Listening on http://127.0.0.1:38707
Loading required package: bfabricShiny

Attaching package: 'bfabricShiny'

The following object is masked from 'package:base':

    save

saving 'login and webservicepassword' ...
read bfabricposturl https://fgcz-c-072.uzh.ch:5000/.
Request started from user mderrico

saving 'login and webservicepassword' ...
read bfabricposturl https://fgcz-c-072.uzh.ch:5000/.
Request started from user mderrico

saving 'login and webservicepassword' ...
Warning in shinyStore::updateStore(session, "login", isolate(input$login),  :
  Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user.
Warning in shinyStore::updateStore(session, "webservicepassword", isolate(input$webservicepassword),  :
  Encryption requested, but the user is not authenticated. The encryption will be MUCH weaker without binding to a logged-in user.
read bfabricposturl https://fgcz-c-072.uzh.ch:5000/.
Request started from user mderrico
test

saving 'login and webservicepassword' ...
read bfabricposturl https://fgcz-c-072.uzh.ch:5000/.
Request started from user mderrico
test
list(list(`_classname` = "plate", `_id` = 2200, created = "2023-03-27 14:57:35", createdby = "othman", deletable = "false", layout = "96-well", modified = "2023-05-15 12:55:54", modifiedby = "othman", name = "QGen_Metabolomics_Test", sample = list(list(`_classname` = "sample", `_gridposition` = "A12", `_id` = 488895, `_position` = "12"), list(`_classname` = "sample", `_gridposition` = "A11", `_id` = 488894, `_position` = "11"), list(`_classname` = "sample", `_gridposition` = "A10", `_id` = 488893, 
    `_position` = "10"), list(`_classname` = "sample", `_gridposition` = "A9", `_id` = 488892, `_position` = "9"), list(`_classname` = "sample", `_gridposition` = "A8", `_id` = 488891, `_position` = "8"), list(`_classname` = "sample", `_gridposition` = "A7", `_id` = 488890, `_position` = "7"), list(`_classname` = "sample", `_gridposition` = "A6", `_id` = 488889, `_position` = "6"), list(`_classname` = "sample", `_gridposition` = "A5", `_id` = 488888, `_position` = "5"), list(`_classname` = "sample", 
    `_gridposition` = "A4", `_id` = 488887, `_position` = "4"), list(`_classname` = "sample", `_gridposition` = "A3", `_id` = 488886, `_position` = "3"), list(`_classname` = "sample", `_gridposition` = "A2", `_id` = 488885, `_position` = "2"), list(`_classname` = "sample", `_gridposition` = "A1", `_id` = 488884, `_position` = "1"), list(`_classname` = "sample", `_gridposition` = "H11", `_id` = 509294, `_position` = "95"), list(`_classname` = "sample", `_gridposition` = "H12", `_id` = 509295, `_position` = "96"), 
    list(`_classname` = "sample", `_gridposition` = "H9", `_id` = 509302, `_position` = "93"), list(`_classname` = "sample", `_gridposition` = "H4", `_id` = 509303, `_position` = "88"), list(`_classname` = "sample", `_gridposition` = "H7", `_id` = 509306, `_position` = "91"), list(`_classname` = "sample", `_gridposition` = "H6", `_id` = 509305, `_position` = "90"), list(`_classname` = "sample", `_gridposition` = "H5", `_id` = 509304, `_position` = "89"), list(`_classname` = "sample", `_gridposition` = "H8", 
        `_id` = 509307, `_position` = "92"), list(`_classname` = "sample", `_gridposition` = "H10", `_id` = 509313, `_position` = "94"), list(`_classname` = "sample", `_gridposition` = "H3", `_id` = 509312, `_position` = "87")), status = "ready", statusmodified = "2023-05-15T12:55:54.871", statusmodifiedby = list(`_classname` = "user", `_id` = 8761), supervisor = list(`_classname` = "user", `_id` = 8761), type = "Metabolomomics", updatable = "true"))

saving 'login and webservicepassword' ...
read bfabricposturl https://fgcz-c-072.uzh.ch:5000/.
Request started from user mderrico
test
list(list(`_classname` = "plate", `_id` = 2200, created = "2023-03-27 14:57:35", createdby = "othman", deletable = "false", layout = "96-well", modified = "2023-05-15 12:55:54", modifiedby = "othman", name = "QGen_Metabolomics_Test", sample = list(list(`_classname` = "sample", `_gridposition` = "A12", `_id` = 488895, `_position` = "12"), list(`_classname` = "sample", `_gridposition` = "A11", `_id` = 488894, `_position` = "11"), list(`_classname` = "sample", `_gridposition` = "A10", `_id` = 488893, 
    `_position` = "10"), list(`_classname` = "sample", `_gridposition` = "A9", `_id` = 488892, `_position` = "9"), list(`_classname` = "sample", `_gridposition` = "A8", `_id` = 488891, `_position` = "8"), list(`_classname` = "sample", `_gridposition` = "A7", `_id` = 488890, `_position` = "7"), list(`_classname` = "sample", `_gridposition` = "A6", `_id` = 488889, `_position` = "6"), list(`_classname` = "sample", `_gridposition` = "A5", `_id` = 488888, `_position` = "5"), list(`_classname` = "sample", 
    `_gridposition` = "A4", `_id` = 488887, `_position` = "4"), list(`_classname` = "sample", `_gridposition` = "A3", `_id` = 488886, `_position` = "3"), list(`_classname` = "sample", `_gridposition` = "A2", `_id` = 488885, `_position` = "2"), list(`_classname` = "sample", `_gridposition` = "A1", `_id` = 488884, `_position` = "1"), list(`_classname` = "sample", `_gridposition` = "H11", `_id` = 509294, `_position` = "95"), list(`_classname` = "sample", `_gridposition` = "H12", `_id` = 509295, `_position` = "96"), 
