Listening on http://127.0.0.1:34483

Attaching package: 'shinydashboard'

The following object is masked from 'package:graphics':

    box

Loading required package: readr
Loading required package: reshape2
Loading required package: lattice
Loading required package: rawrr
input timeRange: 7776000 | timeMin: 2023-10-27 12:25:09.82197 | timeMax: 2023-11-17 11:25:09.82264 | timeDiff: 1814400.00066996
Loading required package: bfabricShiny

Attaching package: 'bfabricShiny'

The following object is masked from 'package:base':

    save

input timeRange: 7776000 | timeMin: 2023-10-27 12:25:10.703374 | timeMax: 2023-11-17 11:25:10.704019 | timeDiff: 1814400.00064516
autoQC01 module APEX wide nrow: 244574
autoQC01 module APEX long nrow: 342
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUC
Warning: Removed 30 rows containing missing values (`geom_point()`).
Warning: Removed 3 rows containing missing values (`geom_line()`).
input timeRange: 7776000 | timeMin: 2023-10-27 10:25:09.822 | timeMax: 2023-11-17 10:25:09.823 | timeDiff: 1814400.00099993
autoQC01 module APEX wide nrow: 244574
autoQC01 module APEX long nrow: 342
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUC
Warning: Removed 30 rows containing missing values (`geom_point()`).
Warning: Removed 3 rows containing missing values (`geom_line()`).
input timeRange: 7776000 | timeMin: 2023-10-27 10:25:10.703 | timeMax: 2023-11-17 10:25:10.704 | timeDiff: 1814400.00099993
autoQC01 module APEX long nrow: 504
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUC
Warning: Removed 41 rows containing missing values (`geom_point()`).
input timeRange: 7776000 | timeMin: 2023-10-16 10:25:10.708 | timeMax: 2023-11-17 10:25:10.704 | timeDiff: 2764799.99600005
plot_click: p33274/Proteomics/EXPLORIS_2/analytic_20231106/20231106_C33274_006_autoQC01.raw
plot_click: p33274/Proteomics/EXPLORIS_2/analytic_20231106/20231106_C33274_006_autoQC01.raw
Reading raw file: /srv/www/htdocs//p33274/Proteomics/EXPLORIS_2/analytic_20231106/20231106_C33274_006_autoQC01.raw
length = 3
Plotting chromatograms ...
fn has changed to /srv/www/htdocs//p33274/Proteomics/EXPLORIS_2/analytic_20231106/20231106_C33274_006_autoQC01.raw
plot_click: p33274/Proteomics/EXPLORIS_2/analytic_20231106/20231106_C33274_006_autoQC01.raw
plot_click: p33274/Proteomics/EXPLORIS_2/analytic_20231106/20231106_C33274_006_autoQC01.raw
autoQC01 module APEX long nrow: 342
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUC
Warning: Removed 30 rows containing missing values (`geom_point()`).
Warning: Removed 3 rows containing missing values (`geom_line()`).
input timeRange: 7776000 | timeMin: 2023-10-27 10:25:10.703 | timeMax: 2023-11-17 10:25:10.704 | timeDiff: 1814400.00099993
autoQC01 module APEX long nrow: 504
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUC
Warning: Removed 41 rows containing missing values (`geom_point()`).
input timeRange: 7776000 | timeMin: 2023-10-16 10:25:10.708 | timeMax: 2023-11-17 10:25:10.704 | timeDiff: 2764799.99600005
autoQC01 module APEX long nrow: 342
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUC
Warning: Removed 30 rows containing missing values (`geom_point()`).
Warning: Removed 3 rows containing missing values (`geom_line()`).
input timeRange: 7776000 | timeMin: 2023-10-27 10:25:10.703 | timeMax: 2023-11-17 10:25:10.704 | timeDiff: 1814400.00099993
autoQC01 module APEX long nrow: 504
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUC
Warning: Removed 41 rows containing missing values (`geom_point()`).
input timeRange: 7776000 | timeMin: 2023-10-16 10:25:10.708 | timeMax: 2023-11-17 10:25:10.704 | timeDiff: 2764799.99600005
autoQC01 module APEX long nrow: 342
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUC
Warning: Removed 30 rows containing missing values (`geom_point()`).
Warning: Removed 3 rows containing missing values (`geom_line()`).
input timeRange: 7776000 | timeMin: 2023-10-27 10:25:10.703 | timeMax: 2023-11-17 10:25:10.704 | timeDiff: 1814400.00099993
autoQC01 module APEX long nrow: 456
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR
AUC
Warning: Removed 37 rows containing missing values (`geom_point()`).
Warning: Removed 5 rows containing missing values (`geom_line()`).
autoQC01 module APEX long nrow: 570
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, YILAGVENSK
AUC
Warning: Removed 41 rows containing missing values (`geom_point()`).
Warning: Removed 7 rows containing missing values (`geom_line()`).
input timeRange: 7776000 | timeMin: 2023-10-16 10:25:10.708 | timeMax: 2023-11-17 10:25:10.704 | timeDiff: 2764799.99600005
autoQC01 module APEX long nrow: 840
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, YILAGVENSK
AUC
Warning: Removed 62 rows containing missing values (`geom_point()`).
Warning: Removed 2 rows containing missing values (`geom_line()`).
input timeRange: 7776000 | timeMin: 2023-10-27 10:25:10.703 | timeMax: 2023-11-17 10:25:10.704 | timeDiff: 1814400.00099993
autoQC01 module APEX long nrow: 570
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, YILAGVENSK
AUC
Warning: Removed 41 rows containing missing values (`geom_point()`).
Warning: Removed 7 rows containing missing values (`geom_line()`).
autoQC01 module APEX long nrow: 684
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, YILAGVENSK, GAGSSEPVTGLDAK
AUC
Warning: Removed 53 rows containing missing values (`geom_point()`).
Warning: Removed 9 rows containing missing values (`geom_line()`).
autoQC01 module APEX long nrow: 798
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, YILAGVENSK, GAGSSEPVTGLDAK, TPVITGAPYEYR
AUC
Warning: Removed 64 rows containing missing values (`geom_point()`).
Warning: Removed 13 rows containing missing values (`geom_line()`).
autoQC01 module APEX long nrow: 912
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, YILAGVENSK, GAGSSEPVTGLDAK, TPVITGAPYEYR, VEATFGVDESNAK
AUC
Warning: Removed 74 rows containing missing values (`geom_point()`).
Warning: Removed 14 rows containing missing values (`geom_line()`).
input timeRange: 7776000 | timeMin: 2023-10-16 10:25:10.708 | timeMax: 2023-11-17 10:25:10.704 | timeDiff: 2764799.99600005
autoQC01 module APEX long nrow: 1344
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, YILAGVENSK, GAGSSEPVTGLDAK, TPVITGAPYEYR, VEATFGVDESNAK
AUC
Warning: Removed 110 rows containing missing values (`geom_point()`).
Warning: Removed 4 rows containing missing values (`geom_line()`).
autoQC01 module APEX long nrow: 1512
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, YILAGVENSK, GAGSSEPVTGLDAK, TPVITGAPYEYR, VEATFGVDESNAK, DGLDAASYYAPVR
AUC
Warning: Removed 124 rows containing missing values (`geom_point()`).
Warning: Removed 4 rows containing missing values (`geom_line()`).
autoQC01 module APEX long nrow: 1680
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, YILAGVENSK, GAGSSEPVTGLDAK, TPVITGAPYEYR, VEATFGVDESNAK, DGLDAASYYAPVR, GTFIIDPAAVIR
AUC
Warning: Removed 142 rows containing missing values (`geom_point()`).
Warning: Removed 5 rows containing missing values (`geom_line()`).
autoQC01 module APEX long nrow: 1848
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, YILAGVENSK, GAGSSEPVTGLDAK, TPVITGAPYEYR, VEATFGVDESNAK, DGLDAASYYAPVR, GTFIIDPAAVIR, ADVTPADFSEWSK
AUC
Warning: Removed 151 rows containing missing values (`geom_point()`).
Warning: Removed 5 rows containing missing values (`geom_line()`).
input timeRange: 7776000 | timeMin: 2023-10-27 10:25:10.703 | timeMax: 2023-11-17 10:25:10.704 | timeDiff: 1814400.00099993
autoQC01 module APEX long nrow: 1254
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, YILAGVENSK, GAGSSEPVTGLDAK, TPVITGAPYEYR, VEATFGVDESNAK, DGLDAASYYAPVR, GTFIIDPAAVIR, ADVTPADFSEWSK
AUC
Warning: Removed 98 rows containing missing values (`geom_point()`).
Warning: Removed 18 rows containing missing values (`geom_line()`).
input timeRange: 7776000 | timeMin: 2023-10-16 10:25:10.708 | timeMax: 2023-11-17 10:25:10.704 | timeDiff: 2764799.99600005
autoQC01 module APEX long nrow: 1848
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, YILAGVENSK, GAGSSEPVTGLDAK, TPVITGAPYEYR, VEATFGVDESNAK, DGLDAASYYAPVR, GTFIIDPAAVIR, ADVTPADFSEWSK
AUC
Warning: Removed 151 rows containing missing values (`geom_point()`).
Warning: Removed 5 rows containing missing values (`geom_line()`).
input timeRange: 7776000 | timeMin: 2023-10-27 10:25:10.703 | timeMax: 2023-11-17 10:25:10.704 | timeDiff: 1814400.00099993
autoQC01 module APEX long nrow: 1254
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, YILAGVENSK, GAGSSEPVTGLDAK, TPVITGAPYEYR, VEATFGVDESNAK, DGLDAASYYAPVR, GTFIIDPAAVIR, ADVTPADFSEWSK
AUC
Warning: Removed 98 rows containing missing values (`geom_point()`).
Warning: Removed 18 rows containing missing values (`geom_line()`).
input timeRange: 7776000 | timeMin: 2023-10-16 10:25:10.708 | timeMax: 2023-11-17 10:25:10.704 | timeDiff: 2764799.99600005
autoQC01 module APEX long nrow: 1848
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, YILAGVENSK, GAGSSEPVTGLDAK, TPVITGAPYEYR, VEATFGVDESNAK, DGLDAASYYAPVR, GTFIIDPAAVIR, ADVTPADFSEWSK
AUC
Warning: Removed 151 rows containing missing values (`geom_point()`).
Warning: Removed 5 rows containing missing values (`geom_line()`).
input timeRange: 7776000 | timeMin: 2023-10-27 10:25:10.703 | timeMax: 2023-11-17 10:25:10.704 | timeDiff: 1814400.00099993
autoQC01 module APEX long nrow: 1254
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, YILAGVENSK, GAGSSEPVTGLDAK, TPVITGAPYEYR, VEATFGVDESNAK, DGLDAASYYAPVR, GTFIIDPAAVIR, ADVTPADFSEWSK
AUC
Warning: Removed 98 rows containing missing values (`geom_point()`).
Warning: Removed 18 rows containing missing values (`geom_line()`).
input timeRange: 7776000 | timeMin: 2023-10-16 10:25:10.708 | timeMax: 2023-11-17 10:25:10.704 | timeDiff: 2764799.99600005
autoQC01 module APEX long nrow: 1848
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, YILAGVENSK, GAGSSEPVTGLDAK, TPVITGAPYEYR, VEATFGVDESNAK, DGLDAASYYAPVR, GTFIIDPAAVIR, ADVTPADFSEWSK
AUC
Warning: Removed 151 rows containing missing values (`geom_point()`).
Warning: Removed 5 rows containing missing values (`geom_line()`).
input timeRange: 7776000 | timeMin: 2023-10-27 10:25:10.703 | timeMax: 2023-11-17 10:25:10.704 | timeDiff: 1814400.00099993
autoQC01 module APEX long nrow: 1254
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, YILAGVENSK, GAGSSEPVTGLDAK, TPVITGAPYEYR, VEATFGVDESNAK, DGLDAASYYAPVR, GTFIIDPAAVIR, ADVTPADFSEWSK
AUC
Warning: Removed 98 rows containing missing values (`geom_point()`).
Warning: Removed 18 rows containing missing values (`geom_line()`).
input timeRange: 7776000 | timeMin: 2023-10-16 10:25:10.708 | timeMax: 2023-11-17 10:25:10.704 | timeDiff: 2764799.99600005
autoQC01 module APEX long nrow: 1848
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, YILAGVENSK, GAGSSEPVTGLDAK, TPVITGAPYEYR, VEATFGVDESNAK, DGLDAASYYAPVR, GTFIIDPAAVIR, ADVTPADFSEWSK
AUC
Warning: Removed 151 rows containing missing values (`geom_point()`).
Warning: Removed 5 rows containing missing values (`geom_line()`).
input timeRange: 7776000 | timeMin: 2023-10-27 10:25:10.703 | timeMax: 2023-11-17 10:25:10.704 | timeDiff: 1814400.00099993
autoQC01 module APEX long nrow: 1254
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, YILAGVENSK, GAGSSEPVTGLDAK, TPVITGAPYEYR, VEATFGVDESNAK, DGLDAASYYAPVR, GTFIIDPAAVIR, ADVTPADFSEWSK
AUC
Warning: Removed 98 rows containing missing values (`geom_point()`).
