Listening on http://127.0.0.1:37415

Attaching package: 'shinydashboard'

The following object is masked from 'package:graphics':

    box

Loading required package: readr
Loading required package: reshape2
Loading required package: lattice
Loading required package: rawrr
input timeRange: 7776000 | timeMin: 2023-10-27 15:11:01.146578 | timeMax: 2023-11-17 14:11:01.147233 | timeDiff: 1814400.00065565
Loading required package: bfabricShiny

Attaching package: 'bfabricShiny'

The following object is masked from 'package:base':

    save

autoQC01 module APEX wide nrow: 244574
autoQC01 module APEX long nrow: 333
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUC
Warning: Removed 27 rows containing missing values (`geom_point()`).
input timeRange: 7776000 | timeMin: 2023-10-27 13:11:01.147 | timeMax: 2023-11-17 13:11:01.147 | timeDiff: 1814400
autoQC01 module APEX long nrow: 333
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUCAPEX
Warning: Removed 54 rows containing missing values (`geom_point()`).
cometTimes:1677 | 74659
comet filter length: 0
cometTimes:1677 | 74659
comet filter length: 24
input timeRange: 7776000 | timeMin: 2023-10-27 15:17:36.386698 | timeMax: 2023-11-17 14:17:36.387317 | timeDiff: 1814400.00061846
autoQC01 module APEX wide nrow: 244574
autoQC01 module APEX long nrow: 333
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUC
Warning: Removed 27 rows containing missing values (`geom_point()`).
input timeRange: 7776000 | timeMin: 2023-10-27 13:17:36.387 | timeMax: 2023-11-17 13:17:36.387 | timeDiff: 1814400
autoQC01 module APEX long nrow: 444
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GAGSSEPVTGLDAK
AUC
Warning: Removed 38 rows containing missing values (`geom_point()`).
Warning: Removed 1 row containing missing values (`geom_line()`).
autoQC01 module APEX long nrow: 555
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GAGSSEPVTGLDAK, DGLDAASYYAPVR
AUC
Warning: Removed 43 rows containing missing values (`geom_point()`).
Warning: Removed 1 row containing missing values (`geom_line()`).
autoQC01 module APEX long nrow: 465
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GAGSSEPVTGLDAK, DGLDAASYYAPVR
AUC
Warning: Removed 13 rows containing missing values (`geom_point()`).
Warning: Removed 1 row containing missing values (`geom_line()`).
autoQC01 module APEX long nrow: 372
LGGNEQVTR, TPVISGGPYEYR, GAGSSEPVTGLDAK, DGLDAASYYAPVR
AUC
Warning: Removed 1 rows containing missing values (`geom_point()`).
input timeRange: 7776000 | timeMin: 2023-10-02 13:17:39.853 | timeMax: 2023-11-17 13:17:36.387 | timeDiff: 3974396.53400016
autoQC01 module APEX long nrow: 1104
LGGNEQVTR, TPVISGGPYEYR, GAGSSEPVTGLDAK, DGLDAASYYAPVR
AUC
Warning: Removed 4 rows containing missing values (`geom_point()`).
Warning: Removed 1 row containing missing values (`geom_line()`).
autoQC01 module APEX long nrow: 924
LGGNEQVTR, TPVISGGPYEYR, GAGSSEPVTGLDAK, DGLDAASYYAPVR
AUC
Warning: Removed 27 rows containing missing values (`geom_point()`).
Warning: Removed 1 row containing missing values (`geom_line()`).
autoQC01 module APEX long nrow: 948
LGGNEQVTR, TPVISGGPYEYR, GAGSSEPVTGLDAK, DGLDAASYYAPVR
AUC
Warning: Removed 12 rows containing missing values (`geom_point()`).