    list(`_classname` = "sample", `_gridposition` = "H9", `_id` = 509302, `_position` = "93"), list(`_classname` = "sample", `_gridposition` = "H4", `_id` = 509303, `_position` = "88"), list(`_classname` = "sample", `_gridposition` = "H7", `_id` = 509306, `_position` = "91"), list(`_classname` = "sample", `_gridposition` = "H6", `_id` = 509305, `_position` = "90"), list(`_classname` = "sample", `_gridposition` = "H5", `_id` = 509304, `_position` = "89"), list(`_classname` = "sample", `_gridposition` = "H8", 
        `_id` = 509307, `_position` = "92"), list(`_classname` = "sample", `_gridposition` = "H10", `_id` = 509313, `_position` = "94"), list(`_classname` = "sample", `_gridposition` = "H3", `_id` = 509312, `_position` = "87")), status = "ready", statusmodified = "2023-05-15T12:55:54.871", statusmodifiedby = list(`_classname` = "user", `_id` = 8761), supervisor = list(`_classname` = "user", `_id` = 8761), type = "Metabolomomics", updatable = "true"))
QGen_Metabolomics_Test
sampleA1248889512
sampleA1148889411
sampleA1048889310
sampleA94888929
sampleA84888918
sampleA74888907
sampleA64888896
sampleA54888885
sampleA44888874
sampleA34888863
sampleA24888852
sampleA14888841
sampleH1150929495
sampleH1250929596
sampleH950930293
sampleH450930388
sampleH750930691
sampleH650930590
sampleH550930489
sampleH850930792
sampleH1050931394
sampleH350931287
Warning: Error in <Anonymous>: arguments imply differing number of rows: 22, 0
  87: stop
  86: <Anonymous>
  84: as.data.frame.list
  82: data.frame
  81: output$outputKable [/home/mderrico/_checkouts/bfabricShiny/inst/shiny/extractPlateId/server.R#111]
   1: runApp
saving 'login and webservicepassword' ...
read bfabricposturl https://fgcz-c-072.uzh.ch:5000/.
Request started from user mderrico
test
list(list(`_classname` = "plate", `_id` = 2200, created = "2023-03-27 14:57:35", createdby = "othman", deletable = "false", layout = "96-well", modified = "2023-05-15 12:55:54", modifiedby = "othman", name = "QGen_Metabolomics_Test", sample = list(list(`_classname` = "sample", `_gridposition` = "A12", `_id` = 488895, `_position` = "12"), list(`_classname` = "sample", `_gridposition` = "A11", `_id` = 488894, `_position` = "11"), list(`_classname` = "sample", `_gridposition` = "A10", `_id` = 488893, 
    `_position` = "10"), list(`_classname` = "sample", `_gridposition` = "A9", `_id` = 488892, `_position` = "9"), list(`_classname` = "sample", `_gridposition` = "A8", `_id` = 488891, `_position` = "8"), list(`_classname` = "sample", `_gridposition` = "A7", `_id` = 488890, `_position` = "7"), list(`_classname` = "sample", `_gridposition` = "A6", `_id` = 488889, `_position` = "6"), list(`_classname` = "sample", `_gridposition` = "A5", `_id` = 488888, `_position` = "5"), list(`_classname` = "sample", 
    `_gridposition` = "A4", `_id` = 488887, `_position` = "4"), list(`_classname` = "sample", `_gridposition` = "A3", `_id` = 488886, `_position` = "3"), list(`_classname` = "sample", `_gridposition` = "A2", `_id` = 488885, `_position` = "2"), list(`_classname` = "sample", `_gridposition` = "A1", `_id` = 488884, `_position` = "1"), list(`_classname` = "sample", `_gridposition` = "H11", `_id` = 509294, `_position` = "95"), list(`_classname` = "sample", `_gridposition` = "H12", `_id` = 509295, `_position` = "96"), 
    list(`_classname` = "sample", `_gridposition` = "H9", `_id` = 509302, `_position` = "93"), list(`_classname` = "sample", `_gridposition` = "H4", `_id` = 509303, `_position` = "88"), list(`_classname` = "sample", `_gridposition` = "H7", `_id` = 509306, `_position` = "91"), list(`_classname` = "sample", `_gridposition` = "H6", `_id` = 509305, `_position` = "90"), list(`_classname` = "sample", `_gridposition` = "H5", `_id` = 509304, `_position` = "89"), list(`_classname` = "sample", `_gridposition` = "H8", 
        `_id` = 509307, `_position` = "92"), list(`_classname` = "sample", `_gridposition` = "H10", `_id` = 509313, `_position` = "94"), list(`_classname` = "sample", `_gridposition` = "H3", `_id` = 509312, `_position` = "87")), status = "ready", statusmodified = "2023-05-15T12:55:54.871", statusmodifiedby = list(`_classname` = "user", `_id` = 8761), supervisor = list(`_classname` = "user", `_id` = 8761), type = "Metabolomomics", updatable = "true"))
QGen_Metabolomics_Test
sampleA1248889512
sampleA1148889411
sampleA1048889310
sampleA94888929
sampleA84888918
sampleA74888907
sampleA64888896
sampleA54888885
sampleA44888874
sampleA34888863
sampleA24888852
sampleA14888841
sampleH1150929495
sampleH1250929596
sampleH950930293
sampleH450930388
sampleH750930691
sampleH650930590
sampleH550930489
sampleH850930792
sampleH1050931394
sampleH350931287
488895488894488893488892488891488890488889488888488887488886488885488884509294509295509302509303509306509305509304509307509313509312
Warning: Error in <Anonymous>: arguments imply differing number of rows: 22, 0
  87: stop
  86: <Anonymous>
  84: as.data.frame.list
  82: data.frame
  81: output$outputKable [/home/mderrico/_checkouts/bfabricShiny/inst/shiny/extractPlateId/server.R#112]
   1: runApp
saving 'login and webservicepassword' ...
read bfabricposturl https://fgcz-c-072.uzh.ch:5000/.
