Listening on http://127.0.0.1:41105
Loading required package: bfabricShiny

Attaching package: 'bfabricShiny'

The following object is masked from 'package:base':

    save

Loading required package: rawrr
Warning: Error in path.expand: invalid 'path' argument
  101: path.expand
  100: normalizePath
   99: .checkRawFile
   98: readFileHeader
   97: renderTable
   96: func
   83: renderFunc
   82: output$OrbitrapFun02-fileHeader
    1: runApp
Read 22032 items
output$employee <- renderUI({
read bfabricposturl https://fgcz-c-072.uzh.ch:5000/.
Warning in .read(login = login, webservicepassword = webservicepassword,  :
  query failed.
bfabricConnectionWorking FALSE
saving 'login and webservicepassword' ...
output$employee <- renderUI({
bfabricConnectionWorking TRUE
'empdegree' found.
saving 'login and webservicepassword' ...
saving 'login and webservicepassword' ...
saving 'login and webservicepassword' ...
resourcesSelected: /srv/www/htdocs//p26109/Proteomics/LUMOS_2/ackle_20230531_operator_training/20230531_013_autoQC4L.raw, /srv/www/htdocs//p26109/Proteomics/LUMOS_2/ackle_20230531_operator_training/20230531_012_autoQC01.raw, /srv/www/htdocs//p26109/Proteomics/LUMOS_2/ackle_20230531_operator_training/20230531_008_S427185_Glu1_Group_1.raw, /srv/www/htdocs//p26109/Proteomics/LUMOS_2/ackle_20230531_operator_training/20230531_006_autoQC01.raw, /srv/www/htdocs//p26109/Proteomics/LUMOS_2/ackle_20230531_operator_training/20230531_001_autoQC01.raw
vals$rawfile: /srv/www/htdocs//p26109/Proteomics/LUMOS_2/ackle_20230531_operator_training/20230531_013_autoQC4L.raw,
	/srv/www/htdocs//p26109/Proteomics/LUMOS_2/ackle_20230531_operator_training/20230531_012_autoQC01.raw,
	/srv/www/htdocs//p26109/Proteomics/LUMOS_2/ackle_20230531_operator_training/20230531_008_S427185_Glu1_Group_1.raw,
	/srv/www/htdocs//p26109/Proteomics/LUMOS_2/ackle_20230531_operator_training/20230531_006_autoQC01.raw,
	/srv/www/htdocs//p26109/Proteomics/LUMOS_2/ackle_20230531_operator_training/20230531_001_autoQC01.raw

fn has changed to /srv/www/htdocs//p26109/Proteomics/LUMOS_2/ackle_20230531_operator_training/20230531_013_autoQC4L.raw
Reading raw file: /srv/www/htdocs//p26109/Proteomics/LUMOS_2/ackle_20230531_operator_training/20230531_013_autoQC4L.raw
Plotting chromatograms ...
Read 22032 items
resourcesSelected: /srv/www/htdocs//p26109/Proteomics/LUMOS_2/ackle_20230531_operator_training/20230531_012_autoQC01.raw, /srv/www/htdocs//p26109/Proteomics/LUMOS_2/ackle_20230531_operator_training/20230531_008_S427185_Glu1_Group_1.raw, /srv/www/htdocs//p26109/Proteomics/LUMOS_2/ackle_20230531_operator_training/20230531_006_autoQC01.raw, /srv/www/htdocs//p26109/Proteomics/LUMOS_2/ackle_20230531_operator_training/20230531_001_autoQC01.raw
vals$rawfile: /srv/www/htdocs//p26109/Proteomics/LUMOS_2/ackle_20230531_operator_training/20230531_012_autoQC01.raw,
	/srv/www/htdocs//p26109/Proteomics/LUMOS_2/ackle_20230531_operator_training/20230531_008_S427185_Glu1_Group_1.raw,
	/srv/www/htdocs//p26109/Proteomics/LUMOS_2/ackle_20230531_operator_training/20230531_006_autoQC01.raw,
	/srv/www/htdocs//p26109/Proteomics/LUMOS_2/ackle_20230531_operator_training/20230531_001_autoQC01.raw