Warning: Removed 1 row containing missing values (`geom_line()`).
plot_click: p29369/Proteomics/LUMOS_1/moslu_20231030_20231030_prepretrial_dilution/20231030_002_autoQC01.raw
plot_click: p29369/Proteomics/LUMOS_1/moslu_20231030_20231030_prepretrial_dilution/20231030_002_autoQC01.raw
fn has changed to /srv/www/htdocs//p29369/Proteomics/LUMOS_1/moslu_20231030_20231030_prepretrial_dilution/20231030_002_autoQC01.raw
Reading raw file: /srv/www/htdocs//p29369/Proteomics/LUMOS_1/moslu_20231030_20231030_prepretrial_dilution/20231030_002_autoQC01.raw
length = 4
Plotting chromatograms ...
plot_click: p3000/Proteomics/LUMOS_1/roschi_20231022_DDA_yeast_mouse/20231022_001_autoQC01.raw
plot_click: p3000/Proteomics/LUMOS_1/roschi_20231022_DDA_yeast_mouse/20231022_001_autoQC01.raw
fn has changed to /srv/www/htdocs//p3000/Proteomics/LUMOS_1/roschi_20231022_DDA_yeast_mouse/20231022_001_autoQC01.raw
Reading raw file: /srv/www/htdocs//p3000/Proteomics/LUMOS_1/roschi_20231022_DDA_yeast_mouse/20231022_001_autoQC01.raw
length = 4
Plotting chromatograms ...
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
plot_click: p33276/Proteomics/LUMOS_1/analytic_20231103/20231103_012_autoQC01.raw
plot_click: p33276/Proteomics/LUMOS_1/analytic_20231103/20231103_012_autoQC01.raw
fn has changed to /srv/www/htdocs//p33276/Proteomics/LUMOS_1/analytic_20231103/20231103_012_autoQC01.raw
Reading raw file: /srv/www/htdocs//p33276/Proteomics/LUMOS_1/analytic_20231103/20231103_012_autoQC01.raw
length = 4
Plotting chromatograms ...
plot_click: p3000/Proteomics/LUMOS_1/pgehrig_20231005_autoQC/20231107_21_autoQC01.raw
plot_click: p3000/Proteomics/LUMOS_1/pgehrig_20231005_autoQC/20231107_21_autoQC01.raw
fn has changed to /srv/www/htdocs//p3000/Proteomics/LUMOS_1/pgehrig_20231005_autoQC/20231107_21_autoQC01.raw
Reading raw file: /srv/www/htdocs//p3000/Proteomics/LUMOS_1/pgehrig_20231005_autoQC/20231107_21_autoQC01.raw
length = 4
Plotting chromatograms ...
plot_click: p27367/Proteomics/LUMOS_1/zhouj_20231114/20231114_001_autoQC01.raw
plot_click: p27367/Proteomics/LUMOS_1/zhouj_20231114/20231114_001_autoQC01.raw
fn has changed to /srv/www/htdocs//p27367/Proteomics/LUMOS_1/zhouj_20231114/20231114_001_autoQC01.raw
Reading raw file: /srv/www/htdocs//p27367/Proteomics/LUMOS_1/zhouj_20231114/20231114_001_autoQC01.raw
length = 4
Plotting chromatograms ...
Warning: Using `size` aesthetic for lines was deprecated in ggplot2 3.4.0.
ℹ Please use `linewidth` instead.
Warning: Removed 12 rows containing missing values (`geom_point()`).
Warning: Removed 1 row containing missing values (`geom_line()`).
autoQC01 module APEX long nrow: 948
LGGNEQVTR, TPVISGGPYEYR, GAGSSEPVTGLDAK, DGLDAASYYAPVR
AUC
Warning: Removed 5 rows containing missing values (`geom_point()`).
input timeRange: 7776000 | timeMin: 2023-09-02 13:18:10.701 | timeMax: 2023-11-17 13:17:36.387 | timeDiff: 6566365.68600011
autoQC01 module APEX long nrow: 1332
LGGNEQVTR, TPVISGGPYEYR, GAGSSEPVTGLDAK, DGLDAASYYAPVR
AUC
Warning: Removed 8 rows containing missing values (`geom_point()`).
input timeRange: 7776000 | timeMin: 2023-08-28 13:18:10.701 | timeMax: 2023-11-17 13:17:36.387 | timeDiff: 6998365.68600011
autoQC01 module APEX long nrow: 1356
LGGNEQVTR, TPVISGGPYEYR, GAGSSEPVTGLDAK, DGLDAASYYAPVR
AUC
Warning: Removed 8 rows containing missing values (`geom_point()`).
plot_click: p33326/Proteomics/QEXACTIVE_1/analytic_20231103/20231103_C33326_006_autoQC01.raw
plot_click: p33326/Proteomics/QEXACTIVE_1/analytic_20231103/20231103_C33326_006_autoQC01.raw
fn has changed to /srv/www/htdocs//p33326/Proteomics/QEXACTIVE_1/analytic_20231103/20231103_C33326_006_autoQC01.raw
Reading raw file: /srv/www/htdocs//p33326/Proteomics/QEXACTIVE_1/analytic_20231103/20231103_C33326_006_autoQC01.raw
length = 4
Plotting chromatograms ...