Warning: Removed 18 rows containing missing values (`geom_line()`).
input timeRange: 7776000 | timeMin: 2023-10-16 10:25:10.708 | timeMax: 2023-11-17 10:25:10.704 | timeDiff: 2764799.99600005
autoQC01 module APEX long nrow: 1848
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, YILAGVENSK, GAGSSEPVTGLDAK, TPVITGAPYEYR, VEATFGVDESNAK, DGLDAASYYAPVR, GTFIIDPAAVIR, ADVTPADFSEWSK
AUC
Warning: Removed 151 rows containing missing values (`geom_point()`).
Warning: Removed 5 rows containing missing values (`geom_line()`).
input timeRange: 7776000 | timeMin: 2023-10-27 10:25:10.703 | timeMax: 2023-11-17 10:25:10.704 | timeDiff: 1814400.00099993
autoQC01 module APEX long nrow: 1254
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, YILAGVENSK, GAGSSEPVTGLDAK, TPVITGAPYEYR, VEATFGVDESNAK, DGLDAASYYAPVR, GTFIIDPAAVIR, ADVTPADFSEWSK
AUC
Warning: Removed 98 rows containing missing values (`geom_point()`).
Warning: Removed 18 rows containing missing values (`geom_line()`).
input timeRange: 7776000 | timeMin: 2023-10-16 10:25:10.708 | timeMax: 2023-11-17 10:25:10.704 | timeDiff: 2764799.99600005
autoQC01 module APEX long nrow: 1848
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, YILAGVENSK, GAGSSEPVTGLDAK, TPVITGAPYEYR, VEATFGVDESNAK, DGLDAASYYAPVR, GTFIIDPAAVIR, ADVTPADFSEWSK
AUC
Warning: Removed 151 rows containing missing values (`geom_point()`).
Warning: Removed 5 rows containing missing values (`geom_line()`).
input timeRange: 7776000 | timeMin: 2023-10-27 10:25:10.703 | timeMax: 2023-11-17 10:25:10.704 | timeDiff: 1814400.00099993
autoQC01 module APEX long nrow: 1254
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, YILAGVENSK, GAGSSEPVTGLDAK, TPVITGAPYEYR, VEATFGVDESNAK, DGLDAASYYAPVR, GTFIIDPAAVIR, ADVTPADFSEWSK
AUC
Warning: Removed 98 rows containing missing values (`geom_point()`).
Warning: Removed 18 rows containing missing values (`geom_line()`).
input timeRange: 7776000 | timeMin: 2023-10-16 10:25:10.708 | timeMax: 2023-11-17 10:25:10.704 | timeDiff: 2764799.99600005
autoQC01 module APEX long nrow: 1848
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, YILAGVENSK, GAGSSEPVTGLDAK, TPVITGAPYEYR, VEATFGVDESNAK, DGLDAASYYAPVR, GTFIIDPAAVIR, ADVTPADFSEWSK
AUC
Warning: Removed 151 rows containing missing values (`geom_point()`).
Warning: Removed 5 rows containing missing values (`geom_line()`).
input timeRange: 7776000 | timeMin: 2023-10-27 10:25:10.703 | timeMax: 2023-11-17 10:25:10.704 | timeDiff: 1814400.00099993
autoQC01 module APEX long nrow: 1254
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, YILAGVENSK, GAGSSEPVTGLDAK, TPVITGAPYEYR, VEATFGVDESNAK, DGLDAASYYAPVR, GTFIIDPAAVIR, ADVTPADFSEWSK
AUC
Warning: Removed 98 rows containing missing values (`geom_point()`).
Warning: Removed 18 rows containing missing values (`geom_line()`).
input timeRange: 7776000 | timeMin: 2023-10-16 10:25:10.708 | timeMax: 2023-11-17 10:25:10.704 | timeDiff: 2764799.99600005
autoQC01 module APEX long nrow: 1848
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, YILAGVENSK, GAGSSEPVTGLDAK, TPVITGAPYEYR, VEATFGVDESNAK, DGLDAASYYAPVR, GTFIIDPAAVIR, ADVTPADFSEWSK
AUC
Warning: Removed 151 rows containing missing values (`geom_point()`).
Warning: Removed 5 rows containing missing values (`geom_line()`).
input timeRange: 7776000 | timeMin: 2023-10-27 10:25:10.703 | timeMax: 2023-11-17 10:25:10.704 | timeDiff: 1814400.00099993
autoQC01 module APEX long nrow: 1254
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, YILAGVENSK, GAGSSEPVTGLDAK, TPVITGAPYEYR, VEATFGVDESNAK, DGLDAASYYAPVR, GTFIIDPAAVIR, ADVTPADFSEWSK
AUC
Warning: Removed 98 rows containing missing values (`geom_point()`).
Warning: Removed 18 rows containing missing values (`geom_line()`).
input timeRange: 7776000 | timeMin: 2023-10-16 10:25:10.708 | timeMax: 2023-11-17 10:25:10.704 | timeDiff: 2764799.99600005
autoQC01 module APEX long nrow: 1848
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, YILAGVENSK, GAGSSEPVTGLDAK, TPVITGAPYEYR, VEATFGVDESNAK, DGLDAASYYAPVR, GTFIIDPAAVIR, ADVTPADFSEWSK
AUC
Warning: Removed 151 rows containing missing values (`geom_point()`).
Warning: Removed 5 rows containing missing values (`geom_line()`).
input timeRange: 7776000 | timeMin: 2023-10-27 10:25:10.703 | timeMax: 2023-11-17 10:25:10.704 | timeDiff: 1814400.00099993
autoQC01 module APEX long nrow: 1254
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, YILAGVENSK, GAGSSEPVTGLDAK, TPVITGAPYEYR, VEATFGVDESNAK, DGLDAASYYAPVR, GTFIIDPAAVIR, ADVTPADFSEWSK
AUC
Warning: Removed 98 rows containing missing values (`geom_point()`).
Warning: Removed 18 rows containing missing values (`geom_line()`).
input timeRange: 7776000 | timeMin: 2023-10-16 10:25:10.708 | timeMax: 2023-11-17 10:25:10.704 | timeDiff: 2764799.99600005
autoQC01 module APEX long nrow: 1848
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, YILAGVENSK, GAGSSEPVTGLDAK, TPVITGAPYEYR, VEATFGVDESNAK, DGLDAASYYAPVR, GTFIIDPAAVIR, ADVTPADFSEWSK
AUC
Warning: Removed 151 rows containing missing values (`geom_point()`).
Warning: Removed 5 rows containing missing values (`geom_line()`).
input timeRange: 7776000 | timeMin: 2023-10-27 10:25:10.703 | timeMax: 2023-11-17 10:25:10.704 | timeDiff: 1814400.00099993
autoQC01 module APEX long nrow: 1254
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, YILAGVENSK, GAGSSEPVTGLDAK, TPVITGAPYEYR, VEATFGVDESNAK, DGLDAASYYAPVR, GTFIIDPAAVIR, ADVTPADFSEWSK
AUC
Warning: Removed 98 rows containing missing values (`geom_point()`).
Warning: Removed 18 rows containing missing values (`geom_line()`).
input timeRange: 7776000 | timeMin: 2023-10-16 10:25:10.708 | timeMax: 2023-11-17 10:25:10.704 | timeDiff: 2764799.99600005
autoQC01 module APEX long nrow: 1848
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, YILAGVENSK, GAGSSEPVTGLDAK, TPVITGAPYEYR, VEATFGVDESNAK, DGLDAASYYAPVR, GTFIIDPAAVIR, ADVTPADFSEWSK
AUC
Warning: Removed 151 rows containing missing values (`geom_point()`).
Warning: Removed 5 rows containing missing values (`geom_line()`).
input timeRange: 7776000 | timeMin: 2023-10-27 10:25:10.703 | timeMax: 2023-11-17 10:25:10.704 | timeDiff: 1814400.00099993
autoQC01 module APEX long nrow: 1254
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, YILAGVENSK, GAGSSEPVTGLDAK, TPVITGAPYEYR, VEATFGVDESNAK, DGLDAASYYAPVR, GTFIIDPAAVIR, ADVTPADFSEWSK
AUC
Warning: Removed 98 rows containing missing values (`geom_point()`).
Warning: Removed 18 rows containing missing values (`geom_line()`).
input timeRange: 7776000 | timeMin: 2023-10-16 10:25:10.708 | timeMax: 2023-11-17 10:25:10.704 | timeDiff: 2764799.99600005
autoQC01 module APEX long nrow: 1848
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, YILAGVENSK, GAGSSEPVTGLDAK, TPVITGAPYEYR, VEATFGVDESNAK, DGLDAASYYAPVR, GTFIIDPAAVIR, ADVTPADFSEWSK
AUC
Warning: Removed 151 rows containing missing values (`geom_point()`).
Warning: Removed 5 rows containing missing values (`geom_line()`).
input timeRange: 7776000 | timeMin: 2023-10-27 10:25:10.703 | timeMax: 2023-11-17 10:25:10.704 | timeDiff: 1814400.00099993
autoQC01 module APEX long nrow: 1254
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, YILAGVENSK, GAGSSEPVTGLDAK, TPVITGAPYEYR, VEATFGVDESNAK, DGLDAASYYAPVR, GTFIIDPAAVIR, ADVTPADFSEWSK
AUC
Warning: Removed 98 rows containing missing values (`geom_point()`).
Warning: Removed 18 rows containing missing values (`geom_line()`).
input timeRange: 7776000 | timeMin: 2023-10-16 10:25:10.708 | timeMax: 2023-11-17 10:25:10.704 | timeDiff: 2764799.99600005
autoQC01 module APEX long nrow: 1848
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, YILAGVENSK, GAGSSEPVTGLDAK, TPVITGAPYEYR, VEATFGVDESNAK, DGLDAASYYAPVR, GTFIIDPAAVIR, ADVTPADFSEWSK
AUC
Warning: Removed 151 rows containing missing values (`geom_point()`).
Warning: Removed 5 rows containing missing values (`geom_line()`).
input timeRange: 7776000 | timeMin: 2023-10-27 10:25:10.703 | timeMax: 2023-11-17 10:25:10.704 | timeDiff: 1814400.00099993
autoQC01 module APEX long nrow: 1254
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, YILAGVENSK, GAGSSEPVTGLDAK, TPVITGAPYEYR, VEATFGVDESNAK, DGLDAASYYAPVR, GTFIIDPAAVIR, ADVTPADFSEWSK
AUC
Warning: Removed 98 rows containing missing values (`geom_point()`).
Warning: Removed 18 rows containing missing values (`geom_line()`).
input timeRange: 7776000 | timeMin: 2023-10-16 10:25:10.708 | timeMax: 2023-11-17 10:25:10.704 | timeDiff: 2764799.99600005
autoQC01 module APEX long nrow: 1848
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, YILAGVENSK, GAGSSEPVTGLDAK, TPVITGAPYEYR, VEATFGVDESNAK, DGLDAASYYAPVR, GTFIIDPAAVIR, ADVTPADFSEWSK
AUC
Warning: Removed 151 rows containing missing values (`geom_point()`).
Warning: Removed 5 rows containing missing values (`geom_line()`).
input timeRange: 7776000 | timeMin: 2023-10-27 10:25:10.703 | timeMax: 2023-11-17 10:25:10.704 | timeDiff: 1814400.00099993
autoQC01 module APEX long nrow: 1254
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, YILAGVENSK, GAGSSEPVTGLDAK, TPVITGAPYEYR, VEATFGVDESNAK, DGLDAASYYAPVR, GTFIIDPAAVIR, ADVTPADFSEWSK
AUC
Warning: Removed 98 rows containing missing values (`geom_point()`).
Warning: Removed 18 rows containing missing values (`geom_line()`).
input timeRange: 7776000 | timeMin: 2023-10-16 10:25:10.708 | timeMax: 2023-11-17 10:25:10.704 | timeDiff: 2764799.99600005
autoQC01 module APEX long nrow: 1848
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, YILAGVENSK, GAGSSEPVTGLDAK, TPVITGAPYEYR, VEATFGVDESNAK, DGLDAASYYAPVR, GTFIIDPAAVIR, ADVTPADFSEWSK
AUC
Warning: Removed 151 rows containing missing values (`geom_point()`).
Warning: Removed 5 rows containing missing values (`geom_line()`).
input timeRange: 7776000 | timeMin: 2023-10-27 10:25:10.703 | timeMax: 2023-11-17 10:25:10.704 | timeDiff: 1814400.00099993
autoQC01 module APEX long nrow: 1254
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, YILAGVENSK, GAGSSEPVTGLDAK, TPVITGAPYEYR, VEATFGVDESNAK, DGLDAASYYAPVR, GTFIIDPAAVIR, ADVTPADFSEWSK
AUC
Warning: Removed 98 rows containing missing values (`geom_point()`).