Request started from user mderrico
test
list(list(`_classname` = "plate", `_id` = 2200, created = "2023-03-27 14:57:35", createdby = "othman", deletable = "false", layout = "96-well", modified = "2023-05-15 12:55:54", modifiedby = "othman", name = "QGen_Metabolomics_Test", sample = list(list(`_classname` = "sample", `_gridposition` = "A12", `_id` = 488895, `_position` = "12"), list(`_classname` = "sample", `_gridposition` = "A11", `_id` = 488894, `_position` = "11"), list(`_classname` = "sample", `_gridposition` = "A10", `_id` = 488893, 
    `_position` = "10"), list(`_classname` = "sample", `_gridposition` = "A9", `_id` = 488892, `_position` = "9"), list(`_classname` = "sample", `_gridposition` = "A8", `_id` = 488891, `_position` = "8"), list(`_classname` = "sample", `_gridposition` = "A7", `_id` = 488890, `_position` = "7"), list(`_classname` = "sample", `_gridposition` = "A6", `_id` = 488889, `_position` = "6"), list(`_classname` = "sample", `_gridposition` = "A5", `_id` = 488888, `_position` = "5"), list(`_classname` = "sample", 
    `_gridposition` = "A4", `_id` = 488887, `_position` = "4"), list(`_classname` = "sample", `_gridposition` = "A3", `_id` = 488886, `_position` = "3"), list(`_classname` = "sample", `_gridposition` = "A2", `_id` = 488885, `_position` = "2"), list(`_classname` = "sample", `_gridposition` = "A1", `_id` = 488884, `_position` = "1"), list(`_classname` = "sample", `_gridposition` = "H11", `_id` = 509294, `_position` = "95"), list(`_classname` = "sample", `_gridposition` = "H12", `_id` = 509295, `_position` = "96"), 
    list(`_classname` = "sample", `_gridposition` = "H9", `_id` = 509302, `_position` = "93"), list(`_classname` = "sample", `_gridposition` = "H4", `_id` = 509303, `_position` = "88"), list(`_classname` = "sample", `_gridposition` = "H7", `_id` = 509306, `_position` = "91"), list(`_classname` = "sample", `_gridposition` = "H6", `_id` = 509305, `_position` = "90"), list(`_classname` = "sample", `_gridposition` = "H5", `_id` = 509304, `_position` = "89"), list(`_classname` = "sample", `_gridposition` = "H8", 
        `_id` = 509307, `_position` = "92"), list(`_classname` = "sample", `_gridposition` = "H10", `_id` = 509313, `_position` = "94"), list(`_classname` = "sample", `_gridposition` = "H3", `_id` = 509312, `_position` = "87")), status = "ready", statusmodified = "2023-05-15T12:55:54.871", statusmodifiedby = list(`_classname` = "user", `_id` = 8761), supervisor = list(`_classname` = "user", `_id` = 8761), type = "Metabolomomics", updatable = "true"))
488895
sampleA1248889512
sampleA1148889411
sampleA1048889310
sampleA94888929
sampleA84888918
sampleA74888907
sampleA64888896
sampleA54888885
sampleA44888874
sampleA34888863
sampleA24888852
sampleA14888841
sampleH1150929495
sampleH1250929596
sampleH950930293
sampleH450930388
sampleH750930691
sampleH650930590
sampleH550930489
sampleH850930792
sampleH1050931394
sampleH350931287
488895488894488893488892488891488890488889488888488887488886488885488884509294509295509302509303509306509305509304509307509313509312
Warning: Error in <Anonymous>: arguments imply differing number of rows: 22, 0
  87: stop
  86: <Anonymous>
  84: as.data.frame.list
  82: data.frame
  81: output$outputKable [/home/mderrico/_checkouts/bfabricShiny/inst/shiny/extractPlateId/server.R#112]
   1: runApp
saving 'login and webservicepassword' ...
read bfabricposturl https://fgcz-c-072.uzh.ch:5000/.
Request started from user mderrico
test
list
488895
sampleA1248889512
sampleA1148889411
sampleA1048889310
sampleA94888929
sampleA84888918
sampleA74888907
sampleA64888896
sampleA54888885
sampleA44888874
sampleA34888863
sampleA24888852
sampleA14888841
sampleH1150929495
sampleH1250929596
sampleH950930293
sampleH450930388
sampleH750930691
sampleH650930590
sampleH550930489
sampleH850930792
sampleH1050931394
sampleH350931287
488895488894488893488892488891488890488889488888488887488886488885488884509294509295509302509303509306509305509304509307509313509312
Warning: Error in <Anonymous>: arguments imply differing number of rows: 22, 0
  87: stop
  86: <Anonymous>
  84: as.data.frame.list
  82: data.frame
  81: output$outputKable [/home/mderrico/_checkouts/bfabricShiny/inst/shiny/extractPlateId/server.R#112]
   1: runApp
saving 'login and webservicepassword' ...
read bfabricposturl https://fgcz-c-072.uzh.ch:5000/.
Request started from user mderrico
test
22
488894
sampleA1248889512
sampleA1148889411
sampleA1048889310
sampleA94888929
sampleA84888918
sampleA74888907
sampleA64888896
sampleA54888885
sampleA44888874
sampleA34888863
sampleA24888852
sampleA14888841
sampleH1150929495
sampleH1250929596
sampleH950930293
sampleH450930388
sampleH750930691
sampleH650930590
sampleH550930489
sampleH850930792
sampleH1050931394
sampleH350931287
488895488894488893488892488891488890488889488888488887488886488885488884509294509295509302509303509306509305509304509307509313509312
Warning: Error in <Anonymous>: arguments imply differing number of rows: 22, 0
  87: stop
  86: <Anonymous>
  84: as.data.frame.list
  82: data.frame
  81: output$outputKable [/home/mderrico/_checkouts/bfabricShiny/inst/shiny/extractPlateId/server.R#112]
   1: runApp
saving 'login and webservicepassword' ...
read bfabricposturl https://fgcz-c-072.uzh.ch:5000/.
