Listening on http://127.0.0.1:35483 Attaching package: 'shinydashboard' The following object is masked from 'package:graphics': box Loading required package: readr Loading required package: reshape2 Loading required package: lattice Loading required package: rawrr Loading required package: bfabricShiny Attaching package: 'bfabricShiny' The following object is masked from 'package:base': save Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$autoQC01Plot 1: runApp r.squared;slope;intercept Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$cometPlot 1: runApp Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$autoQC01Plot 1: runApp r.squared;slope;intercept Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$cometPlot 1: runApp 252;335;-1;-1;214;93 Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$autoQC01Plot 1: runApp r.squared;slope;intercept Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$cometPlot 1: runApp Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$autoQC01Plot 1: runApp r.squared;slope;intercept Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$cometPlot 1: runApp Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$autoQC01Plot 1: runApp r.squared;slope;intercept Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$cometPlot 1: runApp Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$autoQC01Plot 1: runApp r.squared;slope;intercept r.squared;slope;intercept r.squared;slope;intercept r.squared;slope;intercept r.squared;slope;intercept r.squared;slope;intercept r.squared;slope;intercept r.squared;slope;intercept r.squared;slope r.squared Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$cometPlot 1: runApp Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$autoQC01Plot 1: runApp r.squared;slope;intercept Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$cometPlot 1: runApp Warning in as.integer(bfabricInstrumentEvents()$instrumentid) %in% (as.integer(unlist(.getInstruments()[input$instrument]))) & : longer object length is not a multiple of shorter object length Warning in as.integer(bfabricInstrumentEvents()$instrumentid) %in% (as.integer(unlist(.getInstruments()[input$instrument]))) & : longer object length is not a multiple of shorter object length Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$autoQC01Plot 1: runApp r.squared;slope;intercept Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$cometPlot 1: runApp Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$autoQC01Plot 1: runApp r.squared;slope;intercept Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$cometPlot 1: runApp Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$autoQC01Plot 1: runApp r.squared;slope;intercept Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$cometPlot 1: runApp Warning: Error in if: argument is of length zero 97: renderUI [/export/data01/scratch/DIAQC/qc/inst/shiny/fgczmsqc-dashboard/server.R#544] 96: func 83: renderFunc 82: output$fileOutput 1: runApp Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$plotTIC 1: runApp Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$diannPlot 1: runApp Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$autoQC01Plot 1: runApp r.squared;slope;intercept Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$cometPlot 1: runApp Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$autoQC01Plot 1: runApp r.squared;slope;intercept Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$cometPlot 1: runApp Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$plotTIC 1: runApp Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$autoQC01Plot 1: runApp r.squared;slope;intercept Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$cometPlot 1: runApp Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$autoQC01Plot 1: runApp r.squared;slope;intercept Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$cometPlot 1: runApp Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$autoQC01Plot 1: runApp r.squared;slope;intercept Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$cometPlot 1: runApp Warning in comet()$instrument %in% input$instrument & input$cometDays[1] <= : longer object length is not a multiple of shorter object length Warning in comet()$instrument %in% input$instrument & input$cometDays[1] <= : longer object length is not a multiple of shorter object length Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$autoQC01Plot 1: runApp r.squared;slope;intercept Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$cometPlot 1: runApp Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$autoQC01Plot 1: runApp r.squared;slope;intercept Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$diannPlot 1: runApp Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$cometPlot 1: runApp r.squared;slope;intercept r.squared;slope;intercept Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$diannPlot 1: runApp r.squared;slope;intercept r.squared;slope;intercept r.squared;slope;intercept r.squared;slope;intercept r.squared;slope;intercept Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$autoQC01Plot 1: runApp r.squared;slope;intercept Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$cometPlot 1: runApp Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$diannPlot 1: runApp Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$cometPlot 1: runApp r.squared;slope;intercept r.squared;slope;intercept r.squared;slope;intercept r.squared;slope;intercept r.squared;slope;intercept r.squared;slope;intercept Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$autoQC01Plot 1: runApp Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$autoQC01Plot 1: runApp Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$autoQC01Plot 1: runApp r.squared;slope;intercept r.squared;slope;intercept Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$cometPlot 1: runApp Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$plotTIC 1: runApp Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$diannPlot 1: runApp Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$autoQC01Plot 1: runApp r.squared;slope;intercept Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$cometPlot 1: runApp Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$diannPlot 1: runApp r.squared;slope;intercept r.squared;slope;intercept r.squared;slope;intercept r.squared;slope;intercept r.squared;slope;intercept r.squared;slope;intercept r.squared;slope;intercept r.squared;slope;intercept r.squared;slope;intercept r.squared;slope;intercept r.squared;slope;intercept r.squared;slope;intercept Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$plotTIC 1: runApp r.squared;slope;intercept Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$autoQC01Plot 1: runApp r.squared;slope;intercept r.squared;slope;intercept r.squared;slope;intercept r.squared;slope;intercept Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$diannPlot 1: runApp Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$cometPlot 1: runApp Warning: The select input "ticfile" contains a large number of options; consider using server-side selectize for massively improved performance. See the Details section of the ?selectizeInput help topic. r.squared;slope;intercept r.squared;slope;intercept r.squared;slope;intercept r.squared;slope;intercept r.squared;slope;intercept r.squared;slope;intercept r.squared;slope;intercept r.squared;slope;intercept r.squared;slope;intercept r.squared;slope;intercept r.squared;slope;intercept r.squared;slope;intercept r.squared;slope;intercept r.squared;slope;intercept r.squared;slope;intercept r.squared;slope;intercept r.squared;slope;intercept Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$autoQC01Plot 1: runApp r.squared;slope;intercept Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$cometPlot 1: runApp r.squared;slope;intercept Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$autoQC01Plot 1: runApp r.squared;slope;intercept Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$cometPlot 1: runApp r.squared;slope;intercept r.squared;slope;intercept r.squared;slope;intercept r.squared;slope;intercept r.squared;slope;intercept r.squared;slope;intercept r.squared;slope;intercept r.squared;slope;intercept r.squared;slope;intercept r.squared;slope;intercept r.squared;slope;intercept r.squared;slope;intercept r.squared;slope;intercept Warning: Error in if: argument is of length zero 97: renderUI [/export/data01/scratch/DIAQC/qc/inst/shiny/fgczmsqc-dashboard/server.R#553] 96: func 83: renderFunc 82: output$fileOutput 1: runApp r.squared;slope;intercept Execution halted There were 50 or more warnings (use warnings() to see the first 50)