Warning: Removed 18 rows containing missing values (`geom_line()`).
input timeRange: 7776000 | timeMin: 2023-10-16 10:25:10.708 | timeMax: 2023-11-17 10:25:10.704 | timeDiff: 2764799.99600005
autoQC01 module APEX long nrow: 1848
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, YILAGVENSK, GAGSSEPVTGLDAK, TPVITGAPYEYR, VEATFGVDESNAK, DGLDAASYYAPVR, GTFIIDPAAVIR, ADVTPADFSEWSK
AUC
Warning: Removed 151 rows containing missing values (`geom_point()`).
Warning: Removed 5 rows containing missing values (`geom_line()`).
input timeRange: 7776000 | timeMin: 2023-10-27 10:25:10.703 | timeMax: 2023-11-17 10:25:10.704 | timeDiff: 1814400.00099993
autoQC01 module APEX long nrow: 1254
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, YILAGVENSK, GAGSSEPVTGLDAK, TPVITGAPYEYR, VEATFGVDESNAK, DGLDAASYYAPVR, GTFIIDPAAVIR, ADVTPADFSEWSK
AUC
Warning: Removed 98 rows containing missing values (`geom_point()`).
Warning: Removed 18 rows containing missing values (`geom_line()`).
input timeRange: 7776000 | timeMin: 2023-10-16 10:25:10.708 | timeMax: 2023-11-17 10:25:10.704 | timeDiff: 2764799.99600005
autoQC01 module APEX long nrow: 1848
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, YILAGVENSK, GAGSSEPVTGLDAK, TPVITGAPYEYR, VEATFGVDESNAK, DGLDAASYYAPVR, GTFIIDPAAVIR, ADVTPADFSEWSK
AUC
Warning: Removed 151 rows containing missing values (`geom_point()`).
Warning: Removed 5 rows containing missing values (`geom_line()`).
input timeRange: 7776000 | timeMin: 2023-10-27 10:25:10.703 | timeMax: 2023-11-17 10:25:10.704 | timeDiff: 1814400.00099993
autoQC01 module APEX long nrow: 1254
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, YILAGVENSK, GAGSSEPVTGLDAK, TPVITGAPYEYR, VEATFGVDESNAK, DGLDAASYYAPVR, GTFIIDPAAVIR, ADVTPADFSEWSK
AUC
Warning: Removed 98 rows containing missing values (`geom_point()`).
Warning: Removed 18 rows containing missing values (`geom_line()`).
input timeRange: 7776000 | timeMin: 2023-10-16 10:25:10.708 | timeMax: 2023-11-17 10:25:10.704 | timeDiff: 2764799.99600005
autoQC01 module APEX long nrow: 1848
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, YILAGVENSK, GAGSSEPVTGLDAK, TPVITGAPYEYR, VEATFGVDESNAK, DGLDAASYYAPVR, GTFIIDPAAVIR, ADVTPADFSEWSK
AUC
Warning: Removed 151 rows containing missing values (`geom_point()`).
Warning: Removed 5 rows containing missing values (`geom_line()`).
input timeRange: 7776000 | timeMin: 2023-10-27 10:25:10.703 | timeMax: 2023-11-17 10:25:10.704 | timeDiff: 1814400.00099993
autoQC01 module APEX long nrow: 1254
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, YILAGVENSK, GAGSSEPVTGLDAK, TPVITGAPYEYR, VEATFGVDESNAK, DGLDAASYYAPVR, GTFIIDPAAVIR, ADVTPADFSEWSK
AUC
Warning: Removed 98 rows containing missing values (`geom_point()`).
Warning: Removed 18 rows containing missing values (`geom_line()`).
input timeRange: 7776000 | timeMin: 2023-10-16 10:25:10.708 | timeMax: 2023-11-17 10:25:10.704 | timeDiff: 2764799.99600005
autoQC01 module APEX long nrow: 1848
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, YILAGVENSK, GAGSSEPVTGLDAK, TPVITGAPYEYR, VEATFGVDESNAK, DGLDAASYYAPVR, GTFIIDPAAVIR, ADVTPADFSEWSK
AUC
Warning: Removed 151 rows containing missing values (`geom_point()`).
Warning: Removed 5 rows containing missing values (`geom_line()`).
input timeRange: 7776000 | timeMin: 2023-10-27 10:25:10.703 | timeMax: 2023-11-17 10:25:10.704 | timeDiff: 1814400.00099993
autoQC01 module APEX long nrow: 1254
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, YILAGVENSK, GAGSSEPVTGLDAK, TPVITGAPYEYR, VEATFGVDESNAK, DGLDAASYYAPVR, GTFIIDPAAVIR, ADVTPADFSEWSK
AUC
Warning: Removed 98 rows containing missing values (`geom_point()`).
Warning: Removed 18 rows containing missing values (`geom_line()`).
input timeRange: 7776000 | timeMin: 2023-10-16 10:25:10.708 | timeMax: 2023-11-17 10:25:10.704 | timeDiff: 2764799.99600005
autoQC01 module APEX long nrow: 1848
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, YILAGVENSK, GAGSSEPVTGLDAK, TPVITGAPYEYR, VEATFGVDESNAK, DGLDAASYYAPVR, GTFIIDPAAVIR, ADVTPADFSEWSK
AUC
Warning: Removed 151 rows containing missing values (`geom_point()`).
Warning: Removed 5 rows containing missing values (`geom_line()`).
input timeRange: 7776000 | timeMin: 2023-10-27 12:25:52.502745 | timeMax: 2023-11-17 11:25:52.503374 | timeDiff: 1814400.00062847
autoQC01 module APEX wide nrow: 244574
autoQC01 module APEX long nrow: 342
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUC
Warning: Removed 30 rows containing missing values (`geom_point()`).
Warning: Removed 3 rows containing missing values (`geom_line()`).
input timeRange: 7776000 | timeMin: 2023-10-27 10:25:52.503 | timeMax: 2023-11-17 10:25:52.503 | timeDiff: 1814400
autoQC01 module APEX long nrow: 456
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, YILAGVENSK
AUC
Warning: Removed 34 rows containing missing values (`geom_point()`).
Warning: Removed 5 rows containing missing values (`geom_line()`).
autoQC01 module APEX long nrow: 570
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, YILAGVENSK, GTFIIDPGGVIR
AUC
Warning: Removed 41 rows containing missing values (`geom_point()`).
Warning: Removed 7 rows containing missing values (`geom_line()`).
autoQC01 module APEX long nrow: 684
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, YILAGVENSK, GTFIIDPGGVIR, GAGSSEPVTGLDAK
AUC
Warning: Removed 53 rows containing missing values (`geom_point()`).
Warning: Removed 9 rows containing missing values (`geom_line()`).
autoQC01 module APEX long nrow: 798
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, YILAGVENSK, GTFIIDPGGVIR, GAGSSEPVTGLDAK, VEATFGVDESNAK
AUC
Warning: Removed 63 rows containing missing values (`geom_point()`).
Warning: Removed 10 rows containing missing values (`geom_line()`).
autoQC01 module APEX long nrow: 912
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, YILAGVENSK, GTFIIDPGGVIR, GAGSSEPVTGLDAK, VEATFGVDESNAK, GTFIIDPAAVIR
AUC
Warning: Removed 77 rows containing missing values (`geom_point()`).
Warning: Removed 12 rows containing missing values (`geom_line()`).
autoQC01 module APEX long nrow: 1026
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, YILAGVENSK, GTFIIDPGGVIR, GAGSSEPVTGLDAK, VEATFGVDESNAK, GTFIIDPAAVIR, TPVITGAPYEYR
AUC
Warning: Removed 88 rows containing missing values (`geom_point()`).
Warning: Removed 16 rows containing missing values (`geom_line()`).
autoQC01 module APEX long nrow: 1140
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, YILAGVENSK, GTFIIDPGGVIR, GAGSSEPVTGLDAK, VEATFGVDESNAK, GTFIIDPAAVIR, TPVITGAPYEYR, DGLDAASYYAPVR
AUC
Warning: Removed 94 rows containing missing values (`geom_point()`).
Warning: Removed 17 rows containing missing values (`geom_line()`).
autoQC01 module APEX long nrow: 1254
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, YILAGVENSK, GTFIIDPGGVIR, GAGSSEPVTGLDAK, VEATFGVDESNAK, GTFIIDPAAVIR, TPVITGAPYEYR, DGLDAASYYAPVR, ADVTPADFSEWSK
AUC
Warning: Removed 98 rows containing missing values (`geom_point()`).
Warning: Removed 18 rows containing missing values (`geom_line()`).
plot_click: p33038/Proteomics/EXPLORIS_2/analytic_20231103_prot/20231103_C33038_001_autoQC01.raw | plot_click: p33038/Proteomics/EXPLORIS_2/analytic_20231103_phos/20231103_C33038_038_autoQC01.raw | plot_click: p33038/Proteomics/EXPLORIS_2/analytic_20231103_phos/20231103_C33038_038_autoQC01.raw
plot_click: p33038/Proteomics/EXPLORIS_2/analytic_20231103_prot/20231103_C33038_001_autoQC01.raw | plot_click: p33038/Proteomics/EXPLORIS_2/analytic_20231103_phos/20231103_C33038_038_autoQC01.raw | plot_click: p33038/Proteomics/EXPLORIS_2/analytic_20231103_phos/20231103_C33038_038_autoQC01.raw
fn has changed to /srv/www/htdocs//p33038/Proteomics/EXPLORIS_2/analytic_20231103_prot/20231103_C33038_001_autoQC01.raw
Reading raw file: /srv/www/htdocs//p33038/Proteomics/EXPLORIS_2/analytic_20231103_prot/20231103_C33038_001_autoQC01.raw
length = 11
Plotting chromatograms ...
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
plot_click: 
plot_click: 
fn has changed to /srv/www/htdocs//NA
plot_click: p33038/Proteomics/EXPLORIS_2/analytic_20231103_prot/20231103_C33038_001_autoQC01.raw
plot_click: p33038/Proteomics/EXPLORIS_2/analytic_20231103_prot/20231103_C33038_001_autoQC01.raw
fn has changed to /srv/www/htdocs//p33038/Proteomics/EXPLORIS_2/analytic_20231103_prot/20231103_C33038_001_autoQC01.raw
Reading raw file: /srv/www/htdocs//p33038/Proteomics/EXPLORIS_2/analytic_20231103_prot/20231103_C33038_001_autoQC01.raw
length = 11
Plotting chromatograms ...
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
plot_click: p33314/Proteomics/EXPLORIS_2/analytic_20231107/20231107_C33314_018_autoQC01.raw
plot_click: p33314/Proteomics/EXPLORIS_2/analytic_20231107/20231107_C33314_018_autoQC01.raw
fn has changed to /srv/www/htdocs//p33314/Proteomics/EXPLORIS_2/analytic_20231107/20231107_C33314_018_autoQC01.raw
Reading raw file: /srv/www/htdocs//p33314/Proteomics/EXPLORIS_2/analytic_20231107/20231107_C33314_018_autoQC01.raw
length = 11
Plotting chromatograms ...
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
Warning: Using `size` aesthetic for lines was deprecated in ggplot2 3.4.0.
ℹ Please use `linewidth` instead.
Warning: Removed 98 rows containing missing values (`geom_point()`).
Warning: Removed 18 rows containing missing values (`geom_line()`).
autoQC01 module APEX long nrow: 1089
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, YILAGVENSK, GTFIIDPGGVIR, GAGSSEPVTGLDAK, VEATFGVDESNAK, GTFIIDPAAVIR, TPVITGAPYEYR, DGLDAASYYAPVR, ADVTPADFSEWSK
AUC
Warning: Removed 16 rows containing missing values (`geom_point()`).
Warning: Removed 1 row containing missing values (`geom_line()`).
autoQC01 module APEX long nrow: 825
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, YILAGVENSK, GTFIIDPGGVIR, GAGSSEPVTGLDAK, VEATFGVDESNAK, GTFIIDPAAVIR, TPVITGAPYEYR, DGLDAASYYAPVR, ADVTPADFSEWSK
AUC
Warning: Removed 17 rows containing missing values (`geom_point()`).
Warning: Removed 5 rows containing missing values (`geom_line()`).
autoQC01 module APEX long nrow: 1089
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, YILAGVENSK, GTFIIDPGGVIR, GAGSSEPVTGLDAK, VEATFGVDESNAK, GTFIIDPAAVIR, TPVITGAPYEYR, DGLDAASYYAPVR, ADVTPADFSEWSK
AUC
Warning: Removed 10 rows containing missing values (`geom_point()`).
Warning: Removed 1 row containing missing values (`geom_line()`).
plot_click: 
plot_click: 
fn has changed to /srv/www/htdocs//NA
plot_click: p3000/Proteomics/QEXACTIVE_1/analytic_20231114/20231114_C3000_003_autoQC01.raw
plot_click: p3000/Proteomics/QEXACTIVE_1/analytic_20231114/20231114_C3000_003_autoQC01.raw
fn has changed to /srv/www/htdocs//p3000/Proteomics/QEXACTIVE_1/analytic_20231114/20231114_C3000_003_autoQC01.raw
Reading raw file: /srv/www/htdocs//p3000/Proteomics/QEXACTIVE_1/analytic_20231114/20231114_C3000_003_autoQC01.raw
length = 11
Plotting chromatograms ...