Request started from user mderrico
test
22
488894
488895488894488893488892488891488890488889488888488887488886488885488884509294509295509302509303509306509305509304509307509313509312
Warning: Error in <Anonymous>: arguments imply differing number of rows: 22, 0
  87: stop
  86: <Anonymous>
  84: as.data.frame.list
  82: data.frame
  81: output$outputKable [/home/mderrico/_checkouts/bfabricShiny/inst/shiny/extractPlateId/server.R#115]
   1: runApp
saving 'login and webservicepassword' ...
read bfabricposturl https://fgcz-c-072.uzh.ch:5000/.
Request started from user mderrico
test
22
488894
488895488894488893488892488891488890488889488888488887488886488885488884509294509295509302509303509306509305509304509307509313509312
Warning: Error in <Anonymous>: arguments imply differing number of rows: 22, 0
  87: stop
  86: <Anonymous>
  84: as.data.frame.list
  82: data.frame
  81: output$outputKable [/home/mderrico/_checkouts/bfabricShiny/inst/shiny/extractPlateId/server.R#117]
   1: runApp
saving 'login and webservicepassword' ...
read bfabricposturl https://fgcz-c-072.uzh.ch:5000/.
Request started from user mderrico
test
22
488894
sample488895list(`_id` = 2000, name = "Metabolites")list(`_classname` = "project", `_id` = 31230)2023-03-27 15:36:25othmanfalselist(`_id` = 3522, name = "80%methanol, 20%water")2023-05-15 12:53:37othmanQGenTest12list(`_id` = 480, name = "n/a")MET_LC_SOPslist(`_id` = 3046, name = "Homo sapiens (human)")Tube12Biological Sample - Metabolomicstrue
sample488894list(`_id` = 2000, name = "Metabolites")list(`_classname` = "project", `_id` = 31230)2023-03-27 15:36:25othmanfalselist(`_id` = 3522, name = "80%methanol, 20%water")2023-05-15 12:53:37othmanQGenTest11list(`_id` = 480, name = "n/a")MET_LC_SOPslist(`_id` = 3046, name = "Homo sapiens (human)")Tube11Biological Sample - Metabolomicstrue
sample488893list(`_id` = 2000, name = "Metabolites")list(`_classname` = "project", `_id` = 31230)2023-03-27 15:36:25othmanfalselist(`_id` = 3522, name = "80%methanol, 20%water")2023-05-15 12:53:37othmanQGenTest10list(`_id` = 480, name = "n/a")MET_LC_SOPslist(`_id` = 3046, name = "Homo sapiens (human)")Tube10Biological Sample - Metabolomicstrue
sample488892list(`_id` = 2000, name = "Metabolites")list(`_classname` = "project", `_id` = 31230)2023-03-27 15:36:25othmanfalselist(`_id` = 3522, name = "80%methanol, 20%water")2023-05-15 12:53:37othmanQGenTest9list(`_id` = 480, name = "n/a")MET_LC_SOPslist(`_id` = 3046, name = "Homo sapiens (human)")Tube9Biological Sample - Metabolomicstrue
sample488891list(`_id` = 2000, name = "Metabolites")list(`_classname` = "project", `_id` = 31230)2023-03-27 15:36:25othmanfalselist(`_id` = 3522, name = "80%methanol, 20%water")2023-05-15 12:53:37othmanQGenTest8list(`_id` = 480, name = "n/a")MET_LC_SOPslist(`_id` = 3046, name = "Homo sapiens (human)")Tube8Biological Sample - Metabolomicstrue
sample488890list(`_id` = 2000, name = "Metabolites")list(`_classname` = "project", `_id` = 31230)2023-03-27 15:36:25othmanfalselist(`_id` = 3522, name = "80%methanol, 20%water")2023-05-15 12:53:37othmanQGenTest7list(`_id` = 480, name = "n/a")MET_LC_SOPslist(`_id` = 3046, name = "Homo sapiens (human)")Tube7Biological Sample - Metabolomicstrue
sample488889list(`_id` = 2000, name = "Metabolites")list(`_classname` = "project", `_id` = 31230)2023-03-27 15:36:25othmanfalselist(`_id` = 3522, name = "80%methanol, 20%water")2023-05-15 12:53:37othmanQGenTest6list(`_id` = 480, name = "n/a")MET_LC_SOPslist(`_id` = 3046, name = "Homo sapiens (human)")Tube6Biological Sample - Metabolomicstrue
sample488888list(`_id` = 2000, name = "Metabolites")list(`_classname` = "project", `_id` = 31230)2023-03-27 15:36:25othmanfalselist(`_id` = 3522, name = "80%methanol, 20%water")2023-05-15 12:53:37othmanQGenTest5list(`_id` = 480, name = "n/a")MET_LC_SOPslist(`_id` = 3046, name = "Homo sapiens (human)")Tube5Biological Sample - Metabolomicstrue
sample488887list(`_id` = 2000, name = "Metabolites")list(`_classname` = "project", `_id` = 31230)2023-03-27 15:36:25othmanfalselist(`_id` = 3522, name = "80%methanol, 20%water")2023-05-15 12:53:37othmanQGenTest4list(`_id` = 480, name = "n/a")MET_LC_SOPslist(`_id` = 3046, name = "Homo sapiens (human)")Tube4Biological Sample - Metabolomicstrue
sample488886list(`_id` = 2000, name = "Metabolites")list(`_classname` = "project", `_id` = 31230)2023-03-27 15:36:25othmanfalselist(`_id` = 3522, name = "80%methanol, 20%water")2023-05-15 12:53:37othmanQGenTest3list(`_id` = 480, name = "n/a")MET_LC_SOPslist(`_id` = 3046, name = "Homo sapiens (human)")Tube3Biological Sample - Metabolomicstrue