plot_click: p33171/Proteomics/QEXACTIVE_1/analytic_20231110/20231110_C33171_010_autoQC01.raw
plot_click: p33171/Proteomics/QEXACTIVE_1/analytic_20231110/20231110_C33171_010_autoQC01.raw
fn has changed to /srv/www/htdocs//p33171/Proteomics/QEXACTIVE_1/analytic_20231110/20231110_C33171_010_autoQC01.raw
Reading raw file: /srv/www/htdocs//p33171/Proteomics/QEXACTIVE_1/analytic_20231110/20231110_C33171_010_autoQC01.raw
length = 4
Plotting chromatograms ...
plot_click: p33297/Proteomics/QEXACTIVE_1/analytic_20231102/20231102_C33297_001_autoQC01.raw | plot_click: p33310/Proteomics/QEXACTIVE_1/analytic_20231102/20231102_C33310_001_autoQC01.raw
plot_click: p33297/Proteomics/QEXACTIVE_1/analytic_20231102/20231102_C33297_001_autoQC01.raw | plot_click: p33310/Proteomics/QEXACTIVE_1/analytic_20231102/20231102_C33310_001_autoQC01.raw
fn has changed to /srv/www/htdocs//p33297/Proteomics/QEXACTIVE_1/analytic_20231102/20231102_C33297_001_autoQC01.raw
Reading raw file: /srv/www/htdocs//p33297/Proteomics/QEXACTIVE_1/analytic_20231102/20231102_C33297_001_autoQC01.raw
length = 4
Plotting chromatograms ...
plot_click: p33016/Proteomics/QEXACTIVE_1/analytic_20231005/20231005_C33016_006_autoQC01.raw
plot_click: p33016/Proteomics/QEXACTIVE_1/analytic_20231005/20231005_C33016_006_autoQC01.raw
fn has changed to /srv/www/htdocs//p33016/Proteomics/QEXACTIVE_1/analytic_20231005/20231005_C33016_006_autoQC01.raw
Reading raw file: /srv/www/htdocs//p33016/Proteomics/QEXACTIVE_1/analytic_20231005/20231005_C33016_006_autoQC01.raw
length = 4
Plotting chromatograms ...
plot_click: p32831/Proteomics/QEXACTIVE_1/analytic_20230908/20230908_C32831_001_autoQC01.raw
plot_click: p32831/Proteomics/QEXACTIVE_1/analytic_20230908/20230908_C32831_001_autoQC01.raw
fn has changed to /srv/www/htdocs//p32831/Proteomics/QEXACTIVE_1/analytic_20230908/20230908_C32831_001_autoQC01.raw
Reading raw file: /srv/www/htdocs//p32831/Proteomics/QEXACTIVE_1/analytic_20230908/20230908_C32831_001_autoQC01.raw
length = 4
Plotting chromatograms ...
autoQC01 module APEX long nrow: 900
LGGNEQVTR, TPVISGGPYEYR, GAGSSEPVTGLDAK, DGLDAASYYAPVR
AUC
Warning: Removed 56 rows containing missing values (`geom_point()`).
Warning: Removed 1 row containing missing values (`geom_line()`).
plot_click: 
autoQC01 module APEX long nrow: 0
LGGNEQVTR, TPVISGGPYEYR, GAGSSEPVTGLDAK, DGLDAASYYAPVR
AUC
Warning: Error in combine_vars: Faceting variables must have at least one value
  184: <Anonymous>
  183: signalCondition
  182: signal_abort
  181: rlang::abort
  180: cli::cli_abort
  179: combine_vars
  178: compute_layout
  177: self$facet$compute_layout
  176: setup
  175: layout$setup
  174: ggplot_build.ggplot
  172: print.ggplot
  167: func
  165: f
  164: Reduce
  155: do
  154: hybrid_chain
  126: drawPlot
  112: <reactive:plotObj>
   96: drawReactive
   83: renderFunc
   82: output$autoQC01-auc
    1: runApp
autoQC01 module APEX long nrow: 1872
LGGNEQVTR, TPVISGGPYEYR, GAGSSEPVTGLDAK, DGLDAASYYAPVR
AUC
Warning: Removed 76 rows containing missing values (`geom_point()`).
