("https://fgcz-bfabric.uzh.ch/dmexternal/container_35243/workunit_304192/WU304192-20240604-1103-rawDiag.pdf", "scp://localhost/export/bfabric/data/b-fabric-external-repo/container_35243/workunit_304192/WU304192-20240604-1103-rawDiag.pdf"), workunit = list(`_classname` = "workunit", `_id` = 304192))) The current plot is available as workunit 304192. Rendering actionButton to link workunit 304192 in B-Fabric. plotTicBasepeak plotChargeState output$employee <- renderUI({ read bfabricposturl https://fgcz-c-072.uzh.ch:5000/. Warning in .read(login = login, webservicepassword = webservicepassword, : query failed. bfabricConnectionWorking FALSE saving 'login and webservicepassword' ... plotMassDistribution plotScanTime plotInjectionTime plotChargeState output$employee <- renderUI({ read bfabricposturl https://fgcz-c-072.uzh.ch:5000/. Warning in .read(login = login, webservicepassword = webservicepassword, : query failed. bfabricConnectionWorking FALSE saving 'login and webservicepassword' ... output$employee <- renderUI({ Warning in .read(login = login, webservicepassword = webservicepassword, : query failed. bfabricConnectionWorking FALSE output$employee <- renderUI({ bfabricConnectionWorking TRUE 'empdegree' found. saving 'login and webservicepassword' ... saving 'login and webservicepassword' ... saving 'login and webservicepassword' ... plotTicBasepeak resourcesSelected: /srv/www/htdocs//p35421/Proteomics/EXPLORIS_2/analytic_20240606/20240608_C35421_003_S705058_4h_biotin_2_Group_1.raw, /srv/www/htdocs//p35421/Proteomics/EXPLORIS_2/analytic_20240606/20240608_C35421_010_S705054_no_biotin_2_Control.raw, /srv/www/htdocs//p35421/Proteomics/EXPLORIS_2/analytic_20240606/20240608_C35421_005_S705056_no_botin_4_Control.raw, /srv/www/htdocs//p35421/Proteomics/EXPLORIS_2/analytic_20240606/20240608_C35421_009_S705055_no_biotin_3_Control.raw, /srv/www/htdocs//p35421/Proteomics/EXPLORIS_2/analytic_20240606/20240608_C35421_011_S705057_4h_biotin_1_Group_1.raw, /srv/www/htdocs//p35421/Proteomics/EXPLORIS_2/analytic_20240606/20240608_C35421_002_S705059_4h_biotin_3_Group_1.raw, /srv/www/htdocs//p35421/Proteomics/EXPLORIS_2/analytic_20240606/20240608_C35421_008_S705060_4h_biotin_4_Group_1.raw, /srv/www/htdocs//p35421/Proteomics/EXPLORIS_2/analytic_20240606/20240608_C35421_004_S705053_no_biotin_1_Control.raw vals$rawfile: /srv/www/htdocs//p35421/Proteomics/EXPLORIS_2/analytic_20240606/20240608_C35421_003_S705058_4h_biotin_2_Group_1.raw, /srv/www/htdocs//p35421/Proteomics/EXPLORIS_2/analytic_20240606/20240608_C35421_010_S705054_no_biotin_2_Control.raw, /srv/www/htdocs//p35421/Proteomics/EXPLORIS_2/analytic_20240606/20240608_C35421_005_S705056_no_botin_4_Control.raw, /srv/www/htdocs//p35421/Proteomics/EXPLORIS_2/analytic_20240606/20240608_C35421_009_S705055_no_biotin_3_Control.raw, /srv/www/htdocs//p35421/Proteomics/EXPLORIS_2/analytic_20240606/20240608_C35421_011_S705057_4h_biotin_1_Group_1.raw, /srv/www/htdocs//p35421/Proteomics/EXPLORIS_2/analytic_20240606/20240608_C35421_002_S705059_4h_biotin_3_Group_1.raw, /srv/www/htdocs//p35421/Proteomics/EXPLORIS_2/analytic_20240606/20240608_C35421_008_S705060_4h_biotin_4_Group_1.raw, /srv/www/htdocs//p35421/Proteomics/EXPLORIS_2/analytic_20240606/20240608_C35421_004_S705053_no_biotin_1_Control.raw reading index for 20240608_C35421_009_S705055_no_biotin_3_Control.raw... reading index for 20240608_C35421_010_S705054_no_biotin_2_Control.raw... reading