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
plot_click: p3000/Proteomics/QEXACTIVE_1/analytic_20231114/20231114_C3000_003_autoQC01.raw
plot_click: p3000/Proteomics/QEXACTIVE_1/analytic_20231114/20231114_C3000_003_autoQC01.raw
plot_click: p33171/Proteomics/QEXACTIVE_1/analytic_20231110/20231110_C33171_010_autoQC01.raw
plot_click: p33171/Proteomics/QEXACTIVE_1/analytic_20231110/20231110_C33171_010_autoQC01.raw
fn has changed to /srv/www/htdocs//p33171/Proteomics/QEXACTIVE_1/analytic_20231110/20231110_C33171_010_autoQC01.raw
Reading raw file: /srv/www/htdocs//p33171/Proteomics/QEXACTIVE_1/analytic_20231110/20231110_C33171_010_autoQC01.raw
length = 11
Plotting chromatograms ...
plot_click: p33171/Proteomics/QEXACTIVE_1/analytic_20231110/20231110_C33171_010_autoQC01.raw
plot_click: p33171/Proteomics/QEXACTIVE_1/analytic_20231110/20231110_C33171_010_autoQC01.raw
plot_click: p3000/Proteomics/QEXACTIVE_1/analytic_20231114/20231114_C3000_003_autoQC01.raw
plot_click: p3000/Proteomics/QEXACTIVE_1/analytic_20231114/20231114_C3000_003_autoQC01.raw
fn has changed to /srv/www/htdocs//p3000/Proteomics/QEXACTIVE_1/analytic_20231114/20231114_C3000_003_autoQC01.raw
Reading raw file: /srv/www/htdocs//p3000/Proteomics/QEXACTIVE_1/analytic_20231114/20231114_C3000_003_autoQC01.raw
length = 11
Plotting chromatograms ...
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
Warning: Removed 10 rows containing missing values (`geom_point()`).
Warning: Removed 1 row containing missing values (`geom_line()`).
Warning: Removed 10 rows containing missing values (`geom_point()`).
Warning: Removed 1 row containing missing values (`geom_line()`).
Warning: Removed 10 rows containing missing values (`geom_point()`).
Warning: Removed 1 row containing missing values (`geom_line()`).
Warning: Removed 10 rows containing missing values (`geom_point()`).
Warning: Removed 1 row containing missing values (`geom_line()`).
plot_click: p33297/Proteomics/QEXACTIVE_1/analytic_20231107/20231107_C33297_005_autoQC01.raw
plot_click: p33297/Proteomics/QEXACTIVE_1/analytic_20231107/20231107_C33297_005_autoQC01.raw
fn has changed to /srv/www/htdocs//p33297/Proteomics/QEXACTIVE_1/analytic_20231107/20231107_C33297_005_autoQC01.raw
Reading raw file: /srv/www/htdocs//p33297/Proteomics/QEXACTIVE_1/analytic_20231107/20231107_C33297_005_autoQC01.raw
length = 11
Plotting chromatograms ...
plot_click: p3000/Proteomics/QEXACTIVE_1/analytic_20231114/20231114_C3000_003_autoQC01.raw
plot_click: p3000/Proteomics/QEXACTIVE_1/analytic_20231114/20231114_C3000_003_autoQC01.raw
fn has changed to /srv/www/htdocs//p3000/Proteomics/QEXACTIVE_1/analytic_20231114/20231114_C3000_003_autoQC01.raw
Reading raw file: /srv/www/htdocs//p3000/Proteomics/QEXACTIVE_1/analytic_20231114/20231114_C3000_003_autoQC01.raw
length = 11
Plotting chromatograms ...
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
input timeRange: 7776000 | timeMin: 2023-10-27 12:32:12.766182 | timeMax: 2023-11-17 11:32:12.766842 | timeDiff: 1814400.00065947
autoQC01 module APEX wide nrow: 244574
autoQC01 module APEX long nrow: 342
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUC
Warning: Removed 30 rows containing missing values (`geom_point()`).
Warning: Removed 3 rows containing missing values (`geom_line()`).
input timeRange: 7776000 | timeMin: 2023-10-27 10:32:12.766 | timeMax: 2023-11-17 10:32:12.767 | timeDiff: 1814400.00099993
plot_click: 
plot_click: 
fn has changed to /srv/www/htdocs//NA
plot_click: 
plot_click: 
plot_click: p3000/Proteomics/EXPLORIS_2/analytic_20231106/20231106_002_autoQC01.raw | plot_click: p3000/Proteomics/EXPLORIS_2/analytic_20231106/20231106_004_autoQC01.raw
plot_click: p3000/Proteomics/EXPLORIS_2/analytic_20231106/20231106_002_autoQC01.raw | plot_click: p3000/Proteomics/EXPLORIS_2/analytic_20231106/20231106_004_autoQC01.raw
fn has changed to /srv/www/htdocs//p3000/Proteomics/EXPLORIS_2/analytic_20231106/20231106_002_autoQC01.raw
Reading raw file: /srv/www/htdocs//p3000/Proteomics/EXPLORIS_2/analytic_20231106/20231106_002_autoQC01.raw
length = 3
Plotting chromatograms ...
autoQC01 module APEX long nrow: 456
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, ADVTPADFSEWSK
AUC
Warning: Removed 34 rows containing missing values (`geom_point()`).
Warning: Removed 4 rows containing missing values (`geom_line()`).
plot_click: p3000/Proteomics/EXPLORIS_2/analytic_20231106/20231106_002_autoQC01.raw | plot_click: p3000/Proteomics/EXPLORIS_2/analytic_20231106/20231106_004_autoQC01.raw
Reading raw file: /srv/www/htdocs//p3000/Proteomics/EXPLORIS_2/analytic_20231106/20231106_002_autoQC01.raw
length = 4
Plotting chromatograms ...
plot_click: p33356/Proteomics/EXPLORIS_2/analytic_20231110/20231110_C33356_001_autoQC01.raw
plot_click: p33356/Proteomics/EXPLORIS_2/analytic_20231110/20231110_C33356_001_autoQC01.raw
fn has changed to /srv/www/htdocs//p33356/Proteomics/EXPLORIS_2/analytic_20231110/20231110_C33356_001_autoQC01.raw
Reading raw file: /srv/www/htdocs//p33356/Proteomics/EXPLORIS_2/analytic_20231110/20231110_C33356_001_autoQC01.raw
length = 4
Plotting chromatograms ...
input timeRange: 7776000 | timeMin: 2023-08-27 10:32:16.174 | timeMax: 2023-11-17 10:32:12.767 | timeDiff: 7084796.59299994
autoQC01 module APEX long nrow: 1872
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, ADVTPADFSEWSK
AUC
Warning: Removed 87 rows containing missing values (`geom_point()`).
Warning: Removed 2 rows containing missing values (`geom_line()`).
plot_click: p33356/Proteomics/EXPLORIS_2/analytic_20231110/20231110_C33356_001_autoQC01.raw
autoQC01 module APEX long nrow: 1752
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, ADVTPADFSEWSK
AUC
Warning: Removed 25 rows containing missing values (`geom_point()`).
Warning: Removed 2 rows containing missing values (`geom_line()`).
autoQC01 module APEX long nrow: 1536
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, ADVTPADFSEWSK
AUC
Warning: Removed 106 rows containing missing values (`geom_point()`).
autoQC01 module APEX long nrow: 1284
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, ADVTPADFSEWSK
AUC
Warning: Removed 55 rows containing missing values (`geom_point()`).
Warning: Removed 4 rows containing missing values (`geom_line()`).
autoQC01 module APEX long nrow: 1356
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, ADVTPADFSEWSK
AUC
Warning: Removed 37 rows containing missing values (`geom_point()`).
Warning: Removed 1 row containing missing values (`geom_line()`).
autoQC01 module APEX long nrow: 1536
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, ADVTPADFSEWSK
AUC
Warning: Removed 106 rows containing missing values (`geom_point()`).
autoQC01 module APEX long nrow: 1152
LGGNEQVTR, TPVISGGPYEYR, ADVTPADFSEWSK
AUC
Warning: Removed 68 rows containing missing values (`geom_point()`).
Reading raw file: /srv/www/htdocs//p33356/Proteomics/EXPLORIS_2/analytic_20231110/20231110_C33356_001_autoQC01.raw
length = 3
Plotting chromatograms ...
plot_click: 
plot_click: 
fn has changed to /srv/www/htdocs//NA
plot_click: p32963/Proteomics/LUMOS_2/analytic_20231010/20231010_C32963_001a_autoQC01.raw
plot_click: p32963/Proteomics/LUMOS_2/analytic_20231010/20231010_C32963_001a_autoQC01.raw
fn has changed to /srv/www/htdocs//p32963/Proteomics/LUMOS_2/analytic_20231010/20231010_C32963_001a_autoQC01.raw
Reading raw file: /srv/www/htdocs//p32963/Proteomics/LUMOS_2/analytic_20231010/20231010_C32963_001a_autoQC01.raw
length = 3
Plotting chromatograms ...
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
autoQC01 module APEX long nrow: 1314
LGGNEQVTR, TPVISGGPYEYR, ADVTPADFSEWSK
AUC
Warning: Removed 8 rows containing missing values (`geom_point()`).
Warning: Removed 1 row containing missing values (`geom_line()`).
plot_click: 
plot_click: p23777/Proteomics/EXPLORIS_1/noheld_20231011/20231011_013_autoQC01_20231012120910.raw
plot_click: p23777/Proteomics/EXPLORIS_1/noheld_20231011/20231011_013_autoQC01_20231012120910.raw
fn has changed to /srv/www/htdocs//p23777/Proteomics/EXPLORIS_1/noheld_20231011/20231011_013_autoQC01_20231012120910.raw
Reading raw file: /srv/www/htdocs//p23777/Proteomics/EXPLORIS_1/noheld_20231011/20231011_013_autoQC01_20231012120910.raw
length = 3
Plotting chromatograms ...
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
plot_click: 
plot_click: 
fn has changed to /srv/www/htdocs//NA
plot_click: p30240/Proteomics/EXPLORIS_1/gomal_20230831/20230831_056_autoQC01.raw | plot_click: p30240/Proteomics/EXPLORIS_1/gomal_20230831/20230831_061_autoQC01.raw | plot_click: p30240/Proteomics/EXPLORIS_1/gomal_20230831/20230831_056_autoQC01.raw
plot_click: p30240/Proteomics/EXPLORIS_1/gomal_20230831/20230831_056_autoQC01.raw | plot_click: p30240/Proteomics/EXPLORIS_1/gomal_20230831/20230831_061_autoQC01.raw | plot_click: p30240/Proteomics/EXPLORIS_1/gomal_20230831/20230831_056_autoQC01.raw
fn has changed to /srv/www/htdocs//p30240/Proteomics/EXPLORIS_1/gomal_20230831/20230831_056_autoQC01.raw
Reading raw file: /srv/www/htdocs//p30240/Proteomics/EXPLORIS_1/gomal_20230831/20230831_056_autoQC01.raw
length = 3
Plotting chromatograms ...
plot_click: p30646/Proteomics/EXPLORIS_1/gnarduzzi_20231113/20231113_009_autoQC01.raw
plot_click: p30646/Proteomics/EXPLORIS_1/gnarduzzi_20231113/20231113_009_autoQC01.raw
fn has changed to /srv/www/htdocs//p30646/Proteomics/EXPLORIS_1/gnarduzzi_20231113/20231113_009_autoQC01.raw
Reading raw file: /srv/www/htdocs//p30646/Proteomics/EXPLORIS_1/gnarduzzi_20231113/20231113_009_autoQC01.raw
length = 3
Plotting chromatograms ...
plot_click: p30646/Proteomics/EXPLORIS_1/gnarduzzi_20231113/20231113_001_autoQC01.raw | plot_click: p30646/Proteomics/EXPLORIS_1/gnarduzzi_20231113/20231113_001_autoQC01.raw | plot_click: p30646/Proteomics/EXPLORIS_1/gnarduzzi_20231113/20231113_001_autoQC01.raw
plot_click: p30646/Proteomics/EXPLORIS_1/gnarduzzi_20231113/20231113_001_autoQC01.raw | plot_click: p30646/Proteomics/EXPLORIS_1/gnarduzzi_20231113/20231113_001_autoQC01.raw | plot_click: p30646/Proteomics/EXPLORIS_1/gnarduzzi_20231113/20231113_001_autoQC01.raw
fn has changed to /srv/www/htdocs//p30646/Proteomics/EXPLORIS_1/gnarduzzi_20231113/20231113_001_autoQC01.raw
Reading raw file: /srv/www/htdocs//p30646/Proteomics/EXPLORIS_1/gnarduzzi_20231113/20231113_001_autoQC01.raw
length = 3
Plotting chromatograms ...
plot_click: p30240/Proteomics/EXPLORIS_1/gomal_20231030_diluted/20231030_019_autoQC01.raw
plot_click: p30240/Proteomics/EXPLORIS_1/gomal_20231030_diluted/20231030_019_autoQC01.raw
fn has changed to /srv/www/htdocs//p30240/Proteomics/EXPLORIS_1/gomal_20231030_diluted/20231030_019_autoQC01.raw
Reading raw file: /srv/www/htdocs//p30240/Proteomics/EXPLORIS_1/gomal_20231030_diluted/20231030_019_autoQC01.raw
length = 3
Plotting chromatograms ...
autoQC01 module APEX long nrow: 1404
LGGNEQVTR, TPVISGGPYEYR, ADVTPADFSEWSK
AUC
Warning: Removed 50 rows containing missing values (`geom_point()`).