Warning: Removed 3 rows containing missing values (`geom_line()`).
input timeRange: 31536000 | timeMin: 2023-08-28 13:18:10.701 | timeMax: 2023-11-17 14:22:14.757353 | timeDiff: 6998644.05635333
autoQC01 module APEX long nrow: 1872
LGGNEQVTR, TPVISGGPYEYR, GAGSSEPVTGLDAK, DGLDAASYYAPVR
AUC
Warning: Removed 76 rows containing missing values (`geom_point()`).
Warning: Removed 3 rows containing missing values (`geom_line()`).
input timeRange: 31536000 | timeMin: 2023-08-28 13:18:10.701 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 6998644.05599999
autoQC01 module APEX long nrow: 1872
LGGNEQVTR, TPVISGGPYEYR, GAGSSEPVTGLDAK, DGLDAASYYAPVR
AUC
Warning: Removed 76 rows containing missing values (`geom_point()`).
Warning: Removed 3 rows containing missing values (`geom_line()`).
input timeRange: 31536000 | timeMin: 2023-01-03 13:22:15.469 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 27475199.2879999
autoQC01 module APEX long nrow: 5640
LGGNEQVTR, TPVISGGPYEYR, GAGSSEPVTGLDAK, DGLDAASYYAPVR
AUC
Warning: Removed 144 rows containing missing values (`geom_point()`).
input timeRange: 31536000 | timeMin: 2023-01-03 13:22:21.249 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 27475193.5079999
autoQC01 module APEX long nrow: 5640
LGGNEQVTR, TPVISGGPYEYR, GAGSSEPVTGLDAK, DGLDAASYYAPVR
AUC
Warning: Removed 144 rows containing missing values (`geom_point()`).
input timeRange: 31536000 | timeMin: 2023-05-29 13:22:21.249 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 14860793.5079999
autoQC01 module APEX long nrow: 3348
LGGNEQVTR, TPVISGGPYEYR, GAGSSEPVTGLDAK, DGLDAASYYAPVR
AUC
Warning: Removed 122 rows containing missing values (`geom_point()`).
input timeRange: 31536000 | timeMin: 2023-08-26 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 7171161.66000009
autoQC01 module APEX long nrow: 1872
LGGNEQVTR, TPVISGGPYEYR, GAGSSEPVTGLDAK, DGLDAASYYAPVR
AUC
Warning: Removed 76 rows containing missing values (`geom_point()`).
Warning: Removed 3 rows containing missing values (`geom_line()`).
input timeRange: 31536000 | timeMin: 2023-09-02 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 6566361.66000009
autoQC01 module APEX long nrow: 1668
LGGNEQVTR, TPVISGGPYEYR, GAGSSEPVTGLDAK, DGLDAASYYAPVR
AUC
Warning: Removed 73 rows containing missing values (`geom_point()`).
input timeRange: 31536000 | timeMin: 2023-08-26 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 7171161.66000009
autoQC01 module APEX long nrow: 1872
LGGNEQVTR, TPVISGGPYEYR, GAGSSEPVTGLDAK, DGLDAASYYAPVR
AUC
Warning: Removed 76 rows containing missing values (`geom_point()`).
Warning: Removed 3 rows containing missing values (`geom_line()`).
input timeRange: 31536000 | timeMin: 2023-09-02 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 6566361.66000009
autoQC01 module APEX long nrow: 1668
LGGNEQVTR, TPVISGGPYEYR, GAGSSEPVTGLDAK, DGLDAASYYAPVR
AUC
Warning: Removed 73 rows containing missing values (`geom_point()`).
autoQC01 module APEX long nrow: 1872
LGGNEQVTR, TPVISGGPYEYR, GAGSSEPVTGLDAK, DGLDAASYYAPVR
AUC
Warning: Removed 76 rows containing missing values (`geom_point()`).
Warning: Removed 3 rows containing missing values (`geom_line()`).
input timeRange: 31536000 | timeMin: 2023-08-26 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 7171161.66000009
autoQC01 module APEX long nrow: 1668
LGGNEQVTR, TPVISGGPYEYR, GAGSSEPVTGLDAK, DGLDAASYYAPVR
AUC
Warning: Removed 73 rows containing missing values (`geom_point()`).
input timeRange: 31536000 | timeMin: 2023-09-02 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 6566361.66000009
autoQC01 module APEX long nrow: 1872
LGGNEQVTR, TPVISGGPYEYR, GAGSSEPVTGLDAK, DGLDAASYYAPVR
AUC
Warning: Removed 76 rows containing missing values (`geom_point()`).