index for 20240608_C35421_011_S705057_4h_biotin_1_Group_1.raw... reading index for 20240608_C35421_005_S705056_no_botin_4_Control.raw... reading index for 20240608_C35421_004_S705053_no_biotin_1_Control.raw... reading index for 20240608_C35421_008_S705060_4h_biotin_4_Group_1.raw... reading index for 20240608_C35421_003_S705058_4h_biotin_2_Group_1.raw... reading index for 20240608_C35421_002_S705059_4h_biotin_3_Group_1.raw... saving 'login and webservicepassword' ... list(list(`_classname` = "workunit", `_id` = 304373, application = list(`_classname` = "application", `_id` = 225), container = list(`_classname` = "order", `_id` = 35421), created = "2024-06-10 10:12:03", createdby = "tobiasko", description = "input files:\np35421/Proteomics/EXPLORIS_2/analytic_20240606/20240608_C35421_003_S705058_4h_biotin_2_Group_1.raw\np35421/Proteomics/EXPLORIS_2/analytic_20240606/20240608_C35421_010_S705054_no_biotin_2_Control.raw\np35421/Proteomics/EXPLORIS_2/analytic_20240606/20240608_C35421_005_S705056_no_botin_4_Control.raw \np35421/Proteomics/EXPLORIS_2/analytic_20240606/20240608_C35421_009_S705055_no_biotin_3_Control.raw\np35421/Proteomics/EXPLORIS_2/analytic_20240606/20240608_C35421_011_S705057_4h_biotin_1_Group_1.raw\np35421/Proteomics/EXPLORIS_2/analytic_20240606/20240608_C35421_002_S705059_4h_biotin_3_Group_1.raw\np35421/Proteomics/EXPLORIS_2/analytic_20240606/20240608_C35421_008_S705060_4h_biotin_4_Group_1.raw\np35421/Proteomics/EXPLORIS_2/analytic_20240606/20240608_C35421_004_S705053_no_biotin_1_Control.raw\n\nGenerated by Rpkg https://github.com/fgcz/bfabricShiny/ version 0.13.0.\nSystem information: Linux, 5.10.0-28-amd64, #1 SMP Debian 5.10.209-2 (2024-01-31), fgcz-c-072, x86_64, unknown, www-data, www-data\n\nTo help us funding further development, please cite:\n(bfabricSiny) PMID: 36073980 DOI: 10.1515/jib-2022-0031", exportable = "false", inputresource = list(list(`_classname` = "resource", `_id` = 2515205), list(`_classname` = "resource", `_id` = 2515204), list(`_classname` = "resource", `_id` = 2515203), list(`_classname` = "resource", `_id` = 2515202), list(`_classname` = "resource", `_id` = 2515201), list(`_classname` = "resource", `_id` = 2515200), list(`_classname` = "resource", `_id` = 2515199), list(`_classname` = "resource", `_id` = 2515198)), modified = "2024-06-10 10:12:03", modifiedby = "tobiasko", name = "plotTicBasepeak", status = "AVAILABLE"))list(list(`_classname` = "resource", `_id` = 2515209, container = list(`_classname` = "order", `_id` = 35421), created = "2024-06-10 10:12:03", createdby = "tobiasko", filechecksum = "9cc783f8035885bced69a0bb3fb731c9", junk = "false", modified = "2024-06-10 10:12:03", modifiedby = "tobiasko", name = "WU304373-20240610-1012-rawDiag.pdf", relativepath = "container_35421/workunit_304373/WU304373-20240610-1012-rawDiag.pdf", size = "101786", status = "available", storage = list(`_classname` = "storage", `_id` = 10), uri = list("https://fgcz-bfabric.uzh.ch/dmexternal/container_35421/workunit_304373/WU304373-20240610-1012-rawDiag.pdf", "scp://localhost/export/bfabric/data/b-fabric-external-repo/container_35421/workunit_304373/WU304373-20240610-1012-rawDiag.pdf"), workunit = list(`_classname` = "workunit", `_id` = 304373))) The current plot is available as workunit 304373. Rendering actionButton to link workunit 304373 in B-Fabric. saving 'login and webservicepassword' ... plotLockMassCorrection