Listening on http://127.0.0.1:44309 Loading required package: rawDiag Loading required package: bfabricShiny Attaching package: 'bfabricShiny' The following object is masked from 'package:base': save plotTicBasepeak output$employee <- renderUI({ read bfabricposturl https://fgcz-c-072.uzh.ch:5000/. Warning in .read(login = login, webservicepassword = webservicepassword, : query failed. bfabricConnectionWorking FALSE saving 'login and webservicepassword' ... output$employee <- renderUI({ bfabricConnectionWorking TRUE 'empdegree' found. saving 'login and webservicepassword' ... saving 'login and webservicepassword' ... saving 'login and webservicepassword' ... resourcesSelected: /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_016_S829724_EGFP-TM_3_Group_3.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_009_S829720_IRE1-DMSO_2_Group_2.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_005_S829727_EGFP-DMSO_3_Group_4.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_003_S829722_EGFP-TM_1_Group_3.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_010_S829726_EGFP-DMSO_2_Group_4.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_004_S829719_IRE1-DMSO_1_Group_2.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_006_S829721_IRE1-DMSO_3_Group_2.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_015_S829723_EGFP-TM_2_Group_3.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_012_S829716_IRE1-TM_1_Group_1.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_017_S829718_IRE1-TM_3_Group_1.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_011_S829725_EGFP-DMSO_1_Group_4.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_018_S829717_IRE1-TM_2_Group_1.raw vals$rawfile: /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_016_S829724_EGFP-TM_3_Group_3.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_009_S829720_IRE1-DMSO_2_Group_2.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_005_S829727_EGFP-DMSO_3_Group_4.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_003_S829722_EGFP-TM_1_Group_3.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_010_S829726_EGFP-DMSO_2_Group_4.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_004_S829719_IRE1-DMSO_1_Group_2.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_006_S829721_IRE1-DMSO_3_Group_2.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_015_S829723_EGFP-TM_2_Group_3.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_012_S829716_IRE1-TM_1_Group_1.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_017_S829718_IRE1-TM_3_Group_1.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_011_S829725_EGFP-DMSO_1_Group_4.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_018_S829717_IRE1-TM_2_Group_1.raw reading index for 20241113_C36862_003_S829722_EGFP-TM_1_Group_3.raw... reading index for 20241113_C36862_010_S829726_EGFP-DMSO_2_Group_4.raw... reading index for 20241113_C36862_004_S829719_IRE1-DMSO_1_Group_2.raw... reading index for 20241113_C36862_016_S829724_EGFP-TM_3_Group_3.raw... reading index for 20241113_C36862_009_S829720_IRE1-DMSO_2_Group_2.raw... reading index for 20241113_C36862_005_S829727_EGFP-DMSO_3_Group_4.raw... reading index for 20241113_C36862_006_S829721_IRE1-DMSO_3_Group_2.raw... reading index for 20241113_C36862_015_S829723_EGFP-TM_2_Group_3.raw... reading index for 20241113_C36862_012_S829716_IRE1-TM_1_Group_1.raw... reading index for 20241113_C36862_017_S829718_IRE1-TM_3_Group_1.raw... reading index for 20241113_C36862_011_S829725_EGFP-DMSO_1_Group_4.raw... reading index for 20241113_C36862_018_S829717_IRE1-TM_2_Group_1.raw... Warning: Error in : BiocParallel errors 12 remote errors, element index: 1, 2, 3, 4, 5, 6, ... 0 unevaluated and other errors first remote error: Error in .isAssemblyWorking(): 'rawrr.exe' not found. Run 'rawrr::installRawrrExe()'. For more information, type '?rawrr.exe'. 199: 198: stop 197: .bpinit 196: bplapply 194: BiocParallel::bplapply 191: 189: .func 186: contextFunc 185: env$runWith 178: ctx$run 177: self$.updateValue 175: data 168: renderPlot 166: func 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$OrbitrapFun02-plot 1: runApp resourcesSelected: /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_016_S829724_EGFP-TM_3_Group_3.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_009_S829720_IRE1-DMSO_2_Group_2.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_005_S829727_EGFP-DMSO_3_Group_4.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_003_S829722_EGFP-TM_1_Group_3.