Warning: Removed 2 rows containing missing values (`geom_line()`).
plot_click: 
plot_click: p3000/Proteomics/EXPLORIS_2/analytic_20231113/20231113_004_autoQC01.raw
plot_click: p3000/Proteomics/EXPLORIS_2/analytic_20231113/20231113_004_autoQC01.raw
fn has changed to /srv/www/htdocs//p3000/Proteomics/EXPLORIS_2/analytic_20231113/20231113_004_autoQC01.raw
Reading raw file: /srv/www/htdocs//p3000/Proteomics/EXPLORIS_2/analytic_20231113/20231113_004_autoQC01.raw
length = 3
Plotting chromatograms ...
plot_click: p33164/Proteomics/EXPLORIS_2/analytic_20231026/20231026_C33164_049_autoQC01.raw | plot_click: p33256/Proteomics/EXPLORIS_2/analytic_20231101/20231101_C33256_001_autoQC01.raw
plot_click: p33164/Proteomics/EXPLORIS_2/analytic_20231026/20231026_C33164_049_autoQC01.raw | plot_click: p33256/Proteomics/EXPLORIS_2/analytic_20231101/20231101_C33256_001_autoQC01.raw
fn has changed to /srv/www/htdocs//p33164/Proteomics/EXPLORIS_2/analytic_20231026/20231026_C33164_049_autoQC01.raw
Reading raw file: /srv/www/htdocs//p33164/Proteomics/EXPLORIS_2/analytic_20231026/20231026_C33164_049_autoQC01.raw
length = 3
Plotting chromatograms ...
plot_click: p33314/Proteomics/EXPLORIS_2/analytic_20231107/20231107_C33314_018_autoQC01.raw
plot_click: p33314/Proteomics/EXPLORIS_2/analytic_20231107/20231107_C33314_018_autoQC01.raw
fn has changed to /srv/www/htdocs//p33314/Proteomics/EXPLORIS_2/analytic_20231107/20231107_C33314_018_autoQC01.raw
Reading raw file: /srv/www/htdocs//p33314/Proteomics/EXPLORIS_2/analytic_20231107/20231107_C33314_018_autoQC01.raw
length = 3
Plotting chromatograms ...
plot_click: p33164/Proteomics/EXPLORIS_2/analytic_20231026/20231026_C33164_049_autoQC01.raw | plot_click: p33256/Proteomics/EXPLORIS_2/analytic_20231101/20231101_C33256_001_autoQC01.raw
plot_click: p33164/Proteomics/EXPLORIS_2/analytic_20231026/20231026_C33164_049_autoQC01.raw | plot_click: p33256/Proteomics/EXPLORIS_2/analytic_20231101/20231101_C33256_001_autoQC01.raw
fn has changed to /srv/www/htdocs//p33164/Proteomics/EXPLORIS_2/analytic_20231026/20231026_C33164_049_autoQC01.raw
Reading raw file: /srv/www/htdocs//p33164/Proteomics/EXPLORIS_2/analytic_20231026/20231026_C33164_049_autoQC01.raw
length = 3
Plotting chromatograms ...
input timeRange: 7776000 | timeMin: 2023-10-27 10:33:30.664 | timeMax: 2023-11-17 10:32:12.767 | timeDiff: 1814322.10299993
autoQC01 module APEX long nrow: 342
LGGNEQVTR, TPVISGGPYEYR, ADVTPADFSEWSK
AUC
Warning: Removed 15 rows containing missing values (`geom_point()`).
Warning: Removed 3 rows containing missing values (`geom_line()`).
plot_click: p33164/Proteomics/EXPLORIS_2/analytic_20231026/20231026_C33164_049_autoQC01.raw | plot_click: p33256/Proteomics/EXPLORIS_2/analytic_20231101/20231101_C33256_001_autoQC01.raw
autoQC01 module APEX long nrow: 456
LGGNEQVTR, TPVISGGPYEYR, ADVTPADFSEWSK, GTFIIDPGGVIR
AUC
Warning: Removed 22 rows containing missing values (`geom_point()`).
Warning: Removed 5 rows containing missing values (`geom_line()`).
Reading raw file: /srv/www/htdocs//p33164/Proteomics/EXPLORIS_2/analytic_20231026/20231026_C33164_049_autoQC01.raw
length = 4
Plotting chromatograms ...
autoQC01 module APEX long nrow: 570
LGGNEQVTR, TPVISGGPYEYR, ADVTPADFSEWSK, GTFIIDPGGVIR, GTFIIDPAAVIR
AUC
Warning: Removed 36 rows containing missing values (`geom_point()`).
Warning: Removed 7 rows containing missing values (`geom_line()`).
Reading raw file: /srv/www/htdocs//p33164/Proteomics/EXPLORIS_2/analytic_20231026/20231026_C33164_049_autoQC01.raw
length = 5
Plotting chromatograms ...
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
autoQC01 module APEX long nrow: 684
LGGNEQVTR, TPVISGGPYEYR, ADVTPADFSEWSK, GTFIIDPGGVIR, GTFIIDPAAVIR, YILAGVENSK
AUC
Warning: Removed 40 rows containing missing values (`geom_point()`).
Warning: Removed 9 rows containing missing values (`geom_line()`).
Reading raw file: /srv/www/htdocs//p33164/Proteomics/EXPLORIS_2/analytic_20231026/20231026_C33164_049_autoQC01.raw
length = 6
Plotting chromatograms ...
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
autoQC01 module APEX long nrow: 798
LGGNEQVTR, TPVISGGPYEYR, ADVTPADFSEWSK, GTFIIDPGGVIR, GTFIIDPAAVIR, YILAGVENSK, GAGSSEPVTGLDAK
AUC
Warning: Removed 52 rows containing missing values (`geom_point()`).
Warning: Removed 11 rows containing missing values (`geom_line()`).
Reading raw file: /srv/www/htdocs//p33164/Proteomics/EXPLORIS_2/analytic_20231026/20231026_C33164_049_autoQC01.raw
length = 7
Plotting chromatograms ...
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
plot_click: p33356/Proteomics/EXPLORIS_2/analytic_20231110/20231110_C33356_001_autoQC01.raw
plot_click: p33356/Proteomics/EXPLORIS_2/analytic_20231110/20231110_C33356_001_autoQC01.raw
fn has changed to /srv/www/htdocs//p33356/Proteomics/EXPLORIS_2/analytic_20231110/20231110_C33356_001_autoQC01.raw
Reading raw file: /srv/www/htdocs//p33356/Proteomics/EXPLORIS_2/analytic_20231110/20231110_C33356_001_autoQC01.raw
length = 7
Plotting chromatograms ...
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
autoQC01 module APEX long nrow: 912
LGGNEQVTR, TPVISGGPYEYR, ADVTPADFSEWSK, GTFIIDPGGVIR, GTFIIDPAAVIR, YILAGVENSK, GAGSSEPVTGLDAK, VEATFGVDESNAK
AUC
Warning: Removed 62 rows containing missing values (`geom_point()`).
Warning: Removed 12 rows containing missing values (`geom_line()`).
plot_click: p33356/Proteomics/EXPLORIS_2/analytic_20231110/20231110_C33356_001_autoQC01.raw
Reading raw file: /srv/www/htdocs//p33356/Proteomics/EXPLORIS_2/analytic_20231110/20231110_C33356_001_autoQC01.raw
length = 8
Plotting chromatograms ...
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
autoQC01 module APEX long nrow: 1026
LGGNEQVTR, TPVISGGPYEYR, ADVTPADFSEWSK, GTFIIDPGGVIR, GTFIIDPAAVIR, YILAGVENSK, GAGSSEPVTGLDAK, VEATFGVDESNAK, TPVITGAPYEYR
AUC
Warning: Removed 73 rows containing missing values (`geom_point()`).
Warning: Removed 16 rows containing missing values (`geom_line()`).
plot_click: p33356/Proteomics/EXPLORIS_2/analytic_20231110/20231110_C33356_001_autoQC01.raw
Reading raw file: /srv/www/htdocs//p33356/Proteomics/EXPLORIS_2/analytic_20231110/20231110_C33356_001_autoQC01.raw
length = 9
Plotting chromatograms ...
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
autoQC01 module APEX long nrow: 1140
LGGNEQVTR, TPVISGGPYEYR, ADVTPADFSEWSK, GTFIIDPGGVIR, GTFIIDPAAVIR, YILAGVENSK, GAGSSEPVTGLDAK, VEATFGVDESNAK, TPVITGAPYEYR, DGLDAASYYAPVR
AUC
Warning: Removed 79 rows containing missing values (`geom_point()`).
Warning: Removed 17 rows containing missing values (`geom_line()`).
plot_click: p33356/Proteomics/EXPLORIS_2/analytic_20231110/20231110_C33356_001_autoQC01.raw
Reading raw file: /srv/www/htdocs//p33356/Proteomics/EXPLORIS_2/analytic_20231110/20231110_C33356_001_autoQC01.raw
length = 10
Plotting chromatograms ...
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
autoQC01 module APEX long nrow: 1254
LGGNEQVTR, TPVISGGPYEYR, ADVTPADFSEWSK, GTFIIDPGGVIR, GTFIIDPAAVIR, YILAGVENSK, GAGSSEPVTGLDAK, VEATFGVDESNAK, TPVITGAPYEYR, DGLDAASYYAPVR, LFLQFGAQGSPFLK
AUC
Warning: Removed 98 rows containing missing values (`geom_point()`).
Warning: Removed 18 rows containing missing values (`geom_line()`).
Reading raw file: /srv/www/htdocs//p33356/Proteomics/EXPLORIS_2/analytic_20231110/20231110_C33356_001_autoQC01.raw
length = 11
Plotting chromatograms ...
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
plot_click: p33256/Proteomics/EXPLORIS_2/analytic_20231101/20231101_C33256_001_autoQC01.raw
plot_click: p33256/Proteomics/EXPLORIS_2/analytic_20231101/20231101_C33256_001_autoQC01.raw
fn has changed to /srv/www/htdocs//p33256/Proteomics/EXPLORIS_2/analytic_20231101/20231101_C33256_001_autoQC01.raw
Reading raw file: /srv/www/htdocs//p33256/Proteomics/EXPLORIS_2/analytic_20231101/20231101_C33256_001_autoQC01.raw
length = 11
Plotting chromatograms ...
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
autoQC01 module APEX long nrow: 1140
LGGNEQVTR, TPVISGGPYEYR, ADVTPADFSEWSK, GTFIIDPGGVIR, GTFIIDPAAVIR, YILAGVENSK, GAGSSEPVTGLDAK, VEATFGVDESNAK, TPVITGAPYEYR, DGLDAASYYAPVR
AUC
Warning: Removed 79 rows containing missing values (`geom_point()`).
Warning: Removed 17 rows containing missing values (`geom_line()`).
plot_click: p33256/Proteomics/EXPLORIS_2/analytic_20231101/20231101_C33256_001_autoQC01.raw
Reading raw file: /srv/www/htdocs//p33256/Proteomics/EXPLORIS_2/analytic_20231101/20231101_C33256_001_autoQC01.raw
length = 10
Plotting chromatograms ...
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
autoQC01 module APEX long nrow: 1026
LGGNEQVTR, TPVISGGPYEYR, ADVTPADFSEWSK, GTFIIDPGGVIR, GTFIIDPAAVIR, YILAGVENSK, GAGSSEPVTGLDAK, VEATFGVDESNAK, TPVITGAPYEYR
AUC
Warning: Removed 73 rows containing missing values (`geom_point()`).
Warning: Removed 16 rows containing missing values (`geom_line()`).
plot_click: p33256/Proteomics/EXPLORIS_2/analytic_20231101/20231101_C33256_001_autoQC01.raw
Reading raw file: /srv/www/htdocs//p33256/Proteomics/EXPLORIS_2/analytic_20231101/20231101_C33256_001_autoQC01.raw
length = 9
Plotting chromatograms ...
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
autoQC01 module APEX long nrow: 912
LGGNEQVTR, TPVISGGPYEYR, ADVTPADFSEWSK, GTFIIDPGGVIR, GTFIIDPAAVIR, YILAGVENSK, GAGSSEPVTGLDAK, VEATFGVDESNAK
AUC
Warning: Removed 62 rows containing missing values (`geom_point()`).
Warning: Removed 12 rows containing missing values (`geom_line()`).
plot_click: p33256/Proteomics/EXPLORIS_2/analytic_20231101/20231101_C33256_001_autoQC01.raw
Reading raw file: /srv/www/htdocs//p33256/Proteomics/EXPLORIS_2/analytic_20231101/20231101_C33256_001_autoQC01.raw
length = 8
Plotting chromatograms ...