Warning: Removed 3 rows containing missing values (`geom_line()`).
input timeRange: 31536000 | timeMin: 2023-08-26 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 7171161.66000009
autoQC01 module APEX long nrow: 1668
LGGNEQVTR, TPVISGGPYEYR, GAGSSEPVTGLDAK, DGLDAASYYAPVR
AUC
Warning: Removed 73 rows containing missing values (`geom_point()`).
input timeRange: 31536000 | timeMin: 2023-09-02 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 6566361.66000009
autoQC01 module APEX long nrow: 1872
LGGNEQVTR, TPVISGGPYEYR, GAGSSEPVTGLDAK, DGLDAASYYAPVR
AUC
Warning: Removed 76 rows containing missing values (`geom_point()`).
Warning: Removed 3 rows containing missing values (`geom_line()`).
input timeRange: 31536000 | timeMin: 2023-08-26 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 7171161.66000009
autoQC01 module APEX long nrow: 1668
LGGNEQVTR, TPVISGGPYEYR, GAGSSEPVTGLDAK, DGLDAASYYAPVR
AUC
Warning: Removed 73 rows containing missing values (`geom_point()`).
input timeRange: 31536000 | timeMin: 2023-09-02 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 6566361.66000009
autoQC01 module APEX long nrow: 1872
LGGNEQVTR, TPVISGGPYEYR, GAGSSEPVTGLDAK, DGLDAASYYAPVR
AUC
Warning: Removed 76 rows containing missing values (`geom_point()`).
Warning: Removed 3 rows containing missing values (`geom_line()`).
input timeRange: 31536000 | timeMin: 2023-08-26 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 7171161.66000009
autoQC01 module APEX long nrow: 1668
LGGNEQVTR, TPVISGGPYEYR, GAGSSEPVTGLDAK, DGLDAASYYAPVR
AUC
Warning: Removed 73 rows containing missing values (`geom_point()`).
input timeRange: 31536000 | timeMin: 2023-09-02 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 6566361.66000009
autoQC01 module APEX long nrow: 1872
LGGNEQVTR, TPVISGGPYEYR, GAGSSEPVTGLDAK, DGLDAASYYAPVR
AUC
Warning: Removed 76 rows containing missing values (`geom_point()`).
Warning: Removed 3 rows containing missing values (`geom_line()`).
input timeRange: 31536000 | timeMin: 2023-08-26 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 7171161.66000009
autoQC01 module APEX long nrow: 1668
LGGNEQVTR, TPVISGGPYEYR, GAGSSEPVTGLDAK, DGLDAASYYAPVR
AUC
Warning: Removed 73 rows containing missing values (`geom_point()`).
input timeRange: 31536000 | timeMin: 2023-09-02 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 6566361.66000009
autoQC01 module APEX long nrow: 1872
LGGNEQVTR, TPVISGGPYEYR, GAGSSEPVTGLDAK, DGLDAASYYAPVR
AUC
Warning: Removed 76 rows containing missing values (`geom_point()`).
Warning: Removed 3 rows containing missing values (`geom_line()`).
input timeRange: 31536000 | timeMin: 2023-08-26 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 7171161.66000009
autoQC01 module APEX long nrow: 1668
LGGNEQVTR, TPVISGGPYEYR, GAGSSEPVTGLDAK, DGLDAASYYAPVR
AUC
Warning: Removed 73 rows containing missing values (`geom_point()`).
input timeRange: 31536000 | timeMin: 2023-09-02 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 6566361.66000009
autoQC01 module APEX long nrow: 1872
LGGNEQVTR, TPVISGGPYEYR, GAGSSEPVTGLDAK, DGLDAASYYAPVR
AUC
Warning: Removed 76 rows containing missing values (`geom_point()`).
Warning: Removed 3 rows containing missing values (`geom_line()`).
input timeRange: 31536000 | timeMin: 2023-08-26 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 7171161.66000009
autoQC01 module APEX long nrow: 1668
LGGNEQVTR, TPVISGGPYEYR, GAGSSEPVTGLDAK, DGLDAASYYAPVR
AUC
Warning: Removed 73 rows containing missing values (`geom_point()`).
input timeRange: 31536000 | timeMin: 2023-09-02 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 6566361.66000009
autoQC01 module APEX long nrow: 1872
LGGNEQVTR, TPVISGGPYEYR, GAGSSEPVTGLDAK, DGLDAASYYAPVR
AUC
Warning: Removed 76 rows containing missing values (`geom_point()`).