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_010_S829726_EGFP-DMSO_2_Group_4.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_004_S829719_IRE1-DMSO_1_Group_2.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_006_S829721_IRE1-DMSO_3_Group_2.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_015_S829723_EGFP-TM_2_Group_3.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_012_S829716_IRE1-TM_1_Group_1.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_017_S829718_IRE1-TM_3_Group_1.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_011_S829725_EGFP-DMSO_1_Group_4.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_018_S829717_IRE1-TM_2_Group_1.raw vals$rawfile: /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_016_S829724_EGFP-TM_3_Group_3.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_009_S829720_IRE1-DMSO_2_Group_2.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_005_S829727_EGFP-DMSO_3_Group_4.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_003_S829722_EGFP-TM_1_Group_3.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_010_S829726_EGFP-DMSO_2_Group_4.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_004_S829719_IRE1-DMSO_1_Group_2.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_006_S829721_IRE1-DMSO_3_Group_2.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_015_S829723_EGFP-TM_2_Group_3.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_012_S829716_IRE1-TM_1_Group_1.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_017_S829718_IRE1-TM_3_Group_1.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_011_S829725_EGFP-DMSO_1_Group_4.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_018_S829717_IRE1-TM_2_Group_1.raw plotTicBasepeak output$employee <- renderUI({ read bfabricposturl https://fgcz-c-072.uzh.ch:5000/. Warning in .read(login = login, webservicepassword = webservicepassword, : query failed. bfabricConnectionWorking FALSE saving 'login and webservicepassword' ... output$employee <- renderUI({ bfabricConnectionWorking TRUE 'empdegree' found. saving 'login and webservicepassword' ... saving 'login and webservicepassword' ... saving 'login and webservicepassword' ... resourcesSelected: /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_016_S829724_EGFP-TM_3_Group_3.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_009_S829720_IRE1-DMSO_2_Group_2.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_005_S829727_EGFP-DMSO_3_Group_4.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_003_S829722_EGFP-TM_1_Group_3.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_010_S829726_EGFP-DMSO_2_Group_4.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_004_S829719_IRE1-DMSO_1_Group_2.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_006_S829721_IRE1-DMSO_3_Group_2.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_015_S829723_EGFP-TM_2_Group_3.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_012_S829716_IRE1-TM_1_Group_1.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_017_S829718_IRE1-TM_3_Group_1.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_011_S829725_EGFP-DMSO_1_Group_4.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_018_S829717_IRE1-TM_2_Group_1.raw vals$rawfile: /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_016_S829724_EGFP-TM_3_Group_3.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_009_S829720_IRE1-DMSO_2_Group_2.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_005_S829727_EGFP-DMSO_3_Group_4.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_003_S829722_EGFP-TM_1_Group_3.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_010_S829726_EGFP-DMSO_2_Group_4.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_004_S829719_IRE1-DMSO_1_Group_2.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_006_S829721_IRE1-DMSO_3_Group_2.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_015_S829723_EGFP-TM_2_Group_3.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_012_S829716_IRE1-TM_1_Group_1.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_017_S829718_IRE1-TM_3_Group_1.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_011_S829725_EGFP-DMSO_1_Group_4.