sample488885list(`_id` = 2000, name = "Metabolites")list(`_classname` = "project", `_id` = 31230)2023-03-27 15:36:25othmanfalselist(`_id` = 3522, name = "80%methanol, 20%water")2023-05-15 12:53:37othmanQGenTest2list(`_id` = 480, name = "n/a")MET_LC_SOPslist(`_id` = 3046, name = "Homo sapiens (human)")Tube2Biological Sample - Metabolomicstrue
sample488884list(`_id` = 2000, name = "Metabolites")list(`_classname` = "project", `_id` = 31230)2023-03-27 15:36:25othmanfalselist(`_id` = 3522, name = "80%methanol, 20%water")2023-05-15 12:53:37othmanQGenTest1list(`_id` = 480, name = "n/a")MET_LC_SOPslist(`_id` = 3046, name = "Homo sapiens (human)")Tube1Biological Sample - Metabolomicstrue
sample509294list(`_classname` = "project", `_id` = 31230)2023-05-15 12:38:09othmanfalse2023-05-15 12:53:37othmanPlate_2200_5list(list(`_classname` = "sample", `_id` = 509293))Polar_NIST1950Biological Sample - Metabolomicstrue
sample509295list(`_classname` = "project", `_id` = 31230)2023-05-15 12:38:09othmanfalse2023-05-15 12:53:37othmanPlate_2200_6list(list(`_classname` = "sample", `_id` = 509292))BlankBiological Sample - Metabolomicstrue
sample509302list(`_classname` = "project", `_id` = 31230)2023-05-15 12:43:44othmanfalse2023-05-15 12:53:37othmanPlate_2200_7list(list(`_classname` = "sample", `_id` = 509296))PooledSample_1xBiological Sample - Metabolomicstrue
sample509303list(`_classname` = "project", `_id` = 31230)2023-05-15 12:44:38othmanfalse2023-05-15 12:53:37othmanPlate_2200_8list(list(`_classname` = "sample", `_id` = 509301))PooledSample_dil5Biological Sample - Metabolomicstrue
sample509306list(`_classname` = "project", `_id` = 31230)2023-05-15 12:44:38othmanfalse2023-05-15 12:53:37othmanPlate_2200_11list(list(`_classname` = "sample", `_id` = 509298))PooledSample_dil2Biological Sample - Metabolomicstrue
sample509305list(`_classname` = "project", `_id` = 31230)2023-05-15 12:44:38othmanfalse2023-05-15 12:53:37othmanPlate_2200_10list(list(`_classname` = "sample", `_id` = 509299))PooledSample_dil3Biological Sample - Metabolomicstrue
sample509304list(`_classname` = "project", `_id` = 31230)2023-05-15 12:44:38othmanfalse2023-05-15 12:53:37othmanPlate_2200_9list(list(`_classname` = "sample", `_id` = 509300))PooledSample_dil4Biological Sample - Metabolomicstrue
sample509307list(`_classname` = "project", `_id` = 31230)2023-05-15 12:44:38othmanfalse2023-05-15 12:53:37othmanPlate_2200_12list(list(`_classname` = "sample", `_id` = 509297))PooledSample_dil1Biological Sample - Metabolomicstrue
sample509313list(`_classname` = "project", `_id` = 31230)2023-05-15 12:53:19othmanfalse2023-05-15 12:53:37othmanPlate_2200_14list(list(`_classname` = "sample", `_id` = 509308))PooledSample_2xBiological Sample - Metabolomicstrue
sample509312list(`_classname` = "project", `_id` = 31230)2023-05-15 12:53:19othmanfalse2023-05-15 12:53:37othmanPlate_2200_13list(list(`_classname` = "sample", `_id` = 509309))PooledSample_DDA_IterBiological Sample - Metabolomicstrue
488895488894488893488892488891488890488889488888488887488886488885488884509294509295509302509303509306509305509304509307509313509312
Warning: Error in <Anonymous>: arguments imply differing number of rows: 22, 0
  87: stop
  86: <Anonymous>
  84: as.data.frame.list
  82: data.frame
  81: output$outputKable [/home/mderrico/_checkouts/bfabricShiny/inst/shiny/extractPlateId/server.R#119]
   1: runApp
saving 'login and webservicepassword' ...
read bfabricposturl https://fgcz-c-072.uzh.ch:5000/.
Request started from user mderrico
test
22
488894
list(`_classname` = "sample", `_id` = 488895, compoundclass = list(`_id` = 2000, name = "Metabolites"), container = list(`_classname` = "project", `_id` = 31230), created = "2023-03-27 15:36:25", createdby = "othman", deletable = "false", extractionprotocol = list(`_id` = 3522, name = "80%methanol, 20%water"), modified = "2023-05-15 12:53:37", modifiedby = "othman", name = "QGenTest12", organismpart = list(`_id` = 480, name = "n/a"), samplepreparationprotocol = "MET_LC_SOPs", species = list(`_id` = 3046, 
    name = "Homo sapiens (human)"), tubeid = "Tube12", type = "Biological Sample - Metabolomics", updatable = "true")
Warning: Error in $: $ operator is invalid for atomic vectors
  100: read_sample [/home/mderrico/_checkouts/bfabricShiny/inst/shiny/extractPlateId/server.R#74]
   98: <reactive:read_plate> [/home/mderrico/_checkouts/bfabricShiny/inst/shiny/extractPlateId/server.R#102]
   82: read_plate
   81: output$outputKable [/home/mderrico/_checkouts/bfabricShiny/inst/shiny/extractPlateId/server.R#118]
    1: runApp
saving 'login and webservicepassword' ...
read bfabricposturl https://fgcz-c-072.uzh.ch:5000/.