list(list(`_classname` = "workunit", `_id` = 304374, application = list(`_classname` = "application", `_id` = 225), container = list(`_classname` = "order", `_id` = 35421), created = "2024-06-10 10:13:22", createdby = "tobiasko", description = "input files:\np35421/Proteomics/EXPLORIS_2/analytic_20240606/20240608_C35421_003_S705058_4h_biotin_2_Group_1.raw\np35421/Proteomics/EXPLORIS_2/analytic_20240606/20240608_C35421_010_S705054_no_biotin_2_Control.raw\np35421/Proteomics/EXPLORIS_2/analytic_20240606/20240608_C35421_005_S705056_no_botin_4_Control.raw \np35421/Proteomics/EXPLORIS_2/analytic_20240606/20240608_C35421_009_S705055_no_biotin_3_Control.raw\np35421/Proteomics/EXPLORIS_2/analytic_20240606/20240608_C35421_011_S705057_4h_biotin_1_Group_1.raw\np35421/Proteomics/EXPLORIS_2/analytic_20240606/20240608_C35421_002_S705059_4h_biotin_3_Group_1.raw\np35421/Proteomics/EXPLORIS_2/analytic_20240606/20240608_C35421_008_S705060_4h_biotin_4_Group_1.raw\np35421/Proteomics/EXPLORIS_2/analytic_20240606/20240608_C35421_004_S705053_no_biotin_1_Control.raw\n\nGenerated by Rpkg https://github.com/fgcz/bfabricShiny/ version 0.13.0.\nSystem information: Linux, 5.10.0-28-amd64, #1 SMP Debian 5.10.209-2 (2024-01-31), fgcz-c-072, x86_64, unknown, www-data, www-data\n\nTo help us funding further development, please cite:\n(bfabricSiny) PMID: 36073980 DOI: 10.1515/jib-2022-0031", exportable = "false", inputresource = list(list(`_classname` = "resource", `_id` = 2515205), list(`_classname` = "resource", `_id` = 2515204), list(`_classname` = "resource", `_id` = 2515203), list(`_classname` = "resource", `_id` = 2515202), list(`_classname` = "resource", `_id` = 2515201), list(`_classname` = "resource", `_id` = 2515200), list(`_classname` = "resource", `_id` = 2515199), list(`_classname` = "resource", `_id` = 2515198)), modified = "2024-06-10 10:13:22", modifiedby = "tobiasko", name = "plotLockMassCorrection", status = "AVAILABLE"))list(list(`_classname` = "resource", `_id` = 2515210, container = list(`_classname` = "order", `_id` = 35421), created = "2024-06-10 10:13:22", createdby = "tobiasko", filechecksum = "a3a49d677be0daa08341aa35e7081500", junk = "false", modified = "2024-06-10 10:13:22", modifiedby = "tobiasko", name = "WU304374-20240610-1013-rawDiag.pdf", relativepath = "container_35421/workunit_304374/WU304374-20240610-1013-rawDiag.pdf", size = "50039", status = "available", storage = list(`_classname` = "storage", `_id` = 10), uri = list("https://fgcz-bfabric.uzh.ch/dmexternal/container_35421/workunit_304374/WU304374-20240610-1013-rawDiag.pdf", "scp://localhost/export/bfabric/data/b-fabric-external-repo/container_35421/workunit_304374/WU304374-20240610-1013-rawDiag.pdf"), workunit = list(`_classname` = "workunit", `_id` = 304374))) The current plot is available as workunit 304374. Rendering actionButton to link workunit 304374 in B-Fabric. plotInjectionTime list(list(`_classname` = "workunit", `_id` = 304375, application = list(`_classname` = "application", `_id` = 225), container = list(`_classname` = "order", `_id` = 35421), created = "2024-06-10 10:14:16", createdby = "tobiasko", description = "input files:\np35421/Proteomics/EXPLORIS_2/analytic_20240606/20240608_C35421_003_S705058_4h_biotin_2_Group_1.raw\np35421/Proteomics/EXPLORIS_2/analytic_20240606/20240608_C35421_010_S705054_no_biotin_2_Control.raw\np35421/Proteomics/EXPLORIS_2/analytic_20240606/20240608_C35421_005_S705056_no_botin_4_Control.raw \np35421/Proteomics/EXPLORIS_2/analytic_20240606/20240608_C35421_009_S705055_no_biotin_3_Control.raw\np35421/Proteomics/EXPLORIS_2/analytic_20240606/20240608_C35421_011_S705057_4h_biotin_1_Group_1.raw\np35421/Proteomics/EXPLORIS_2/analytic_20240606/20240608_C35421_002_S705059_4h_biotin_3_Group_1.raw\np35421/Proteomics/EXPLORIS_2/analytic_20240606/20240608_C35421_008_S705060_4h_biotin_4_Group_1.raw\np35421/Proteomics/EXPLORIS_2/analytic_20240606/20240608_C35421_004_S705053_no_biotin_1_Control.raw\n\nGenerated by Rpkg https://github.com/fgcz/bfabricShiny/ version 0.13.0.\nSystem information: Linux, 5.10.0-28-amd64, #1 SMP Debian 5.10.209-2 (2024-01-31), fgcz-c-072, x86_64, unknown, www-data, www-data\n\nTo help us funding further development, please cite:\n(bfabricSiny) PMID: 36073980 DOI: 10.1515/jib-2022-0031", exportable = "false", inputresource = list(list(`_classname` = "resource", `_id` = 2515205), list(`_classname` = "resource", `_id` = 2515204), list(`_classname` = "resource", `_id` = 2515203), list(`_classname` = "resource", `_id` = 2515202), list(`_classname` = "resource", `_id` = 2515201), list(`_classname` = "resource", `_id` = 2515200), list(`_classname` = "resource", `_id` = 2515199), list(`_classname` = "resource", `_id` = 2515198)), modified = "2024-06-10 10:14:16", modifiedby = "tobiasko", name = "plotInjectionTime", status = "AVAILABLE"))list(list(`_classname` = "resource", `_id` = 2515211, container = list(`_classname` = "order", `_id` = 35421), created = "2024-06-10 10:14:16", createdby = "tobiasko", filechecksum = "0332f80cdd360c27d0d01162f9e27f81", junk = "false", modified = "2024-06-10 10:14:17", modifiedby = "tobiasko", name = "WU304375-20240610-1014-rawDiag.pdf", relativepath = "container_35421/workunit_304375/WU304375-20240610-1014-rawDiag.pdf", size = "876282", status = "available", storage = list(`_classname` = "storage", `_id` = 10), uri = list("https://fgcz-bfabric.uzh.ch/dmexternal/container_35421/workunit_304375/WU304375-20240610-1014-rawDiag.pdf", "scp://localhost/export/bfabric/data/b-fabric-external-repo/container_35421/workunit_304375/WU304375-20240610-1014-rawDiag.pdf"), workunit = list(`_classname` = "workunit", `_id` = 304375))) The current plot is available as workunit 304375. Rendering actionButton to link workunit 304375 in B-Fabric. plotMzDistribution list(list(`_classname` = "workunit", `_id` = 304376, application = list(`_classname` = "application", `_id` = 225), container = list(`_classname` = "order", `_id` = 35421), created = "2024-06-10 10:15:08", createdby = "tobiasko", description = "input files:\np35421/Proteomics/EXPLORIS_2/analytic_20240606/20240608_C35421_003_S705058_4h_biotin_2_Group_1.raw\np35421/Proteomics/EXPLORIS_2/analytic_20240606/20240608_C35421_010_S705054_no_biotin_2_Control.raw\np35421/Proteomics/EXPLORIS_2/analytic_20240606/20240608_C35421_005_S705056_no_botin_4_Control.raw \np35421/Proteomics/EXPLORIS_2/analytic_20240606/20240608_C35421_009_S705055_no_biotin_3_Control.raw\np35421/Proteomics/EXPLORIS_2/analytic_20240606/20240608_C35421_011_S705057_4h_biotin_1_Group_1.raw\np35421/Proteomics/EXPLORIS_2/analytic_20240606/20240608_C35421_002_S705059_4h_biotin_3_Group_1.raw\np35421/Proteomics/EXPLORIS_2/analytic_20240606/20240608_C35421_008_S705060_4h_biotin_4_Group_1.raw\np35421/Proteomics/EXPLORIS_2/analytic_20240606/20240608_C35421_004_S705053_no_biotin_1_Control.raw\n\nGenerated by Rpkg https://github.com/fgcz/bfabricShiny/ version 0.13.0.