Warning: Removed 3 rows containing missing values (`geom_line()`).
input timeRange: 31536000 | timeMin: 2023-08-26 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 7171161.66000009
autoQC01 module APEX long nrow: 1668
LGGNEQVTR, TPVISGGPYEYR, GAGSSEPVTGLDAK, DGLDAASYYAPVR
AUC
Warning: Removed 73 rows containing missing values (`geom_point()`).
input timeRange: 31536000 | timeMin: 2023-09-02 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 6566361.66000009
autoQC01 module APEX long nrow: 1872
LGGNEQVTR, TPVISGGPYEYR, GAGSSEPVTGLDAK, DGLDAASYYAPVR
AUC
Warning: Removed 76 rows containing missing values (`geom_point()`).
Warning: Removed 3 rows containing missing values (`geom_line()`).
input timeRange: 31536000 | timeMin: 2023-08-26 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 7171161.66000009
autoQC01 module APEX long nrow: 1668
LGGNEQVTR, TPVISGGPYEYR, GAGSSEPVTGLDAK, DGLDAASYYAPVR
AUC
Warning: Removed 73 rows containing missing values (`geom_point()`).
input timeRange: 31536000 | timeMin: 2023-09-02 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 6566361.66000009
autoQC01 module APEX long nrow: 1872
LGGNEQVTR, TPVISGGPYEYR, GAGSSEPVTGLDAK, DGLDAASYYAPVR
AUC
Warning: Removed 76 rows containing missing values (`geom_point()`).
Warning: Removed 3 rows containing missing values (`geom_line()`).
input timeRange: 31536000 | timeMin: 2023-08-26 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 7171161.66000009
autoQC01 module APEX long nrow: 1668
LGGNEQVTR, TPVISGGPYEYR, GAGSSEPVTGLDAK, DGLDAASYYAPVR
AUC
Warning: Removed 73 rows containing missing values (`geom_point()`).
input timeRange: 31536000 | timeMin: 2023-09-02 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 6566361.66000009
autoQC01 module APEX long nrow: 1872
LGGNEQVTR, TPVISGGPYEYR, GAGSSEPVTGLDAK, DGLDAASYYAPVR
AUC
Warning: Removed 76 rows containing missing values (`geom_point()`).
Warning: Removed 3 rows containing missing values (`geom_line()`).
input timeRange: 31536000 | timeMin: 2023-08-26 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 7171161.66000009
autoQC01 module APEX long nrow: 1668
LGGNEQVTR, TPVISGGPYEYR, GAGSSEPVTGLDAK, DGLDAASYYAPVR
AUC
Warning: Removed 73 rows containing missing values (`geom_point()`).
input timeRange: 31536000 | timeMin: 2023-09-02 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 6566361.66000009
autoQC01 module APEX long nrow: 1872
LGGNEQVTR, TPVISGGPYEYR, GAGSSEPVTGLDAK, DGLDAASYYAPVR
AUC
Warning: Removed 76 rows containing missing values (`geom_point()`).
Warning: Removed 3 rows containing missing values (`geom_line()`).
input timeRange: 31536000 | timeMin: 2023-08-26 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 7171161.66000009
autoQC01 module APEX long nrow: 1668
LGGNEQVTR, TPVISGGPYEYR, GAGSSEPVTGLDAK, DGLDAASYYAPVR
AUC
Warning: Removed 73 rows containing missing values (`geom_point()`).
input timeRange: 31536000 | timeMin: 2023-09-02 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 6566361.66000009
autoQC01 module APEX long nrow: 1872
LGGNEQVTR, TPVISGGPYEYR, GAGSSEPVTGLDAK, DGLDAASYYAPVR
AUC
Warning: Removed 76 rows containing missing values (`geom_point()`).