Request started from user mderrico
test
22
488894
list(`_classname` = "sample", `_id` = 488895, compoundclass = list(`_id` = 2000, name = "Metabolites"), container = list(`_classname` = "project", `_id` = 31230), created = "2023-03-27 15:36:25", createdby = "othman", deletable = "false", extractionprotocol = list(`_id` = 3522, name = "80%methanol, 20%water"), modified = "2023-05-15 12:53:37", modifiedby = "othman", name = "QGenTest12", organismpart = list(`_id` = 480, name = "n/a"), samplepreparationprotocol = "MET_LC_SOPs", species = list(`_id` = 3046, 
    name = "Homo sapiens (human)"), tubeid = "Tube12", type = "Biological Sample - Metabolomics", updatable = "true")
list(`_classname` = "sample", `_id` = 488894, compoundclass = list(`_id` = 2000, name = "Metabolites"), container = list(`_classname` = "project", `_id` = 31230), created = "2023-03-27 15:36:25", createdby = "othman", deletable = "false", extractionprotocol = list(`_id` = 3522, name = "80%methanol, 20%water"), modified = "2023-05-15 12:53:37", modifiedby = "othman", name = "QGenTest11", organismpart = list(`_id` = 480, name = "n/a"), samplepreparationprotocol = "MET_LC_SOPs", species = list(`_id` = 3046, 
    name = "Homo sapiens (human)"), tubeid = "Tube11", type = "Biological Sample - Metabolomics", updatable = "true")
list(`_classname` = "sample", `_id` = 488893, compoundclass = list(`_id` = 2000, name = "Metabolites"), container = list(`_classname` = "project", `_id` = 31230), created = "2023-03-27 15:36:25", createdby = "othman", deletable = "false", extractionprotocol = list(`_id` = 3522, name = "80%methanol, 20%water"), modified = "2023-05-15 12:53:37", modifiedby = "othman", name = "QGenTest10", organismpart = list(`_id` = 480, name = "n/a"), samplepreparationprotocol = "MET_LC_SOPs", species = list(`_id` = 3046, 
    name = "Homo sapiens (human)"), tubeid = "Tube10", type = "Biological Sample - Metabolomics", updatable = "true")
list(`_classname` = "sample", `_id` = 488892, compoundclass = list(`_id` = 2000, name = "Metabolites"), container = list(`_classname` = "project", `_id` = 31230), created = "2023-03-27 15:36:25", createdby = "othman", deletable = "false", extractionprotocol = list(`_id` = 3522, name = "80%methanol, 20%water"), modified = "2023-05-15 12:53:37", modifiedby = "othman", name = "QGenTest9", organismpart = list(`_id` = 480, name = "n/a"), samplepreparationprotocol = "MET_LC_SOPs", species = list(`_id` = 3046, 
    name = "Homo sapiens (human)"), tubeid = "Tube9", type = "Biological Sample - Metabolomics", updatable = "true")
list(`_classname` = "sample", `_id` = 488891, compoundclass = list(`_id` = 2000, name = "Metabolites"), container = list(`_classname` = "project", `_id` = 31230), created = "2023-03-27 15:36:25", createdby = "othman", deletable = "false", extractionprotocol = list(`_id` = 3522, name = "80%methanol, 20%water"), modified = "2023-05-15 12:53:37", modifiedby = "othman", name = "QGenTest8", organismpart = list(`_id` = 480, name = "n/a"), samplepreparationprotocol = "MET_LC_SOPs", species = list(`_id` = 3046, 
    name = "Homo sapiens (human)"), tubeid = "Tube8", type = "Biological Sample - Metabolomics", updatable = "true")
list(`_classname` = "sample", `_id` = 488890, compoundclass = list(`_id` = 2000, name = "Metabolites"), container = list(`_classname` = "project", `_id` = 31230), created = "2023-03-27 15:36:25", createdby = "othman", deletable = "false", extractionprotocol = list(`_id` = 3522, name = "80%methanol, 20%water"), modified = "2023-05-15 12:53:37", modifiedby = "othman", name = "QGenTest7", organismpart = list(`_id` = 480, name = "n/a"), samplepreparationprotocol = "MET_LC_SOPs", species = list(`_id` = 3046, 
    name = "Homo sapiens (human)"), tubeid = "Tube7", type = "Biological Sample - Metabolomics", updatable = "true")
list(`_classname` = "sample", `_id` = 488889, compoundclass = list(`_id` = 2000, name = "Metabolites"), container = list(`_classname` = "project", `_id` = 31230), created = "2023-03-27 15:36:25", createdby = "othman", deletable = "false", extractionprotocol = list(`_id` = 3522, name = "80%methanol, 20%water"), modified = "2023-05-15 12:53:37", modifiedby = "othman", name = "QGenTest6", organismpart = list(`_id` = 480, name = "n/a"), samplepreparationprotocol = "MET_LC_SOPs", species = list(`_id` = 3046, 
    name = "Homo sapiens (human)"), tubeid = "Tube6", type = "Biological Sample - Metabolomics", updatable = "true")
list(`_classname` = "sample", `_id` = 488888, compoundclass = list(`_id` = 2000, name = "Metabolites"), container = list(`_classname` = "project", `_id` = 31230), created = "2023-03-27 15:36:25", createdby = "othman", deletable = "false", extractionprotocol = list(`_id` = 3522, name = "80%methanol, 20%water"), modified = "2023-05-15 12:53:37", modifiedby = "othman", name = "QGenTest5", organismpart = list(`_id` = 480, name = "n/a"), samplepreparationprotocol = "MET_LC_SOPs", species = list(`_id` = 3046, 
    name = "Homo sapiens (human)"), tubeid = "Tube5", type = "Biological Sample - Metabolomics", updatable = "true")
list(`_classname` = "sample", `_id` = 488887, compoundclass = list(`_id` = 2000, name = "Metabolites"), container = list(`_classname` = "project", `_id` = 31230), created = "2023-03-27 15:36:25", createdby = "othman", deletable = "false", extractionprotocol = list(`_id` = 3522, name = "80%methanol, 20%water"), modified = "2023-05-15 12:53:37", modifiedby = "othman", name = "QGenTest4", organismpart = list(`_id` = 480, name = "n/a"), samplepreparationprotocol = "MET_LC_SOPs", species = list(`_id` = 3046, 