fn has changed to /srv/www/htdocs//p26109/Proteomics/LUMOS_2/ackle_20230531_operator_training/20230531_012_autoQC01.raw
Reading raw file: /srv/www/htdocs//p26109/Proteomics/LUMOS_2/ackle_20230531_operator_training/20230531_012_autoQC01.raw
Plotting chromatograms ...
Read 22032 items
Plotting chromatograms ...
Plotting chromatograms ...
Plotting chromatograms ...
resourcesSelected: /srv/www/htdocs//p26109/Proteomics/FUSION_2/tomasfranziska_20231130_ot/20231130_013_autoQC01.raw, /srv/www/htdocs//p26109/Proteomics/FUSION_2/tomasfranziska_20231130_ot/20231130_001c_autoQC01.raw, /srv/www/htdocs//p26109/Proteomics/FUSION_2/tomasfranziska_20231130_ot/20231130_014_autoQC03DDA.raw, /srv/www/htdocs//p26109/Proteomics/FUSION_2/tomasfranziska_20231130_ot/20231130_007_autoQC01.raw, /srv/www/htdocs//p26109/Proteomics/FUSION_2/algome_20231012_training_module3_DIA/20231012_018_autoQC01.raw
vals$rawfile: /srv/www/htdocs//p26109/Proteomics/FUSION_2/tomasfranziska_20231130_ot/20231130_013_autoQC01.raw,
	/srv/www/htdocs//p26109/Proteomics/FUSION_2/tomasfranziska_20231130_ot/20231130_001c_autoQC01.raw,
	/srv/www/htdocs//p26109/Proteomics/FUSION_2/tomasfranziska_20231130_ot/20231130_014_autoQC03DDA.raw,
	/srv/www/htdocs//p26109/Proteomics/FUSION_2/tomasfranziska_20231130_ot/20231130_007_autoQC01.raw,
	/srv/www/htdocs//p26109/Proteomics/FUSION_2/algome_20231012_training_module3_DIA/20231012_018_autoQC01.raw

fn has changed to /srv/www/htdocs//p26109/Proteomics/FUSION_2/tomasfranziska_20231130_ot/20231130_013_autoQC01.raw
Read 22032 items
Reading raw file: /srv/www/htdocs//p26109/Proteomics/FUSION_2/tomasfranziska_20231130_ot/20231130_013_autoQC01.raw
Plotting chromatograms ...
Plotting chromatograms ...
Plotting chromatograms ...
resourcesSelected: /srv/www/htdocs//p26109/Proteomics/FUSION_2/tomasfranziska_20231130_ot/20231130_007_autoQC01.raw
vals$rawfile: /srv/www/htdocs//p26109/Proteomics/FUSION_2/tomasfranziska_20231130_ot/20231130_007_autoQC01.raw

fn has changed to /srv/www/htdocs//p26109/Proteomics/FUSION_2/tomasfranziska_20231130_ot/20231130_007_autoQC01.raw
Read 22032 items
Reading raw file: /srv/www/htdocs//p26109/Proteomics/FUSION_2/tomasfranziska_20231130_ot/20231130_007_autoQC01.raw
Plotting chromatograms ...
Read 22032 items
Reading raw file: /srv/www/htdocs//p26109/Proteomics/FUSION_2/tomasfranziska_20231130_ot/20231130_007_autoQC01.raw
Plotting chromatograms ...
resourcesSelected: /srv/www/htdocs//p26109/Proteomics/FUSION_2/prflury_20221123/20221123_012_autoQC01.raw, /srv/www/htdocs//p26109/Proteomics/FUSION_2/tomasfranziska_20231130_ot/20231130_007_autoQC01.raw
vals$rawfile: /srv/www/htdocs//p26109/Proteomics/FUSION_2/prflury_20221123/20221123_012_autoQC01.raw,
	/srv/www/htdocs//p26109/Proteomics/FUSION_2/tomasfranziska_20231130_ot/20231130_007_autoQC01.raw

fn has changed to /srv/www/htdocs//p26109/Proteomics/FUSION_2/prflury_20221123/20221123_012_autoQC01.raw
Read 22032 items
Reading raw file: /srv/www/htdocs//p26109/Proteomics/FUSION_2/prflury_20221123/20221123_012_autoQC01.raw
Plotting chromatograms ...


Execution halted