Warning: Removed 3 rows containing missing values (`geom_line()`).
input timeRange: 31536000 | timeMin: 2023-08-26 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 7171161.66000009
autoQC01 module APEX long nrow: 1668
LGGNEQVTR, TPVISGGPYEYR, GAGSSEPVTGLDAK, DGLDAASYYAPVR
AUC
Warning: Removed 73 rows containing missing values (`geom_point()`).
input timeRange: 31536000 | timeMin: 2023-09-02 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 6566361.66000009
autoQC01 module APEX long nrow: 1872
LGGNEQVTR, TPVISGGPYEYR, GAGSSEPVTGLDAK, DGLDAASYYAPVR
AUC
Warning: Removed 76 rows containing missing values (`geom_point()`).
Warning: Removed 3 rows containing missing values (`geom_line()`).
input timeRange: 31536000 | timeMin: 2023-08-26 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 7171161.66000009
autoQC01 module APEX long nrow: 1668
LGGNEQVTR, TPVISGGPYEYR, GAGSSEPVTGLDAK, DGLDAASYYAPVR
AUC
Warning: Removed 73 rows containing missing values (`geom_point()`).
input timeRange: 31536000 | timeMin: 2023-09-02 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 6566361.66000009
autoQC01 module APEX long nrow: 1872
LGGNEQVTR, TPVISGGPYEYR, GAGSSEPVTGLDAK, DGLDAASYYAPVR
AUC
Warning: Removed 76 rows containing missing values (`geom_point()`).
Warning: Removed 3 rows containing missing values (`geom_line()`).
input timeRange: 31536000 | timeMin: 2023-08-26 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 7171161.66000009
cometTimes:5720 | 74659
comet filter length: 0
input timeRange: 31536000 | timeMin: 2023-09-02 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 6566361.66000009
cometTimes:5343 | 74659
comet filter length: 0
input timeRange: 31536000 | timeMin: 2023-08-26 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 7171161.66000009
cometTimes:5720 | 74659
comet filter length: 0
cometTimes:5720 | 74659
comet filter length: 96
cometTimes:5343 | 74659
comet filter length: 93
input timeRange: 31536000 | timeMin: 2023-09-02 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 6566361.66000009
cometTimes:5720 | 74659
comet filter length: 96
input timeRange: 31536000 | timeMin: 2023-08-26 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 7171161.66000009
cometTimes:5343 | 74659
comet filter length: 93
input timeRange: 31536000 | timeMin: 2023-09-02 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 6566361.66000009
cometTimes:5720 | 74659
comet filter length: 96
input timeRange: 31536000 | timeMin: 2023-08-26 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 7171161.66000009
cometTimes:5343 | 74659
comet filter length: 93
input timeRange: 31536000 | timeMin: 2023-09-02 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 6566361.66000009
cometTimes:5720 | 74659
comet filter length: 96
input timeRange: 31536000 | timeMin: 2023-08-26 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 7171161.66000009
cometTimes:5343 | 74659
comet filter length: 93
input timeRange: 31536000 | timeMin: 2023-09-02 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 6566361.66000009
cometTimes:5720 | 74659
comet filter length: 96
input timeRange: 31536000 | timeMin: 2023-08-26 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 7171161.66000009
cometTimes:5343 | 74659
comet filter length: 93
input timeRange: 31536000 | timeMin: 2023-09-02 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 6566361.66000009
cometTimes:5720 | 74659
comet filter length: 96
input timeRange: 31536000 | timeMin: 2023-08-26 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 7171161.66000009
cometTimes:5343 | 74659
comet filter length: 93
input timeRange: 31536000 | timeMin: 2023-09-02 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 6566361.66000009
cometTimes:5720 | 74659
comet filter length: 96
input timeRange: 31536000 | timeMin: 2023-08-26 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 7171161.66000009
cometTimes:5343 | 74659
comet filter length: 93
input timeRange: 31536000 | timeMin: 2023-09-02 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 6566361.66000009
cometTimes:5720 | 74659
comet filter length: 96
input timeRange: 31536000 | timeMin: 2023-08-26 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 7171161.66000009
cometTimes:5343 | 74659
comet filter length: 93
input timeRange: 31536000 | timeMin: 2023-09-02 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 6566361.66000009
cometTimes:5720 | 74659
comet filter length: 96
input timeRange: 31536000 | timeMin: 2023-08-26 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 7171161.66000009
cometTimes:5343 | 74659
comet filter length: 93
input timeRange: 31536000 | timeMin: 2023-09-02 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 6566361.66000009
cometTimes:5720 | 74659
comet filter length: 96
input timeRange: 31536000 | timeMin: 2023-08-26 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 7171161.66000009
cometTimes:5343 | 74659
comet filter length: 93