    name = "Homo sapiens (human)"), tubeid = "Tube4", type = "Biological Sample - Metabolomics", updatable = "true")
list(`_classname` = "sample", `_id` = 488886, compoundclass = list(`_id` = 2000, name = "Metabolites"), container = list(`_classname` = "project", `_id` = 31230), created = "2023-03-27 15:36:25", createdby = "othman", deletable = "false", extractionprotocol = list(`_id` = 3522, name = "80%methanol, 20%water"), modified = "2023-05-15 12:53:37", modifiedby = "othman", name = "QGenTest3", organismpart = list(`_id` = 480, name = "n/a"), samplepreparationprotocol = "MET_LC_SOPs", species = list(`_id` = 3046, 
    name = "Homo sapiens (human)"), tubeid = "Tube3", type = "Biological Sample - Metabolomics", updatable = "true")
list(`_classname` = "sample", `_id` = 488885, compoundclass = list(`_id` = 2000, name = "Metabolites"), container = list(`_classname` = "project", `_id` = 31230), created = "2023-03-27 15:36:25", createdby = "othman", deletable = "false", extractionprotocol = list(`_id` = 3522, name = "80%methanol, 20%water"), modified = "2023-05-15 12:53:37", modifiedby = "othman", name = "QGenTest2", organismpart = list(`_id` = 480, name = "n/a"), samplepreparationprotocol = "MET_LC_SOPs", species = list(`_id` = 3046, 
    name = "Homo sapiens (human)"), tubeid = "Tube2", type = "Biological Sample - Metabolomics", updatable = "true")
list(`_classname` = "sample", `_id` = 488884, compoundclass = list(`_id` = 2000, name = "Metabolites"), container = list(`_classname` = "project", `_id` = 31230), created = "2023-03-27 15:36:25", createdby = "othman", deletable = "false", extractionprotocol = list(`_id` = 3522, name = "80%methanol, 20%water"), modified = "2023-05-15 12:53:37", modifiedby = "othman", name = "QGenTest1", organismpart = list(`_id` = 480, name = "n/a"), samplepreparationprotocol = "MET_LC_SOPs", species = list(`_id` = 3046, 
    name = "Homo sapiens (human)"), tubeid = "Tube1", type = "Biological Sample - Metabolomics", updatable = "true")
list(`_classname` = "sample", `_id` = 509294, container = list(`_classname` = "project", `_id` = 31230), created = "2023-05-15 12:38:09", createdby = "othman", deletable = "false", modified = "2023-05-15 12:53:37", modifiedby = "othman", name = "Plate_2200_5", parent = list(list(`_classname` = "sample", `_id` = 509293)), tubeid = "Polar_NIST1950", type = "Biological Sample - Metabolomics", updatable = "true")
list(`_classname` = "sample", `_id` = 509293, child = list(list(`_classname` = "sample", `_id` = 509294)), container = list(`_classname` = "project", `_id` = 31230), created = "2023-05-15 12:30:25", createdby = "othman", deletable = "false", modified = "2023-05-15 12:37:26", modifiedby = "othman", name = "Polar_NIST1950", tubeid = "Polar_NIST1950", type = "Control Sample", updatable = "true")
list(`_classname` = "sample", `_id` = 509295, container = list(`_classname` = "project", `_id` = 31230), created = "2023-05-15 12:38:09", createdby = "othman", deletable = "false", modified = "2023-05-15 12:53:37", modifiedby = "othman", name = "Plate_2200_6", parent = list(list(`_classname` = "sample", `_id` = 509292)), tubeid = "Blank", type = "Biological Sample - Metabolomics", updatable = "true")
list(`_classname` = "sample", `_id` = 509292, child = list(list(`_classname` = "sample", `_id` = 509295)), container = list(`_classname` = "project", `_id` = 31230), created = "2023-05-15 12:29:24", createdby = "othman", deletable = "false", modified = "2023-05-15 12:35:12", modifiedby = "othman", name = "Solvent_Blank", tubeid = "Blank", type = "Control Sample", updatable = "true")
list(`_classname` = "sample", `_id` = 509302, container = list(`_classname` = "project", `_id` = 31230), created = "2023-05-15 12:43:44", createdby = "othman", deletable = "false", modified = "2023-05-15 12:53:37", modifiedby = "othman", name = "Plate_2200_7", parent = list(list(`_classname` = "sample", `_id` = 509296)), tubeid = "PooledSample_1x", type = "Biological Sample - Metabolomics", updatable = "true")
list(`_classname` = "sample", `_id` = 509296, child = list(list(`_classname` = "sample", `_id` = 509302)), container = list(`_classname` = "project", `_id` = 31230), created = "2023-05-15 12:39:26", createdby = "othman", deletable = "false", modified = "2023-05-15 12:39:26", modifiedby = "othman", name = "Pooled_Sample_1x", tubeid = "PooledSample_1x", type = "Control Sample", updatable = "true")
list(`_classname` = "sample", `_id` = 509303, container = list(`_classname` = "project", `_id` = 31230), created = "2023-05-15 12:44:38", createdby = "othman", deletable = "false", modified = "2023-05-15 12:53:37", modifiedby = "othman", name = "Plate_2200_8", parent = list(list(`_classname` = "sample", `_id` = 509301)), tubeid = "PooledSample_dil5", type = "Biological Sample - Metabolomics", updatable = "true")
list(`_classname` = "sample", `_id` = 509301, child = list(list(`_classname` = "sample", `_id` = 509303)), container = list(`_classname` = "project", `_id` = 31230), created = "2023-05-15 12:43:32", createdby = "othman", deletable = "false", modified = "2023-05-15 12:43:32", modifiedby = "othman", name = "Pooled_Sample_dil5", tubeid = "PooledSample_dil5", type = "Control Sample", updatable = "true")