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_018_S829717_IRE1-TM_2_Group_1.raw reading index for 20241113_C36862_016_S829724_EGFP-TM_3_Group_3.raw... reading index for 20241113_C36862_009_S829720_IRE1-DMSO_2_Group_2.raw... reading index for 20241113_C36862_005_S829727_EGFP-DMSO_3_Group_4.raw... reading index for 20241113_C36862_003_S829722_EGFP-TM_1_Group_3.raw... reading index for 20241113_C36862_010_S829726_EGFP-DMSO_2_Group_4.raw... reading index for 20241113_C36862_004_S829719_IRE1-DMSO_1_Group_2.raw... reading index for 20241113_C36862_006_S829721_IRE1-DMSO_3_Group_2.raw... reading index for 20241113_C36862_015_S829723_EGFP-TM_2_Group_3.raw... reading index for 20241113_C36862_017_S829718_IRE1-TM_3_Group_1.raw... reading index for 20241113_C36862_012_S829716_IRE1-TM_1_Group_1.raw... reading index for 20241113_C36862_011_S829725_EGFP-DMSO_1_Group_4.raw... reading index for 20241113_C36862_018_S829717_IRE1-TM_2_Group_1.raw... Warning: Error in : BiocParallel errors 12 remote errors, element index: 1, 2, 3, 4, 5, 6, ... 0 unevaluated and other errors first remote error: Error in .isAssemblyWorking(): 'rawrr.exe' not found. Run 'rawrr::installRawrrExe()'. For more information, type '?rawrr.exe'. 199: 198: stop 197: .bpinit 196: bplapply 194: BiocParallel::bplapply 191: 189: .func 186: contextFunc 185: env$runWith 178: ctx$run 177: self$.updateValue 175: data 168: renderPlot 166: func 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$OrbitrapFun02-plot 1: runApp plotLockMassCorrection resourcesSelected: /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_016_S829724_EGFP-TM_3_Group_3.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_009_S829720_IRE1-DMSO_2_Group_2.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_005_S829727_EGFP-DMSO_3_Group_4.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_003_S829722_EGFP-TM_1_Group_3.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_010_S829726_EGFP-DMSO_2_Group_4.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_004_S829719_IRE1-DMSO_1_Group_2.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_006_S829721_IRE1-DMSO_3_Group_2.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_015_S829723_EGFP-TM_2_Group_3.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_012_S829716_IRE1-TM_1_Group_1.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_017_S829718_IRE1-TM_3_Group_1.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_011_S829725_EGFP-DMSO_1_Group_4.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_018_S829717_IRE1-TM_2_Group_1.raw vals$rawfile: /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_016_S829724_EGFP-TM_3_Group_3.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_009_S829720_IRE1-DMSO_2_Group_2.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_005_S829727_EGFP-DMSO_3_Group_4.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_003_S829722_EGFP-TM_1_Group_3.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_010_S829726_EGFP-DMSO_2_Group_4.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_004_S829719_IRE1-DMSO_1_Group_2.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_006_S829721_IRE1-DMSO_3_Group_2.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_015_S829723_EGFP-TM_2_Group_3.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_012_S829716_IRE1-TM_1_Group_1.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_017_S829718_IRE1-TM_3_Group_1.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_011_S829725_EGFP-DMSO_1_Group_4.raw, /srv/www/htdocs//p36862/Proteomics/LUMOS_2/analytic_20241113/20241113_C36862_018_S829717_IRE1-TM_2_Group_1.raw plotInjectionTime plotTicBasepeak resourcesSelected: /srv/www/htdocs//p36834/Proteomics/EXPLORIS_2/fottner_20241108/20241108_002_S828351_diUb-SUMO_withUV_Group_1.raw, /srv/www/htdocs//p36834/Proteomics/EXPLORIS_2/fottner_20241108/20241108_004_S828352_diUb-SUMO_withoutUV_Group_2.raw vals$rawfile: /srv/www/htdocs//p36834/Proteomics/EXPLORIS_2/fottner_20241108/20241108_002_S828351_diUb-SUMO_withUV_Group_1.raw, /srv/www/htdocs//p36834/Proteomics/EXPLORIS_2/fottner_20241108/20241108_004_S828352_diUb-SUMO_withoutUV_Group_2.raw reading index for 20241108_002_S828351_diUb-SUMO_withUV_Group_1.raw... reading index for 20241108_004_S828352_diUb-SUMO_withoutUV_Group_2.raw... Warning: Error in : BiocParallel errors 2 remote errors, element index: 1, 2 0 unevaluated and other errors first remote error: Error in .isAssemblyWorking(): 'rawrr.exe' not found. Run 'rawrr::installRawrrExe()'. For more information, type '?rawrr.exe'. 199: 198: stop 197: .bpinit 196: bplapply 194: BiocParallel::bplapply 191: 189: .func 186: contextFunc 185: env$runWith 178: ctx$run 177: self$.updateValue 175: data 168: renderPlot 166: func 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$OrbitrapFun02-plot 1: runApp Execution halted