\nSystem information: Linux, 5.10.0-28-amd64, #1 SMP Debian 5.10.209-2 (2024-01-31), fgcz-c-072, x86_64, unknown, www-data, www-data\n\nTo help us funding further development, please cite:\n(bfabricSiny) PMID: 36073980 DOI: 10.1515/jib-2022-0031", exportable = "false", inputresource = list(list(`_classname` = "resource", `_id` = 2515205), list(`_classname` = "resource", `_id` = 2515204), list(`_classname` = "resource", `_id` = 2515203), list(`_classname` = "resource", `_id` = 2515202), list(`_classname` = "resource", `_id` = 2515201), list(`_classname` = "resource", `_id` = 2515200), list(`_classname` = "resource", `_id` = 2515199), list(`_classname` = "resource", `_id` = 2515198)), modified = "2024-06-10 10:15:08", modifiedby = "tobiasko", name = "plotMzDistribution", status = "AVAILABLE"))list(list(`_classname` = "resource", `_id` = 2515212, container = list(`_classname` = "order", `_id` = 35421), created = "2024-06-10 10:15:09", createdby = "tobiasko", filechecksum = "d5318f8679900680710332409f1df043", junk = "false", modified = "2024-06-10 10:15:09", modifiedby = "tobiasko", name = "WU304376-20240610-1015-rawDiag.pdf", relativepath = "container_35421/workunit_304376/WU304376-20240610-1015-rawDiag.pdf", size = "2799456", status = "available", storage = list(`_classname` = "storage", `_id` = 10), uri = list("https://fgcz-bfabric.uzh.ch/dmexternal/container_35421/workunit_304376/WU304376-20240610-1015-rawDiag.pdf", "scp://localhost/export/bfabric/data/b-fabric-external-repo/container_35421/workunit_304376/WU304376-20240610-1015-rawDiag.pdf"), workunit = list(`_classname` = "workunit", `_id` = 304376))) The current plot is available as workunit 304376. Rendering actionButton to link workunit 304376 in B-Fabric. plotLockMassCorrection resourcesSelected: /srv/www/htdocs//p35429/Proteomics/LUMOS_2/analytic_20240606/20240607_C35429_007_S705313_JT-MDA-DMSO_3_Group_1.raw, /srv/www/htdocs//p35429/Proteomics/LUMOS_2/analytic_20240606/20240607_C35429_013_S705318_JT-MDA-IA_2_Group_3.raw, /srv/www/htdocs//p35429/Proteomics/LUMOS_2/analytic_20240606/20240607_C35429_010_S705322_JT-MDA-N2_3_Group_4.raw, /srv/www/htdocs//p35429/Proteomics/LUMOS_2/analytic_20240606/20240607_C35429_002_S705316_JT-MDA-N3_3_Group_2.raw, /srv/www/htdocs//p35429/Proteomics/LUMOS_2/analytic_20240606/20240607_C35429_015_S705321_JT-MDA-N2_2_Group_4.raw, /srv/www/htdocs//p35429/Proteomics/LUMOS_2/analytic_20240606/20240607_C35429_006_S705320_JT-MDA-N2_1_Group_4.raw, /srv/www/htdocs//p35429/Proteomics/LUMOS_2/analytic_20240606/20240607_C35429_012_S705315_JT-MDA-N3_2_Group_2.raw, /srv/www/htdocs//p35429/Proteomics/LUMOS_2/analytic_20240606/20240607_C35429_011_S705312_JT-MDA-DMSO_2_Group_1.raw, /srv/www/htdocs//p35429/Proteomics/LUMOS_2/analytic_20240606/20240607_C35429_014_S705314_JT-MDA-N3_1_Group_2.raw, /srv/www/htdocs//p35429/Proteomics/LUMOS_2/analytic_20240606/20240607_C35429_005_S705317_JT-MDA-IA_1_Group_3.raw, /srv/www/htdocs//p35429/Proteomics/LUMOS_2/analytic_20240606/20240607_C35429_003_S705311_JT-MDA-DMSO_1_Group_1.raw, /srv/www/htdocs//p35429/Proteomics/LUMOS_2/analytic_20240606/20240607_C35429_004_S705319_JT-MDA-IA_3_Group_3.raw vals$rawfile: /srv/www/htdocs//p35429/Proteomics/LUMOS_2/analytic_20240606/20240607_C35429_007_S705313_JT-MDA-DMSO_3_Group_1.raw, /srv/www/htdocs//p35429/Proteomics/LUMOS_2/analytic_20240606/20240607_C35429_013_S705318_JT-MDA-IA_2_Group_3.raw, /srv/www/htdocs//p35429/Proteomics/LUMOS_2/analytic_20240606/20240607_C35429_010_S705322_JT-MDA-N2_3_Group_4.raw, /srv/www/htdocs//p35429/Proteomics/LUMOS_2/analytic_20240606/20240607_C35429_002_S705316_JT-MDA-N3_3_Group_2.raw, /srv/www/htdocs//p35429/Proteomics/LUMOS_2/analytic_20240606/20240607_C35429_015_S705321_JT-MDA-N2_2_Group_4.raw, /srv/www/htdocs//p35429/Proteomics/LUMOS_2/analytic_20240606/20240607_C35429_006_S705320_JT-MDA-N2_1_Group_4.raw, /srv/www/htdocs//p35429/Proteomics/LUMOS_2/analytic_20240606/20240607_C35429_012_S705315_JT-MDA-N3_2_Group_2.raw, /srv/www/htdocs//p35429/Proteomics/LUMOS_2/analytic_20240606/20240607_C35429_011_S705312_JT-MDA-DMSO_2_Group_1.raw, /srv/www/htdocs//p35429/Proteomics/LUMOS_2/analytic_20240606/20240607_C35429_014_S705314_JT-MDA-N3_1_Group_2.raw, /srv/www/htdocs//p35429/Proteomics/LUMOS_2/analytic_20240606/20240607_C35429_005_S705317_JT-MDA-IA_1_Group_3.raw, /srv/www/htdocs//p35429/Proteomics/LUMOS_2/analytic_20240606/20240607_C35429_003_S705311_JT-MDA-DMSO_1_Group_1.raw, /srv/www/htdocs//p35429/Proteomics/LUMOS_2/analytic_20240606/20240607_C35429_004_S705319_JT-MDA-IA_3_Group_3.raw reading index for 20240607_C35429_010_S705322_JT-MDA-N2_3_Group_4.raw... reading index for 20240607_C35429_011_S705312_JT-MDA-DMSO_2_Group_1.raw... reading index for 20240607_C35429_015_S705321_JT-MDA-N2_2_Group_4.raw... reading index for 20240607_C35429_012_S705315_JT-MDA-N3_2_Group_2.raw... reading index for 20240607_C35429_003_S705311_JT-MDA-DMSO_1_Group_1.raw... reading index for 20240607_C35429_007_S705313_JT-MDA-DMSO_3_Group_1.raw... reading index for 20240607_C35429_013_S705318_JT-MDA-IA_2_Group_3.raw... reading index for 20240607_C35429_005_S705317_JT-MDA-IA_1_Group_3.raw... reading index for 20240607_C35429_006_S705320_JT-MDA-N2_1_Group_4.raw... reading index for 20240607_C35429_002_S705316_JT-MDA-N3_3_Group_2.raw... reading index for 20240607_C35429_014_S705314_JT-MDA-N3_1_Group_2.raw... reading index for 20240607_C35429_004_S705319_JT-MDA-IA_3_Group_3.raw... Warning: Error in : Discrete value supplied to continuous scale 188: stop 187: train_continuous 186: self$range$train 185: train 184: scales[[i]][[method]] 183: FUN 182: lapply 181: FUN 180: lapply 179: scale_apply 178: train_scales 177: self$facet$train_scales 176: train_position 175: layout$train_position 174: ggplot_build.ggplot 172: print.ggplot 167: func 165: f 164: Reduce 155: do 154: hybrid_chain 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$OrbitrapFun02-plot 1: runApp plotTicBasepeak list(list(`_classname` = "workunit", `_id` = 304378, application = list(`_classname` = "application", `_id` = 225), container = list(`_classname` = "order", `_id` = 35429), created = "2024-06-10 10:28:08", createdby = "tobiasko", description = "input files:\np35429/Proteomics/LUMOS_2/analytic_20240606/20240607_C35429_007_S705313_JT-MDA-DMSO_3_Group_1.raw\np35429/Proteomics/LUMOS_2/analytic_20240606/20240607_C35429_013_S705318_JT-MDA-IA_2_Group_3.raw \np35429/Proteomics/LUMOS_2/analytic_20240606/20240607_C35429_010_S705322_JT-MDA-N2_3_Group_4.raw \np35429/Proteomics/LUMOS_2/analytic_20240606/20240607_C35429_002_S705316_JT-MDA-N3_3_Group_2.raw \np35429/Proteomics/LUMOS_2/analytic_20240606/20240607_C35429_015_S705321_JT-MDA-N2_2_Group_4.raw \np35429/Proteomics/LUMOS_2/analytic_20240606/20240607_C35429_006_S705320_JT-MDA-N2_1_Group_4.raw \np35429/Proteomics/LUMOS_2/analytic_20240606/20240607_C35429_012_S705315_JT-MDA-N3_2_Group_2.raw \np35429/Proteomics/LUMOS_2/analytic_20240606/20240607_C35429_011_S705312_JT-MDA-DMSO_2_Group_1.raw\np35429/Proteomics/LUMOS_2/analytic_20240606/20240607_C35429_014_S705314_JT-MDA-N3_1_Group_2.raw \np35429/Proteomics/LUMOS_2/analytic_20240606/20240607_C35429_005_S705317_JT-MDA-IA_1_Group_3.raw \np35429/Proteomics/LUMOS_2/analytic_20240606/20240607_C35429_003_S705311_JT-MDA-DMSO_1_Group_1.raw\np35429/Proteomics/LUMOS_2/analytic_20240606/20240607_C35429_004_S705319_JT-MDA-IA_3_Group_3.raw \n\nGenerated by Rpkg https://github.com/fgcz/bfabricShiny/ version 0.13.0.\nSystem information: Linux, 5.10.0-28-amd64, #1 SMP Debian 5.10.209-2 (2024-01-31), fgcz-c-072, x86_64, unknown, www-data, www-data\n\nTo help us funding further development, please cite:\n(bfabricSiny) PMID: 36073980 DOI: 10.1515/jib-2022-0031", exportable = "false", inputresource = list(list(`_classname` = "resource", `_id` = 2515172), list(`_classname` = "resource", `_id` = 2515171), list(`_classname` = "resource", `_id` = 2515170), list(`_classname` = "resource", `_id` = 2515169), list(`_classname` = "resource", `_id` = 2515168), list(`_classname` = "resource", `_id` = 2515167), list(`_classname` = "resource", `_id` = 2515166), list(`_classname` = "resource", `_id` = 2515165), list(`_classname` = "resource", `_id` = 2515164), list( `_classname` = "resource", `_id` = 2515163), list(`_classname` = "resource", `_id` = 2515162), list(`_classname` = "resource", `_id` = 2515161)), modified = "2024-06-10 10:28:08", modifiedby = "tobiasko", name = "plotTicBasepeak", status = "AVAILABLE"))list(list(`_classname` = "resource", `_id` = 2515216, container = list(`_classname` = "order", `_id` = 35429), created = "2024-06-10 10:28:08", createdby = "tobiasko", filechecksum = "11c2e7e3945615c890646e93da65cbeb", junk = "false", modified = "2024-06-10 10:28:08", modifiedby = "tobiasko", name = "WU304378-20240610-1028-rawDiag.pdf", relativepath = "container_35429/workunit_304378/WU304378-20240610-1028-rawDiag.pdf", size = "87978", status = "available", storage = list(`_classname` = "storage", `_id` = 10), uri = list("https://fgcz-bfabric.uzh.ch/dmexternal/container_35429/workunit_304378/WU304378-20240610-1028-rawDiag.pdf", "scp://localhost/export/bfabric/data/b-fabric-external-repo/container_35429/workunit_304378/WU304378-20240610-1028-rawDiag.pdf"), workunit = list(`_classname` = "workunit", `_id` = 304378))) The current plot is available as workunit 304378. Rendering actionButton to link workunit 304378 in B-Fabric. plotMzDistribution list(list(`_classname` = "workunit", `_id` = 304379, application = list(`_classname` = "application", `_id` = 225), container = list(`_classname` = "order", `_id` = 35429), created = "2024-06-10 10:30:00", createdby = "tobiasko", description = "input files:\np35429/Proteomics/LUMOS_2/analytic_20240606/20240607_C35429_007_S705313_JT-MDA-DMSO_3_Group_1.raw\np35429/Proteomics/LUMOS_2/analytic_20240606/20240607_C35429_013_S705318_JT-MDA-IA_2_Group_3.raw \np35429/Proteomics/LUMOS_2/analytic_20240606/20240607_C35429_010_S705322_JT-MDA-N2_3_Group_4.raw \np35429/Proteomics/LUMOS_2/analytic_20240606/20240607_C35429_002_S705316_JT-MDA-N3_3_Group_2.raw \np35429/Proteomics/LUMOS_2/analytic_20240606/20240607_C35429_015_S705321_JT-MDA-N2_2_Group_4.raw \np35429/Proteomics/LUMOS_2/analytic_20240606/20240607_C35429_006_S705320_JT-MDA-N2_1_Group_4.raw \np35429/Proteomics/LUMOS_2/analytic_20240606/20240607_C35429_012_S705315_JT-MDA-N3_2_Group_2.raw \np35429/Proteomics/LUMOS_2/analytic_20240606/20240607_C35429_011_S705312_JT-MDA-DMSO_2_Group_1.raw\np35429/Proteomics/LUMOS_2/analytic_20240606/20240607_C35429_014_S705314_JT-MDA-N3_1_Group_2.raw \np35429/Proteomics/LUMOS_2/analytic_20240606/20240607_C35429_005_S705317_JT-MDA-IA_1_Group_3.raw \np35429/Proteomics/LUMOS_2/analytic_20240606/20240607_C35429_003_S705311_JT-MDA-DMSO_1_Group_1.raw\np35429/Proteomics/LUMOS_2/analytic_20240606/20240607_C35429_004_S705319_JT-MDA-IA_3_Group_3.raw \n\nGenerated by Rpkg https://github.com/fgcz/bfabricShiny/ version 0.13.0.\nSystem information: Linux, 5.10.0-28-amd64, #1 SMP Debian 5.10.209-2 (2024-01-31), fgcz-c-072, x86_64, unknown, www-data, www-data\n\nTo help us funding further development, please cite:\n(bfabricSiny) PMID: 36073980 DOI: 10.1515/jib-2022-0031", exportable = "false", inputresource = list(list(`_classname` = "resource", `_id` = 2515172), list(`_classname` = "resource", `_id` = 2515171), list(`_classname` = "resource", `_id` = 2515170), list(`_classname` = "resource", `_id` = 2515169), list(`_classname` = "resource", `_id` = 2515168), list(`_classname` = "resource", `_id` = 2515167), list(`_classname` = "resource", `_id` = 2515166), list(`_classname` = "resource", `_id` = 2515165), list(`_classname` = "resource", `_id` = 2515164), list( `_classname` = "resource", `_id` = 2515163), list(`_classname` = "resource", `_id` = 2515162), list(`_classname` = "resource", `_id` = 2515161)), modified = "2024-06-10 10:30:00", modifiedby = "tobiasko", name = "plotMzDistribution", status = "AVAILABLE"))list(list(`_classname` = "resource", `_id` = 2515217, container = list(`_classname` = "order", `_id` = 35429), created = "2024-06-10 10:30:01", createdby = "tobiasko", filechecksum = "7bd37d0f98c87980e68fc0affc8a3a57", junk = "false", modified = "2024-06-10 10:30:01", modifiedby = "tobiasko", name = "WU304379-20240610-1030-rawDiag.pdf", relativepath = "container_35429/workunit_304379/WU304379-20240610-1030-rawDiag.pdf", size = "3907887", status = "available", storage = list(`_classname` = "storage", `_id` = 10), uri = list("https://fgcz-bfabric.uzh.ch/dmexternal/container_35429/workunit_304379/WU304379-20240610-1030-rawDiag.pdf", "scp://localhost/export/bfabric/data/b-fabric-external-repo/container_35429/workunit_304379/WU304379-20240610-1030-rawDiag.pdf"), workunit = list(`_classname` = "workunit", `_id` = 304379))) The current plot is available as workunit 304379. Rendering actionButton to link workunit 304379 in B-Fabric. plotChargeState output$employee <- renderUI({ read bfabricposturl https://fgcz-c-072.uzh.ch:5000/. Warning in .read(login = login, webservicepassword = webservicepassword, : query failed. bfabricConnectionWorking FALSE saving 'login and webservicepassword' ... plotMzDistribution output$employee <- renderUI({ read bfabricposturl https://fgcz-c-072.uzh.ch:5000/. Warning in .read(login = login, webservicepassword = webservicepassword, : query failed. bfabricConnectionWorking FALSE saving 'login and webservicepassword' ... plotChargeState output$employee <- renderUI({ read bfabricposturl https://fgcz-c-072.uzh.ch:5000/. Warning in .read(login = login, webservicepassword = webservicepassword, : query failed. bfabricConnectionWorking FALSE saving 'login and webservicepassword' ... Execution halted