Listening on http://127.0.0.1:34517
Loading required package: rawDiag
Loading required package: bfabricShiny

Attaching package: 'bfabricShiny'

The following object is masked from 'package:base':

    save

plotChargeState
output$employee <- renderUI({
read bfabricposturl https://fgcz-c-072.uzh.ch:5000/.
Warning in .read(login = login, webservicepassword = webservicepassword,  :
  query failed.
bfabricConnectionWorking FALSE
saving 'login and webservicepassword' ...
output$employee <- renderUI({
bfabricConnectionWorking TRUE
'empdegree' found.
saving 'login and webservicepassword' ...
saving 'login and webservicepassword' ...
saving 'login and webservicepassword' ...
resourcesSelected: /srv/www/htdocs//p37038/Proteomics/LUMOS_2/analytic_20241126/20241126_C37038_018_S844315_BH-06AUG24-02-2_Group_4_DDA.raw, /srv/www/htdocs//p37038/Proteomics/LUMOS_2/analytic_20241126/20241126_C37038_023_S844308_ZE-14MAY24-02-1_Group_1_DDA.raw, /srv/www/htdocs//p37038/Proteomics/LUMOS_2/analytic_20241126/20241126_C37038_017_S844312_BE-06AUG24-02-1_Group_3_DDA.raw, /srv/www/htdocs//p37038/Proteomics/LUMOS_2/analytic_20241126/20241126_C37038_016_S844309_ZE-14MAY24-02-2_Group_1_DDA.raw, /srv/www/htdocs//p37038/Proteomics/LUMOS_2/analytic_20241126/20241126_C37038_020_S844311_ZH-14MAY24-02-2_Group_2_DDA.raw, /srv/www/htdocs//p37038/Proteomics/LUMOS_2/analytic_20241126/20241126_C37038_021_S844313_BE-06AUG24-02-2_Group_3_DDA.raw, /srv/www/htdocs//p37038/Proteomics/LUMOS_2/analytic_20241126/20241126_C37038_022_S844310_ZH-14MAY24-02-1_Group_2_DDA.raw, /srv/www/htdocs//p37038/Proteomics/LUMOS_2/analytic_20241126/20241126_C37038_015_S844314_BH-06AUG24-02-1_Group_4_DDA.raw
vals$rawfile: /srv/www/htdocs//p37038/Proteomics/LUMOS_2/analytic_20241126/20241126_C37038_018_S844315_BH-06AUG24-02-2_Group_4_DDA.raw,
	/srv/www/htdocs//p37038/Proteomics/LUMOS_2/analytic_20241126/20241126_C37038_023_S844308_ZE-14MAY24-02-1_Group_1_DDA.raw,
	/srv/www/htdocs//p37038/Proteomics/LUMOS_2/analytic_20241126/20241126_C37038_017_S844312_BE-06AUG24-02-1_Group_3_DDA.raw,
	/srv/www/htdocs//p37038/Proteomics/LUMOS_2/analytic_20241126/20241126_C37038_016_S844309_ZE-14MAY24-02-2_Group_1_DDA.raw,
	/srv/www/htdocs//p37038/Proteomics/LUMOS_2/analytic_20241126/20241126_C37038_020_S844311_ZH-14MAY24-02-2_Group_2_DDA.raw,
	/srv/www/htdocs//p37038/Proteomics/LUMOS_2/analytic_20241126/20241126_C37038_021_S844313_BE-06AUG24-02-2_Group_3_DDA.raw,
	/srv/www/htdocs//p37038/Proteomics/LUMOS_2/analytic_20241126/20241126_C37038_022_S844310_ZH-14MAY24-02-1_Group_2_DDA.raw,
	/srv/www/htdocs//p37038/Proteomics/LUMOS_2/analytic_20241126/20241126_C37038_015_S844314_BH-06AUG24-02-1_Group_4_DDA.raw
reading index for 20241126_C37038_018_S844315_BH-06AUG24-02-2_Group_4_DDA.raw...

reading index for 20241126_C37038_023_S844308_ZE-14MAY24-02-1_Group_1_DDA.raw...

reading index for 20241126_C37038_017_S844312_BE-06AUG24-02-1_Group_3_DDA.raw...

reading index for 20241126_C37038_016_S844309_ZE-14MAY24-02-2_Group_1_DDA.raw...

reading index for 20241126_C37038_020_S844311_ZH-14MAY24-02-2_Group_2_DDA.raw...

reading index for 20241126_C37038_021_S844313_BE-06AUG24-02-2_Group_3_DDA.raw...

reading index for 20241126_C37038_022_S844310_ZH-14MAY24-02-1_Group_2_DDA.raw...

reading index for 20241126_C37038_015_S844314_BH-06AUG24-02-1_Group_4_DDA.raw...

Warning: Error in : BiocParallel errors
  8 remote errors, element index: 1, 2, 3, 4, 5, 6, ...
  0 unevaluated and other errors
  first remote error:
Error in .isAssemblyWorking(): 'rawrr.exe' not found.
Run 'rawrr::installRawrrExe()'. For more information, type '?rawrr.exe'.

  199: <Anonymous>
  198: stop
  197: .bpinit
  196: bplapply
  194: BiocParallel::bplapply
  191: <reactive>
  189: .func
  186: contextFunc
  185: env$runWith
  178: ctx$run
  177: self$.updateValue
  175: data
  168: renderPlot
  166: func
  126: drawPlot
  112: <reactive:plotObj>
   96: drawReactive
   83: renderFunc
   82: output$OrbitrapFun02-plot
    1: runApp
plotTicBasepeak
Warning: Error in : BiocParallel errors
  8 remote errors, element index: 1, 2, 3, 4, 5, 6, ...
  0 unevaluated and other errors
  first remote error:
Error in .isAssemblyWorking(): 'rawrr.exe' not found.
Run 'rawrr::installRawrrExe()'. For more information, type '?rawrr.exe'.

  177: <Anonymous>
  176: stop
  175: data
  168: renderPlot
  166: func
  126: drawPlot
  112: <reactive:plotObj>
   96: drawReactive
   83: renderFunc
   82: output$OrbitrapFun02-plot
    1: runApp
Warning: Error in : BiocParallel errors
  8 remote errors, element index: 1, 2, 3, 4, 5, 6, ...
  0 unevaluated and other errors
  first remote error:
Error in .isAssemblyWorking(): 'rawrr.exe' not found.
Run 'rawrr::installRawrrExe()'. For more information, type '?rawrr.exe'.

  177: <Anonymous>
  176: stop
  175: data
  168: renderPlot
  166: func
  126: drawPlot
  112: <reactive:plotObj>
   96: drawReactive
   83: renderFunc
   82: output$OrbitrapFun02-plot
    1: runApp
Warning: Error in : BiocParallel errors
  8 remote errors, element index: 1, 2, 3, 4, 5, 6, ...
  0 unevaluated and other errors
  first remote error:
Error in .isAssemblyWorking(): 'rawrr.exe' not found.
Run 'rawrr::installRawrrExe()'. For more information, type '?rawrr.exe'.

  1: runApp
plotChargeState
output$employee <- renderUI({
read bfabricposturl https://fgcz-c-072.uzh.ch:5000/.
Warning in .read(login = login, webservicepassword = webservicepassword,  :
  query failed.
bfabricConnectionWorking FALSE
saving 'login and webservicepassword' ...
output$employee <- renderUI({
bfabricConnectionWorking TRUE
'empdegree' found.

Execution halted