list(`_classname` = "sample", `_id` = 509306, container = list(`_classname` = "project", `_id` = 31230), created = "2023-05-15 12:44:38", createdby = "othman", deletable = "false", modified = "2023-05-15 12:53:37", modifiedby = "othman", name = "Plate_2200_11", parent = list(list(`_classname` = "sample", `_id` = 509298)), tubeid = "PooledSample_dil2", type = "Biological Sample - Metabolomics", updatable = "true")
list(`_classname` = "sample", `_id` = 509298, child = list(list(`_classname` = "sample", `_id` = 509306)), container = list(`_classname` = "project", `_id` = 31230), created = "2023-05-15 12:41:26", createdby = "othman", deletable = "false", modified = "2023-05-15 12:41:26", modifiedby = "othman", name = "Pooled_Sample_dil2", tubeid = "PooledSample_dil2", type = "Control Sample", updatable = "true")
list(`_classname` = "sample", `_id` = 509305, container = list(`_classname` = "project", `_id` = 31230), created = "2023-05-15 12:44:38", createdby = "othman", deletable = "false", modified = "2023-05-15 12:53:37", modifiedby = "othman", name = "Plate_2200_10", parent = list(list(`_classname` = "sample", `_id` = 509299)), tubeid = "PooledSample_dil3", type = "Biological Sample - Metabolomics", updatable = "true")
list(`_classname` = "sample", `_id` = 509299, child = list(list(`_classname` = "sample", `_id` = 509305)), container = list(`_classname` = "project", `_id` = 31230), created = "2023-05-15 12:42:11", createdby = "othman", deletable = "false", modified = "2023-05-15 12:42:11", modifiedby = "othman", name = "Pooled_Sample_dil3", tubeid = "PooledSample_dil3", type = "Control Sample", updatable = "true")
list(`_classname` = "sample", `_id` = 509304, container = list(`_classname` = "project", `_id` = 31230), created = "2023-05-15 12:44:38", createdby = "othman", deletable = "false", modified = "2023-05-15 12:53:37", modifiedby = "othman", name = "Plate_2200_9", parent = list(list(`_classname` = "sample", `_id` = 509300)), tubeid = "PooledSample_dil4", type = "Biological Sample - Metabolomics", updatable = "true")
list(`_classname` = "sample", `_id` = 509300, child = list(list(`_classname` = "sample", `_id` = 509304)), container = list(`_classname` = "project", `_id` = 31230), created = "2023-05-15 12:42:47", createdby = "othman", deletable = "false", modified = "2023-05-15 12:42:47", modifiedby = "othman", name = "Pooled_Sample_dil4", tubeid = "PooledSample_dil4", type = "Control Sample", updatable = "true")
list(`_classname` = "sample", `_id` = 509307, container = list(`_classname` = "project", `_id` = 31230), created = "2023-05-15 12:44:38", createdby = "othman", deletable = "false", modified = "2023-05-15 12:53:37", modifiedby = "othman", name = "Plate_2200_12", parent = list(list(`_classname` = "sample", `_id` = 509297)), tubeid = "PooledSample_dil1", type = "Biological Sample - Metabolomics", updatable = "true")
list(`_classname` = "sample", `_id` = 509297, child = list(list(`_classname` = "sample", `_id` = 509307)), container = list(`_classname` = "project", `_id` = 31230), created = "2023-05-15 12:40:48", createdby = "othman", deletable = "false", modified = "2023-05-15 12:40:48", modifiedby = "othman", name = "Pooled_Sample_dil1", tubeid = "PooledSample_dil1", type = "Control Sample", updatable = "true")
list(`_classname` = "sample", `_id` = 509313, container = list(`_classname` = "project", `_id` = 31230), created = "2023-05-15 12:53:19", createdby = "othman", deletable = "false", modified = "2023-05-15 12:53:37", modifiedby = "othman", name = "Plate_2200_14", parent = list(list(`_classname` = "sample", `_id` = 509308)), tubeid = "PooledSample_2x", type = "Biological Sample - Metabolomics", updatable = "true")
list(`_classname` = "sample", `_id` = 509308, child = list(list(`_classname` = "sample", `_id` = 509313)), container = list(`_classname` = "project", `_id` = 31230), created = "2023-05-15 12:45:54", createdby = "othman", deletable = "false", modified = "2023-05-15 12:45:54", modifiedby = "othman", name = "Pooled_Sample_2x", tubeid = "PooledSample_2x", type = "Control Sample", updatable = "true")
list(`_classname` = "sample", `_id` = 509312, container = list(`_classname` = "project", `_id` = 31230), created = "2023-05-15 12:53:19", createdby = "othman", deletable = "false", modified = "2023-05-15 12:53:37", modifiedby = "othman", name = "Plate_2200_13", parent = list(list(`_classname` = "sample", `_id` = 509309)), tubeid = "PooledSample_DDA_Iter", type = "Biological Sample - Metabolomics", updatable = "true")
list(`_classname` = "sample", `_id` = 509309, child = list(list(`_classname` = "sample", `_id` = 509312)), container = list(`_classname` = "project", `_id` = 31230), created = "2023-05-15 12:47:31", createdby = "othman", deletable = "false", modified = "2023-05-15 12:47:31", modifiedby = "othman", name = "Pooled_Sample_DDA_Iter", tubeid = "PooledSample_DDA_Iter", type = "Control Sample", updatable = "true")
488895488894488893488892488891488890488889488888488887488886488885488884509294509295509302509303509306509305509304509307509313509312
saving 'login and webservicepassword' ...
read bfabricposturl https://fgcz-c-072.uzh.ch:5000/.


Execution halted