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
autoQC01 module APEX long nrow: 798
LGGNEQVTR, TPVISGGPYEYR, ADVTPADFSEWSK, GTFIIDPGGVIR, GTFIIDPAAVIR, GAGSSEPVTGLDAK, VEATFGVDESNAK
AUC
Warning: Removed 58 rows containing missing values (`geom_point()`).
Warning: Removed 10 rows containing missing values (`geom_line()`).
Reading raw file: /srv/www/htdocs//p33256/Proteomics/EXPLORIS_2/analytic_20231101/20231101_C33256_001_autoQC01.raw
length = 7
Plotting chromatograms ...
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
autoQC01 module APEX long nrow: 684
LGGNEQVTR, TPVISGGPYEYR, ADVTPADFSEWSK, GTFIIDPGGVIR, GAGSSEPVTGLDAK, VEATFGVDESNAK
AUC
Warning: Removed 44 rows containing missing values (`geom_point()`).
Warning: Removed 8 rows containing missing values (`geom_line()`).
Reading raw file: /srv/www/htdocs//p33256/Proteomics/EXPLORIS_2/analytic_20231101/20231101_C33256_001_autoQC01.raw
length = 6
Plotting chromatograms ...
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
autoQC01 module APEX long nrow: 570
LGGNEQVTR, TPVISGGPYEYR, ADVTPADFSEWSK, GAGSSEPVTGLDAK, VEATFGVDESNAK
AUC
Warning: Removed 37 rows containing missing values (`geom_point()`).
Warning: Removed 6 rows containing missing values (`geom_line()`).
Reading raw file: /srv/www/htdocs//p33256/Proteomics/EXPLORIS_2/analytic_20231101/20231101_C33256_001_autoQC01.raw
length = 5
Plotting chromatograms ...
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
autoQC01 module APEX long nrow: 456
LGGNEQVTR, TPVISGGPYEYR, GAGSSEPVTGLDAK, VEATFGVDESNAK
AUC
Warning: Removed 33 rows containing missing values (`geom_point()`).
Warning: Removed 5 rows containing missing values (`geom_line()`).
Reading raw file: /srv/www/htdocs//p33256/Proteomics/EXPLORIS_2/analytic_20231101/20231101_C33256_001_autoQC01.raw
length = 4
Plotting chromatograms ...
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
autoQC01 module APEX long nrow: 342
LGGNEQVTR, GAGSSEPVTGLDAK, VEATFGVDESNAK
AUC
Warning: Removed 27 rows containing missing values (`geom_point()`).
Warning: Removed 4 rows containing missing values (`geom_line()`).
Reading raw file: /srv/www/htdocs//p33256/Proteomics/EXPLORIS_2/analytic_20231101/20231101_C33256_001_autoQC01.raw
length = 3
Plotting chromatograms ...
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
input timeRange: 7776000 | timeMin: 2023-08-28 10:41:19.751 | timeMax: 2023-11-17 10:32:12.767 | timeDiff: 6997853.01600003
autoQC01 module APEX long nrow: 1404
LGGNEQVTR, GAGSSEPVTGLDAK, VEATFGVDESNAK
AUC
Warning: Removed 60 rows containing missing values (`geom_point()`).
Warning: Removed 2 rows containing missing values (`geom_line()`).
input timeRange: 31536000 | timeMin: 2023-08-28 10:41:19.751 | timeMax: 2023-11-17 11:51:39.867995 | timeDiff: 6999020.11699533
autoQC01 module APEX long nrow: 1404
LGGNEQVTR, GAGSSEPVTGLDAK, VEATFGVDESNAK
AUC
Warning: Removed 60 rows containing missing values (`geom_point()`).
Warning: Removed 2 rows containing missing values (`geom_line()`).
input timeRange: 31536000 | timeMin: 2023-08-28 10:41:19.751 | timeMax: 2023-11-17 10:51:39.868 | timeDiff: 6999020.1170001
autoQC01 module APEX long nrow: 1404
LGGNEQVTR, GAGSSEPVTGLDAK, VEATFGVDESNAK
AUC
Warning: Removed 60 rows containing missing values (`geom_point()`).
Warning: Removed 2 rows containing missing values (`geom_line()`).
input timeRange: 31536000 | timeMin: 2023-02-03 10:51:40.573 | timeMax: 2023-11-17 10:51:39.868 | timeDiff: 24796799.2950001
autoQC01 module APEX long nrow: 3906
LGGNEQVTR, GAGSSEPVTGLDAK, VEATFGVDESNAK
AUC
Warning: Removed 122 rows containing missing values (`geom_point()`).
autoQC01 module APEX long nrow: 2604
LGGNEQVTR, GAGSSEPVTGLDAK
AUC
Warning: Removed 66 rows containing missing values (`geom_point()`).
Reading raw file: /srv/www/htdocs//p33256/Proteomics/EXPLORIS_2/analytic_20231101/20231101_C33256_001_autoQC01.raw
length = 2
Plotting chromatograms ...
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
Warning: Removed 66 rows containing missing values (`geom_point()`).
plot_click: p32865/Proteomics/EXPLORIS_2/analytic_20231018/20231019_C32865_001_autoQC01.raw
plot_click: p32865/Proteomics/EXPLORIS_2/analytic_20231018/20231019_C32865_001_autoQC01.raw
fn has changed to /srv/www/htdocs//p32865/Proteomics/EXPLORIS_2/analytic_20231018/20231019_C32865_001_autoQC01.raw
Reading raw file: /srv/www/htdocs//p32865/Proteomics/EXPLORIS_2/analytic_20231018/20231019_C32865_001_autoQC01.raw
length = 2
Plotting chromatograms ...
plot_click: p32787/Proteomics/EXPLORIS_2/analytic_20230914/20230914_C32787_007_autoQC01.raw
plot_click: p32787/Proteomics/EXPLORIS_2/analytic_20230914/20230914_C32787_007_autoQC01.raw
fn has changed to /srv/www/htdocs//p32787/Proteomics/EXPLORIS_2/analytic_20230914/20230914_C32787_007_autoQC01.raw
Reading raw file: /srv/www/htdocs//p32787/Proteomics/EXPLORIS_2/analytic_20230914/20230914_C32787_007_autoQC01.raw
length = 2
Plotting chromatograms ...
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
plot_click: p31406/Proteomics/EXPLORIS_2/analytic_20230412/20230412_C31406_010_autoQC01.raw
plot_click: p31406/Proteomics/EXPLORIS_2/analytic_20230412/20230412_C31406_010_autoQC01.raw
fn has changed to /srv/www/htdocs//p31406/Proteomics/EXPLORIS_2/analytic_20230412/20230412_C31406_010_autoQC01.raw
Reading raw file: /srv/www/htdocs//p31406/Proteomics/EXPLORIS_2/analytic_20230412/20230412_C31406_010_autoQC01.raw
length = 2
Plotting chromatograms ...
plot_click: p32778/Proteomics/EXPLORIS_2/analytic_20230907/20230907_C32778_001_autoQC01_PepSep.raw
plot_click: p32778/Proteomics/EXPLORIS_2/analytic_20230907/20230907_C32778_001_autoQC01_PepSep.raw
fn has changed to /srv/www/htdocs//p32778/Proteomics/EXPLORIS_2/analytic_20230907/20230907_C32778_001_autoQC01_PepSep.raw
Reading raw file: /srv/www/htdocs//p32778/Proteomics/EXPLORIS_2/analytic_20230907/20230907_C32778_001_autoQC01_PepSep.raw
length = 2
Plotting chromatograms ...
plot_click: p31406/Proteomics/EXPLORIS_2/analytic_20230412/20230412_C31406_001_autoQC01.raw
plot_click: p31406/Proteomics/EXPLORIS_2/analytic_20230412/20230412_C31406_001_autoQC01.raw
fn has changed to /srv/www/htdocs//p31406/Proteomics/EXPLORIS_2/analytic_20230412/20230412_C31406_001_autoQC01.raw
Reading raw file: /srv/www/htdocs//p31406/Proteomics/EXPLORIS_2/analytic_20230412/20230412_C31406_001_autoQC01.raw
length = 2
Plotting chromatograms ...
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
autoQC01 module APEX long nrow: 3906
LGGNEQVTR, GAGSSEPVTGLDAK, YILAGVENSK
AUC
Warning: Removed 90 rows containing missing values (`geom_point()`).
Warning: Removed 1 row containing missing values (`geom_line()`).
plot_click: p31406/Proteomics/EXPLORIS_2/analytic_20230412/20230412_C31406_001_autoQC01.raw
Reading raw file: /srv/www/htdocs//p31406/Proteomics/EXPLORIS_2/analytic_20230412/20230412_C31406_001_autoQC01.raw
length = 3
Plotting chromatograms ...
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
plot_click: p31749/Proteomics/EXPLORIS_2/analytic_20230613/20230613_C31749_029_autoQC01.raw
plot_click: p31749/Proteomics/EXPLORIS_2/analytic_20230613/20230613_C31749_029_autoQC01.raw
fn has changed to /srv/www/htdocs//p31749/Proteomics/EXPLORIS_2/analytic_20230613/20230613_C31749_029_autoQC01.raw
Reading raw file: /srv/www/htdocs//p31749/Proteomics/EXPLORIS_2/analytic_20230613/20230613_C31749_029_autoQC01.raw
length = 3
Plotting chromatograms ...
autoQC01 module APEX long nrow: 3501
LGGNEQVTR, GAGSSEPVTGLDAK, YILAGVENSK
AUC
Warning: Removed 12 rows containing missing values (`geom_point()`).
plot_click: 
plot_click: p31701/Proteomics/QEXACTIVE_1/analytic_20230510/20230510_C31701_0011_autoQC01.raw
plot_click: p31701/Proteomics/QEXACTIVE_1/analytic_20230510/20230510_C31701_0011_autoQC01.raw
fn has changed to /srv/www/htdocs//p31701/Proteomics/QEXACTIVE_1/analytic_20230510/20230510_C31701_0011_autoQC01.raw
Reading raw file: /srv/www/htdocs//p31701/Proteomics/QEXACTIVE_1/analytic_20230510/20230510_C31701_0011_autoQC01.raw
length = 3
Plotting chromatograms ...
autoQC01 module APEX long nrow: 4668
LGGNEQVTR, GAGSSEPVTGLDAK, YILAGVENSK, DGLDAASYYAPVR
AUC
Warning: Removed 15 rows containing missing values (`geom_point()`).
plot_click: p31701/Proteomics/QEXACTIVE_1/analytic_20230510/20230510_C31701_0011_autoQC01.raw
Reading raw file: /srv/www/htdocs//p31701/Proteomics/QEXACTIVE_1/analytic_20230510/20230510_C31701_0011_autoQC01.raw
length = 4
Plotting chromatograms ...
plot_click: p32226/Proteomics/QEXACTIVE_1/analytic_20230725/20230725_C32226_002_autoQC01.raw | plot_click: p32428/Proteomics/QEXACTIVE_1/analytic_20230725/20230725_C32428_001_autoQC01.raw
plot_click: p32226/Proteomics/QEXACTIVE_1/analytic_20230725/20230725_C32226_002_autoQC01.raw | plot_click: p32428/Proteomics/QEXACTIVE_1/analytic_20230725/20230725_C32428_001_autoQC01.raw
fn has changed to /srv/www/htdocs//p32226/Proteomics/QEXACTIVE_1/analytic_20230725/20230725_C32226_002_autoQC01.raw
Reading raw file: /srv/www/htdocs//p32226/Proteomics/QEXACTIVE_1/analytic_20230725/20230725_C32226_002_autoQC01.raw
length = 4
Plotting chromatograms ...
autoQC01 module APEX long nrow: 4896
LGGNEQVTR, GAGSSEPVTGLDAK, YILAGVENSK, DGLDAASYYAPVR
AUC
Warning: Removed 318 rows containing missing values (`geom_point()`).
Warning: Removed 2 rows containing missing values (`geom_line()`).
plot_click: 
input timeRange: 31536000 | timeMin: 2023-09-27 10:51:43.609 | timeMax: 2023-11-17 10:51:39.868 | timeDiff: 4406396.25900006
autoQC01 module APEX long nrow: 1056
LGGNEQVTR, GAGSSEPVTGLDAK, YILAGVENSK, DGLDAASYYAPVR
AUC
Warning: Removed 40 rows containing missing values (`geom_point()`).
Warning: Removed 40 rows containing missing values (`geom_point()`).
autoQC01 module APEX long nrow: 1056
LGGNEQVTR, GAGSSEPVTGLDAK, YILAGVENSK, DGLDAASYYAPVR
AUCAPEX
Warning: Removed 80 rows containing missing values (`geom_point()`).
autoQC01 module APEX long nrow: 1056
LGGNEQVTR, GAGSSEPVTGLDAK, YILAGVENSK, DGLDAASYYAPVR
AUCAPEXFWHM
Warning: Removed 120 rows containing missing values (`geom_point()`).
autoQC01 module APEX long nrow: 1056
LGGNEQVTR, GAGSSEPVTGLDAK, YILAGVENSK, DGLDAASYYAPVR
AUCAPEX
Warning: Removed 80 rows containing missing values (`geom_point()`).
autoQC01 module APEX long nrow: 1140
LGGNEQVTR, GAGSSEPVTGLDAK, YILAGVENSK, DGLDAASYYAPVR
AUCAPEX
Warning: Removed 106 rows containing missing values (`geom_point()`).
