Listening on http://127.0.0.1:36257

Attaching package: 'shinydashboard'

The following object is masked from 'package:graphics':

    box

Loading required package: readr
Loading required package: reshape2
Loading required package: lattice
Loading required package: rawrr
input timeRange: 1209600 | timeMin: 2023-11-09 07:38:19.970737 | timeMax: 2023-11-16 07:38:20.157516 | timeDiff: 604800.186779022
Loading required package: bfabricShiny

Attaching package: 'bfabricShiny'

The following object is masked from 'package:base':

    save

input timeRange: 1209600 | timeMin: 2023-11-09 06:38:19.971 | timeMax: 2023-11-16 06:38:20.158 | timeDiff: 604800.187000036
autoQC01 module APEX wide nrow: 244574
autoQC01 module APEX long nrow: 90
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUC
Warning: Removed 24 rows containing missing values (`geom_point()`).
autoQC01 module APEX long nrow: 45
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUC
Warning: Removed 3 rows containing missing values (`geom_point()`).
cometTimes:507 | 74555
comet filter length: 0
Warning: Error in graphics::plot.new: figure margins too large
  130: graphics::plot.new
  127: startPNG
  126: drawPlot
  112: <reactive:plotObj>
   96: drawReactive
   83: renderFunc
   82: output$plotTIC
    1: runApp
Warning: Error in if: argument is of length zero
  97: renderUI [/export/data01/scratch/DIAQC/qc/inst/shiny/fgczmsqc-dashboard/server.R#594]
  96: func
  83: renderFunc
  82: output$fileOutput
   1: runApp
input timeRange: 1209600 | timeMin: 2023-11-09 07:53:50.241637 | timeMax: 2023-11-16 07:53:50.321664 | timeDiff: 604800.080027103
input timeRange: 1209600 | timeMin: 2023-11-09 06:53:50.242 | timeMax: 2023-11-16 06:53:50.322 | timeDiff: 604800.079999924
autoQC01 module APEX wide nrow: 244574
autoQC01 module APEX long nrow: 90
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUC
Warning: Removed 24 rows containing missing values (`geom_point()`).
autoQC01 module APEX long nrow: 120
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR
AUC
Warning: Removed 27 rows containing missing values (`geom_point()`).
autoQC01 module APEX long nrow: 150
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, GTFIIDPAAVIR
AUC
Warning: Removed 36 rows containing missing values (`geom_point()`).
autoQC01 module APEX long nrow: 180
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, GTFIIDPAAVIR, GAGSSEPVTGLDAK
AUC
Warning: Removed 42 rows containing missing values (`geom_point()`).
autoQC01 module APEX long nrow: 210
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, GTFIIDPAAVIR, GAGSSEPVTGLDAK, VEATFGVDESNAK
AUC
Warning: Removed 51 rows containing missing values (`geom_point()`).
autoQC01 module APEX long nrow: 240
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, GTFIIDPAAVIR, GAGSSEPVTGLDAK, VEATFGVDESNAK, TPVITGAPYEYR
AUC
Warning: Removed 66 rows containing missing values (`geom_point()`).
autoQC01 module APEX long nrow: 270
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, GTFIIDPAAVIR, GAGSSEPVTGLDAK, VEATFGVDESNAK, TPVITGAPYEYR, DGLDAASYYAPVR
AUC
Warning: Removed 72 rows containing missing values (`geom_point()`).
autoQC01 module APEX long nrow: 300
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, GTFIIDPAAVIR, GAGSSEPVTGLDAK, VEATFGVDESNAK, TPVITGAPYEYR, DGLDAASYYAPVR, ADVTPADFSEWSK
AUC
Warning: Removed 72 rows containing missing values (`geom_point()`).
autoQC01 module APEX long nrow: 330
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, GTFIIDPAAVIR, GAGSSEPVTGLDAK, VEATFGVDESNAK, TPVITGAPYEYR, DGLDAASYYAPVR, ADVTPADFSEWSK, YILAGVENSK
AUC
Warning: Removed 81 rows containing missing values (`geom_point()`).
autoQC01 module APEX long nrow: 330
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, GTFIIDPAAVIR, GAGSSEPVTGLDAK, VEATFGVDESNAK, TPVITGAPYEYR, DGLDAASYYAPVR, ADVTPADFSEWSK, YILAGVENSK
AUCAPEX
Warning: Removed 81 rows containing missing values (`geom_point()`).
autoQC01 module APEX long nrow: 330
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, GTFIIDPAAVIR, GAGSSEPVTGLDAK, VEATFGVDESNAK, TPVITGAPYEYR, DGLDAASYYAPVR, ADVTPADFSEWSK, YILAGVENSK
AUC
Warning: Removed 81 rows containing missing values (`geom_point()`).


Execution halted
Warning message:
agg could not write to the given file