Warning: Removed 3 rows containing missing values (`geom_line()`).
plot_click: p33344/Proteomics/EXPLORIS_2/analytic_20231110/20231110_C33344_006_autoQC01.raw | plot_click: p33344/Proteomics/EXPLORIS_2/analytic_20231110/20231110_C33344_001_autoQC01.raw
plot_click: p33344/Proteomics/EXPLORIS_2/analytic_20231110/20231110_C33344_006_autoQC01.raw | plot_click: p33344/Proteomics/EXPLORIS_2/analytic_20231110/20231110_C33344_001_autoQC01.raw
fn has changed to /srv/www/htdocs//p33344/Proteomics/EXPLORIS_2/analytic_20231110/20231110_C33344_006_autoQC01.raw
Reading raw file: /srv/www/htdocs//p33344/Proteomics/EXPLORIS_2/analytic_20231110/20231110_C33344_006_autoQC01.raw
length = 4
Plotting chromatograms ...
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
plot_click: p3000/Proteomics/EXPLORIS_2/analytic_20231113/20231113_004_autoQC01.raw | plot_click: p3000/Proteomics/EXPLORIS_2/analytic_20231113/20231113_002_autoQC01.raw | plot_click: p3000/Proteomics/EXPLORIS_2/analytic_20231113/20231113_004_autoQC01.raw
plot_click: p3000/Proteomics/EXPLORIS_2/analytic_20231113/20231113_004_autoQC01.raw | plot_click: p3000/Proteomics/EXPLORIS_2/analytic_20231113/20231113_002_autoQC01.raw | plot_click: p3000/Proteomics/EXPLORIS_2/analytic_20231113/20231113_004_autoQC01.raw
fn has changed to /srv/www/htdocs//p3000/Proteomics/EXPLORIS_2/analytic_20231113/20231113_004_autoQC01.raw
Reading raw file: /srv/www/htdocs//p3000/Proteomics/EXPLORIS_2/analytic_20231113/20231113_004_autoQC01.raw
length = 4
Plotting chromatograms ...
Warning: Removed 106 rows containing missing values (`geom_point()`).
Warning: Removed 3 rows containing missing values (`geom_line()`).
plot_click: 
plot_click: 
fn has changed to /srv/www/htdocs//NA
plot_click: p33164/Proteomics/EXPLORIS_2/analytic_20231026/20231026_C33164_001c_autoQC01.raw
plot_click: p33164/Proteomics/EXPLORIS_2/analytic_20231026/20231026_C33164_001c_autoQC01.raw
fn has changed to /srv/www/htdocs//p33164/Proteomics/EXPLORIS_2/analytic_20231026/20231026_C33164_001c_autoQC01.raw
Reading raw file: /srv/www/htdocs//p33164/Proteomics/EXPLORIS_2/analytic_20231026/20231026_C33164_001c_autoQC01.raw
length = 4
Plotting chromatograms ...
plot_click: 
plot_click: 
fn has changed to /srv/www/htdocs//NA
plot_click: 
plot_click: 
plot_click: 
plot_click: 
plot_click: p33164/Proteomics/EXPLORIS_2/analytic_20231026/20231026_C33164_001_autoQC01.raw
plot_click: p33164/Proteomics/EXPLORIS_2/analytic_20231026/20231026_C33164_001_autoQC01.raw
fn has changed to /srv/www/htdocs//p33164/Proteomics/EXPLORIS_2/analytic_20231026/20231026_C33164_001_autoQC01.raw
Reading raw file: /srv/www/htdocs//p33164/Proteomics/EXPLORIS_2/analytic_20231026/20231026_C33164_001_autoQC01.raw
length = 4
Plotting chromatograms ...
cometTimes:3809 | 74633
comet filter length: 0
cometTimes:3809 | 74633
comet filter length: 66
Warning: Error in if: argument is of length zero
  97: renderUI [/export/data01/scratch/DIAQC/qc/inst/shiny/fgczmsqc-dashboard/server.R#470]
  96: func
  83: renderFunc
  82: output$fileOutput
   1: runApp
Warning: Removed 106 rows containing missing values (`geom_point()`).
Warning: Removed 3 rows containing missing values (`geom_line()`).
input timeRange: 7776000 | timeMin: 2023-10-27 13:12:00.984648 | timeMax: 2023-11-17 12:12:00.985344 | timeDiff: 1814400.00069571
autoQC01 module APEX wide nrow: 244574
autoQC01 module APEX long nrow: 342
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUC
Warning: Removed 30 rows containing missing values (`geom_point()`).
Warning: Removed 3 rows containing missing values (`geom_line()`).
input timeRange: 7776000 | timeMin: 2023-10-27 11:12:00.985 | timeMax: 2023-11-17 11:12:00.985 | timeDiff: 1814400
autoQC01 module APEX long nrow: 228
LGGNEQVTR, TPVISGGPYEYR
AUC
Warning: Removed 11 rows containing missing values (`geom_point()`).
Warning: Removed 2 rows containing missing values (`geom_line()`).
autoQC01 module APEX long nrow: 342
LGGNEQVTR, TPVISGGPYEYR, GAGSSEPVTGLDAK
AUC
Warning: Removed 23 rows containing missing values (`geom_point()`).
Warning: Removed 4 rows containing missing values (`geom_line()`).
autoQC01 module APEX long nrow: 456
LGGNEQVTR, TPVISGGPYEYR, GAGSSEPVTGLDAK, DGLDAASYYAPVR
AUC
Warning: Removed 29 rows containing missing values (`geom_point()`).
Warning: Removed 5 rows containing missing values (`geom_line()`).
autoQC01 module APEX long nrow: 342
LGGNEQVTR, GAGSSEPVTGLDAK, DGLDAASYYAPVR
AUC
Warning: Removed 23 rows containing missing values (`geom_point()`).
Warning: Removed 4 rows containing missing values (`geom_line()`).
input timeRange: 7776000 | timeMin: 2023-10-13 11:12:04.199 | timeMax: 2023-11-17 11:12:00.985 | timeDiff: 3023996.78600001
autoQC01 module APEX long nrow: 603
LGGNEQVTR, GAGSSEPVTGLDAK, DGLDAASYYAPVR
AUC
Warning: Removed 37 rows containing missing values (`geom_point()`).
autoQC01 module APEX long nrow: 804
LGGNEQVTR, GAGSSEPVTGLDAK, DGLDAASYYAPVR, VEATFGVDESNAK
AUC
Warning: Removed 51 rows containing missing values (`geom_point()`).
autoQC01 module APEX long nrow: 1005
LGGNEQVTR, GAGSSEPVTGLDAK, DGLDAASYYAPVR, VEATFGVDESNAK, TPVITGAPYEYR
AUC
Warning: Removed 69 rows containing missing values (`geom_point()`).
Warning: Removed 2 rows containing missing values (`geom_line()`).
autoQC01 module APEX long nrow: 1206
LGGNEQVTR, GAGSSEPVTGLDAK, DGLDAASYYAPVR, VEATFGVDESNAK, TPVITGAPYEYR, LFLQFGAQGSPFLK
AUC
Warning: Removed 95 rows containing missing values (`geom_point()`).
Warning: Removed 2 rows containing missing values (`geom_line()`).
autoQC01 module APEX long nrow: 1407
LGGNEQVTR, GAGSSEPVTGLDAK, DGLDAASYYAPVR, VEATFGVDESNAK, TPVITGAPYEYR, LFLQFGAQGSPFLK, ADVTPADFSEWSK
AUC
Warning: Removed 104 rows containing missing values (`geom_point()`).
Warning: Removed 2 rows containing missing values (`geom_line()`).
autoQC01 module APEX long nrow: 1608
LGGNEQVTR, GAGSSEPVTGLDAK, DGLDAASYYAPVR, VEATFGVDESNAK, TPVITGAPYEYR, LFLQFGAQGSPFLK, ADVTPADFSEWSK, GTFIIDPAAVIR
AUC
Warning: Removed 122 rows containing missing values (`geom_point()`).
Warning: Removed 3 rows containing missing values (`geom_line()`).
autoQC01 module APEX long nrow: 1809
LGGNEQVTR, GAGSSEPVTGLDAK, DGLDAASYYAPVR, VEATFGVDESNAK, TPVITGAPYEYR, LFLQFGAQGSPFLK, ADVTPADFSEWSK, GTFIIDPAAVIR, TPVISGGPYEYR
AUC
Warning: Removed 133 rows containing missing values (`geom_point()`).
Warning: Removed 3 rows containing missing values (`geom_line()`).
autoQC01 module APEX long nrow: 2010
LGGNEQVTR, GAGSSEPVTGLDAK, DGLDAASYYAPVR, VEATFGVDESNAK, TPVITGAPYEYR, LFLQFGAQGSPFLK, ADVTPADFSEWSK, GTFIIDPAAVIR, TPVISGGPYEYR, GTFIIDPGGVIR
AUC
Warning: Removed 146 rows containing missing values (`geom_point()`).
Warning: Removed 3 rows containing missing values (`geom_line()`).
autoQC01 module APEX long nrow: 2211
LGGNEQVTR, GAGSSEPVTGLDAK, DGLDAASYYAPVR, VEATFGVDESNAK, TPVITGAPYEYR, LFLQFGAQGSPFLK, ADVTPADFSEWSK, GTFIIDPAAVIR, TPVISGGPYEYR, GTFIIDPGGVIR, YILAGVENSK
AUC
Warning: Removed 155 rows containing missing values (`geom_point()`).
Warning: Removed 4 rows containing missing values (`geom_line()`).
input timeRange: 7776000 | timeMin: 2023-10-27 13:18:29.608307 | timeMax: 2023-11-17 12:18:29.609009 | timeDiff: 1814400.00070167
autoQC01 module APEX wide nrow: 244574
autoQC01 module APEX long nrow: 342
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUC
Warning: Removed 30 rows containing missing values (`geom_point()`).
Warning: Removed 3 rows containing missing values (`geom_line()`).
input timeRange: 7776000 | timeMin: 2023-10-27 11:18:29.608 | timeMax: 2023-11-17 11:18:29.609 | timeDiff: 1814400.00099993
plot_click: p33314/Proteomics/EXPLORIS_2/analytic_20231107/20231107_C33314_018_autoQC01.raw
plot_click: p33314/Proteomics/EXPLORIS_2/analytic_20231107/20231107_C33314_018_autoQC01.raw
fn has changed to /srv/www/htdocs//p33314/Proteomics/EXPLORIS_2/analytic_20231107/20231107_C33314_018_autoQC01.raw
Reading raw file: /srv/www/htdocs//p33314/Proteomics/EXPLORIS_2/analytic_20231107/20231107_C33314_018_autoQC01.raw
length = 3
Plotting chromatograms ...
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
plot_click: p3000/Proteomics/EXPLORIS_2/analytic_20231113/20231113_004_autoQC01.raw
plot_click: p3000/Proteomics/EXPLORIS_2/analytic_20231113/20231113_004_autoQC01.raw
fn has changed to /srv/www/htdocs//p3000/Proteomics/EXPLORIS_2/analytic_20231113/20231113_004_autoQC01.raw
Reading raw file: /srv/www/htdocs//p3000/Proteomics/EXPLORIS_2/analytic_20231113/20231113_004_autoQC01.raw
length = 3
Plotting chromatograms ...
plot_click: p33314/Proteomics/EXPLORIS_2/analytic_20231107/20231107_C33314_001_autoQC01.raw | plot_click: p33314/Proteomics/EXPLORIS_2/analytic_20231107/20231107_C33314_001_autoQC01.raw | plot_click: p33314/Proteomics/EXPLORIS_2/analytic_20231107/20231107_C33314_001_autoQC01.raw
plot_click: p33314/Proteomics/EXPLORIS_2/analytic_20231107/20231107_C33314_001_autoQC01.raw | plot_click: p33314/Proteomics/EXPLORIS_2/analytic_20231107/20231107_C33314_001_autoQC01.raw | plot_click: p33314/Proteomics/EXPLORIS_2/analytic_20231107/20231107_C33314_001_autoQC01.raw
fn has changed to /srv/www/htdocs//p33314/Proteomics/EXPLORIS_2/analytic_20231107/20231107_C33314_001_autoQC01.raw
Reading raw file: /srv/www/htdocs//p33314/Proteomics/EXPLORIS_2/analytic_20231107/20231107_C33314_001_autoQC01.raw
length = 3
Plotting chromatograms ...
autoQC01 module APEX long nrow: 456
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, YILAGVENSK
AUC
Warning: Removed 34 rows containing missing values (`geom_point()`).
Warning: Removed 5 rows containing missing values (`geom_line()`).
plot_click: p33314/Proteomics/EXPLORIS_2/analytic_20231107/20231107_C33314_001_autoQC01.raw | plot_click: p33314/Proteomics/EXPLORIS_2/analytic_20231107/20231107_C33314_001_autoQC01.raw | plot_click: p33314/Proteomics/EXPLORIS_2/analytic_20231107/20231107_C33314_001_autoQC01.raw
Reading raw file: /srv/www/htdocs//p33314/Proteomics/EXPLORIS_2/analytic_20231107/20231107_C33314_001_autoQC01.raw
length = 4
Plotting chromatograms ...
autoQC01 module APEX long nrow: 570
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, YILAGVENSK, GTFIIDPGGVIR
AUC
Warning: Removed 41 rows containing missing values (`geom_point()`).
Warning: Removed 7 rows containing missing values (`geom_line()`).
plot_click: p33314/Proteomics/EXPLORIS_2/analytic_20231107/20231107_C33314_001_autoQC01.raw | plot_click: p33314/Proteomics/EXPLORIS_2/analytic_20231107/20231107_C33314_001_autoQC01.raw | plot_click: p33314/Proteomics/EXPLORIS_2/analytic_20231107/20231107_C33314_001_autoQC01.raw
Reading raw file: /srv/www/htdocs//p33314/Proteomics/EXPLORIS_2/analytic_20231107/20231107_C33314_001_autoQC01.raw
length = 5
Plotting chromatograms ...
autoQC01 module APEX long nrow: 684
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, YILAGVENSK, GTFIIDPGGVIR, GTFIIDPAAVIR
AUC
Warning: Removed 55 rows containing missing values (`geom_point()`).
Warning: Removed 9 rows containing missing values (`geom_line()`).
plot_click: p33314/Proteomics/EXPLORIS_2/analytic_20231107/20231107_C33314_001_autoQC01.raw | plot_click: p33314/Proteomics/EXPLORIS_2/analytic_20231107/20231107_C33314_001_autoQC01.raw | plot_click: p33314/Proteomics/EXPLORIS_2/analytic_20231107/20231107_C33314_001_autoQC01.raw
Reading raw file: /srv/www/htdocs//p33314/Proteomics/EXPLORIS_2/analytic_20231107/20231107_C33314_001_autoQC01.raw
length = 6
Plotting chromatograms ...
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
autoQC01 module APEX long nrow: 798
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, YILAGVENSK, GTFIIDPGGVIR, GTFIIDPAAVIR, GAGSSEPVTGLDAK
AUC
Warning: Removed 67 rows containing missing values (`geom_point()`).
Warning: Removed 11 rows containing missing values (`geom_line()`).
Reading raw file: /srv/www/htdocs//p33314/Proteomics/EXPLORIS_2/analytic_20231107/20231107_C33314_001_autoQC01.raw
length = 7
Plotting chromatograms ...
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
autoQC01 module APEX long nrow: 912
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, YILAGVENSK, GTFIIDPGGVIR, GTFIIDPAAVIR, GAGSSEPVTGLDAK, VEATFGVDESNAK
AUC
Warning: Removed 77 rows containing missing values (`geom_point()`).
Warning: Removed 12 rows containing missing values (`geom_line()`).
Reading raw file: /srv/www/htdocs//p33314/Proteomics/EXPLORIS_2/analytic_20231107/20231107_C33314_001_autoQC01.raw
length = 8
Plotting chromatograms ...
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
autoQC01 module APEX long nrow: 1026
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, YILAGVENSK, GTFIIDPGGVIR, GTFIIDPAAVIR, GAGSSEPVTGLDAK, VEATFGVDESNAK, TPVITGAPYEYR
AUC
Warning: Removed 88 rows containing missing values (`geom_point()`).
Warning: Removed 16 rows containing missing values (`geom_line()`).
Reading raw file: /srv/www/htdocs//p33314/Proteomics/EXPLORIS_2/analytic_20231107/20231107_C33314_001_autoQC01.raw
length = 9
Plotting chromatograms ...
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
autoQC01 module APEX long nrow: 1140
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, YILAGVENSK, GTFIIDPGGVIR, GTFIIDPAAVIR, GAGSSEPVTGLDAK, VEATFGVDESNAK, TPVITGAPYEYR, DGLDAASYYAPVR
AUC
Warning: Removed 94 rows containing missing values (`geom_point()`).
Warning: Removed 17 rows containing missing values (`geom_line()`).
Reading raw file: /srv/www/htdocs//p33314/Proteomics/EXPLORIS_2/analytic_20231107/20231107_C33314_001_autoQC01.raw
length = 10
Plotting chromatograms ...
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
autoQC01 module APEX long nrow: 1254
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, YILAGVENSK, GTFIIDPGGVIR, GTFIIDPAAVIR, GAGSSEPVTGLDAK, VEATFGVDESNAK, TPVITGAPYEYR, DGLDAASYYAPVR, ADVTPADFSEWSK
AUC
Warning: Removed 98 rows containing missing values (`geom_point()`).
Warning: Removed 18 rows containing missing values (`geom_line()`).
Reading raw file: /srv/www/htdocs//p33314/Proteomics/EXPLORIS_2/analytic_20231107/20231107_C33314_001_autoQC01.raw
length = 11
Plotting chromatograms ...
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
Warning: Removed 98 rows containing missing values (`geom_point()`).
Warning: Removed 18 rows containing missing values (`geom_line()`).
Plotting chromatograms ...
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
autoQC01 module APEX long nrow: 1254
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, YILAGVENSK, GTFIIDPGGVIR, GTFIIDPAAVIR, GAGSSEPVTGLDAK, VEATFGVDESNAK, TPVITGAPYEYR, DGLDAASYYAPVR, ADVTPADFSEWSK
AUCAPEX
Warning: Removed 196 rows containing missing values (`geom_point()`).
Warning: Removed 18 rows containing missing values (`geom_line()`).
plot_click: p33314/Proteomics/EXPLORIS_2/analytic_20231107/20231107_C33314_001_autoQC01.raw
plot_click: p33314/Proteomics/EXPLORIS_2/analytic_20231107/20231107_C33314_001_autoQC01.raw
plot_click: p33274/Proteomics/EXPLORIS_2/analytic_20231106/20231106_C33274_017_autoQC01.raw
plot_click: p33274/Proteomics/EXPLORIS_2/analytic_20231106/20231106_C33274_017_autoQC01.raw
fn has changed to /srv/www/htdocs//p33274/Proteomics/EXPLORIS_2/analytic_20231106/20231106_C33274_017_autoQC01.raw
Reading raw file: /srv/www/htdocs//p33274/Proteomics/EXPLORIS_2/analytic_20231106/20231106_C33274_017_autoQC01.raw
length = 11
Plotting chromatograms ...
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
plot_click: p33356/Proteomics/EXPLORIS_2/analytic_20231110/20231110_C33356_001_autoQC01.raw
plot_click: p33356/Proteomics/EXPLORIS_2/analytic_20231110/20231110_C33356_001_autoQC01.raw
fn has changed to /srv/www/htdocs//p33356/Proteomics/EXPLORIS_2/analytic_20231110/20231110_C33356_001_autoQC01.raw
Reading raw file: /srv/www/htdocs//p33356/Proteomics/EXPLORIS_2/analytic_20231110/20231110_C33356_001_autoQC01.raw
length = 11
Plotting chromatograms ...
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
autoQC01 module APEX long nrow: 1089
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, YILAGVENSK, GTFIIDPGGVIR, GTFIIDPAAVIR, GAGSSEPVTGLDAK, VEATFGVDESNAK, TPVITGAPYEYR, DGLDAASYYAPVR, ADVTPADFSEWSK
AUCAPEX
Warning: Removed 20 rows containing missing values (`geom_point()`).
Warning: Removed 1 row containing missing values (`geom_line()`).
plot_click: 
plot_click: p3000/Proteomics/QEXACTIVE_1/analytic_20231114/20231114_C3000_003_autoQC01.raw
plot_click: p3000/Proteomics/QEXACTIVE_1/analytic_20231114/20231114_C3000_003_autoQC01.raw
fn has changed to /srv/www/htdocs//p3000/Proteomics/QEXACTIVE_1/analytic_20231114/20231114_C3000_003_autoQC01.raw
Reading raw file: /srv/www/htdocs//p3000/Proteomics/QEXACTIVE_1/analytic_20231114/20231114_C3000_003_autoQC01.raw
length = 11
Plotting chromatograms ...
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
plot_click: p33171/Proteomics/QEXACTIVE_1/analytic_20231110/20231110_C33171_010_autoQC01.raw
plot_click: p33171/Proteomics/QEXACTIVE_1/analytic_20231110/20231110_C33171_010_autoQC01.raw
fn has changed to /srv/www/htdocs//p33171/Proteomics/QEXACTIVE_1/analytic_20231110/20231110_C33171_010_autoQC01.raw
Reading raw file: /srv/www/htdocs//p33171/Proteomics/QEXACTIVE_1/analytic_20231110/20231110_C33171_010_autoQC01.raw
length = 11
Plotting chromatograms ...
plot_click: p3000/Proteomics/QEXACTIVE_1/analytic_20231114/20231114_C3000_003_autoQC01.raw | plot_click: p3000/Proteomics/QEXACTIVE_1/analytic_20231114/20231114_C3000_003_autoQC01.raw | plot_click: p3000/Proteomics/QEXACTIVE_1/analytic_20231114/20231114_C3000_003_autoQC01.raw
plot_click: p3000/Proteomics/QEXACTIVE_1/analytic_20231114/20231114_C3000_003_autoQC01.raw | plot_click: p3000/Proteomics/QEXACTIVE_1/analytic_20231114/20231114_C3000_003_autoQC01.raw | plot_click: p3000/Proteomics/QEXACTIVE_1/analytic_20231114/20231114_C3000_003_autoQC01.raw
fn has changed to /srv/www/htdocs//p3000/Proteomics/QEXACTIVE_1/analytic_20231114/20231114_C3000_003_autoQC01.raw
Reading raw file: /srv/www/htdocs//p3000/Proteomics/QEXACTIVE_1/analytic_20231114/20231114_C3000_003_autoQC01.raw
length = 11
Plotting chromatograms ...
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
plot_click: p33171/Proteomics/QEXACTIVE_1/analytic_20231110/20231110_C33171_010_autoQC01.raw
plot_click: p33171/Proteomics/QEXACTIVE_1/analytic_20231110/20231110_C33171_010_autoQC01.raw
fn has changed to /srv/www/htdocs//p33171/Proteomics/QEXACTIVE_1/analytic_20231110/20231110_C33171_010_autoQC01.raw
Reading raw file: /srv/www/htdocs//p33171/Proteomics/QEXACTIVE_1/analytic_20231110/20231110_C33171_010_autoQC01.raw
length = 11
Plotting chromatograms ...
plot_click: p3000/Proteomics/QEXACTIVE_1/analytic_20231114/20231114_C3000_003_autoQC01.raw | plot_click: p3000/Proteomics/QEXACTIVE_1/analytic_20231114/20231114_C3000_003_autoQC01.raw
plot_click: p3000/Proteomics/QEXACTIVE_1/analytic_20231114/20231114_C3000_003_autoQC01.raw | plot_click: p3000/Proteomics/QEXACTIVE_1/analytic_20231114/20231114_C3000_003_autoQC01.raw
fn has changed to /srv/www/htdocs//p3000/Proteomics/QEXACTIVE_1/analytic_20231114/20231114_C3000_003_autoQC01.raw
Reading raw file: /srv/www/htdocs//p3000/Proteomics/QEXACTIVE_1/analytic_20231114/20231114_C3000_003_autoQC01.raw
length = 11
Plotting chromatograms ...
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
plot_click: p33171/Proteomics/QEXACTIVE_1/analytic_20231110/20231110_C33171_010_autoQC01.raw
plot_click: p33171/Proteomics/QEXACTIVE_1/analytic_20231110/20231110_C33171_010_autoQC01.raw
fn has changed to /srv/www/htdocs//p33171/Proteomics/QEXACTIVE_1/analytic_20231110/20231110_C33171_010_autoQC01.raw
Reading raw file: /srv/www/htdocs//p33171/Proteomics/QEXACTIVE_1/analytic_20231110/20231110_C33171_010_autoQC01.raw
length = 11
Plotting chromatograms ...
input timeRange: 7776000 | timeMin: 2023-11-10 11:18:32.813 | timeMax: 2023-11-17 11:18:29.609 | timeDiff: 604796.796000004
autoQC01 module APEX long nrow: 132
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, YILAGVENSK, GTFIIDPGGVIR, GTFIIDPAAVIR, GAGSSEPVTGLDAK, VEATFGVDESNAK, TPVITGAPYEYR, DGLDAASYYAPVR, ADVTPADFSEWSK
AUCAPEX
Warning: Removed 2 rows containing missing values (`geom_point()`).
Warning: Removed 1 row containing missing values (`geom_line()`).
plot_click: p33171/Proteomics/QEXACTIVE_1/analytic_20231110/20231110_C33171_010_autoQC01.raw
Plotting chromatograms ...
Warning: Removed 2 rows containing missing values (`geom_point()`).
Warning: Removed 1 row containing missing values (`geom_line()`).


Execution halted