input timeRange: 31536000 | timeMin: 2023-09-02 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 6566361.66000009
cometTimes:5720 | 74659
comet filter length: 96
input timeRange: 31536000 | timeMin: 2023-08-26 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 7171161.66000009
cometTimes:5343 | 74659
comet filter length: 93
input timeRange: 31536000 | timeMin: 2023-09-02 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 6566361.66000009
cometTimes:5720 | 74659
comet filter length: 96
input timeRange: 31536000 | timeMin: 2023-08-26 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 7171161.66000009
cometTimes:5343 | 74659
comet filter length: 93
input timeRange: 31536000 | timeMin: 2023-09-02 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 6566361.66000009
cometTimes:5720 | 74659
comet filter length: 96
input timeRange: 31536000 | timeMin: 2023-08-26 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 7171161.66000009
cometTimes:5343 | 74659
comet filter length: 93
input timeRange: 31536000 | timeMin: 2023-09-02 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 6566361.66000009
cometTimes:5720 | 74659
comet filter length: 96
input timeRange: 31536000 | timeMin: 2023-08-26 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 7171161.66000009
cometTimes:5343 | 74659
comet filter length: 93
input timeRange: 31536000 | timeMin: 2023-09-02 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 6566361.66000009
cometTimes:5720 | 74659
comet filter length: 96
input timeRange: 31536000 | timeMin: 2023-08-26 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 7171161.66000009
cometTimes:5343 | 74659
comet filter length: 93
input timeRange: 31536000 | timeMin: 2023-09-02 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 6566361.66000009
cometTimes:5720 | 74659
comet filter length: 96
input timeRange: 31536000 | timeMin: 2023-08-26 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 7171161.66000009
cometTimes:5343 | 74659
comet filter length: 93
input timeRange: 31536000 | timeMin: 2023-09-02 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 6566361.66000009
cometTimes:5720 | 74659
comet filter length: 96
input timeRange: 31536000 | timeMin: 2023-08-26 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 7171161.66000009
cometTimes:5343 | 74659
comet filter length: 93
input timeRange: 31536000 | timeMin: 2023-09-02 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 6566361.66000009
cometTimes:5720 | 74659
comet filter length: 96
input timeRange: 31536000 | timeMin: 2023-08-26 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 7171161.66000009
cometTimes:5343 | 74659
comet filter length: 93
input timeRange: 31536000 | timeMin: 2023-09-02 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 6566361.66000009
cometTimes:5720 | 74659
comet filter length: 96
input timeRange: 31536000 | timeMin: 2023-08-26 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 7171161.66000009
cometTimes:5343 | 74659
comet filter length: 93
input timeRange: 31536000 | timeMin: 2023-09-02 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 6566361.66000009
cometTimes:5720 | 74659
comet filter length: 96
input timeRange: 31536000 | timeMin: 2023-08-26 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 7171161.66000009
cometTimes:5343 | 74659
comet filter length: 93
input timeRange: 31536000 | timeMin: 2023-09-02 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 6566361.66000009
cometTimes:5720 | 74659
comet filter length: 96
input timeRange: 31536000 | timeMin: 2023-08-26 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 7171161.66000009
cometTimes:5343 | 74659
comet filter length: 93
input timeRange: 31536000 | timeMin: 2023-09-02 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 6566361.66000009
cometTimes:5720 | 74659
comet filter length: 96
input timeRange: 31536000 | timeMin: 2023-08-26 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 7171161.66000009
cometTimes:5343 | 74659
comet filter length: 93
input timeRange: 31536000 | timeMin: 2023-09-02 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 6566361.66000009
cometTimes:5720 | 74659
comet filter length: 96
input timeRange: 31536000 | timeMin: 2023-08-26 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 7171161.66000009
cometTimes:5343 | 74659
comet filter length: 93
input timeRange: 31536000 | timeMin: 2023-09-02 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 6566361.66000009
cometTimes:5720 | 74659
comet filter length: 96
input timeRange: 31536000 | timeMin: 2023-08-26 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 7171161.66000009
cometTimes:5343 | 74659
comet filter length: 93
input timeRange: 31536000 | timeMin: 2023-09-02 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 6566361.66000009
cometTimes:5720 | 74659
comet filter length: 96
input timeRange: 31536000 | timeMin: 2023-08-26 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 7171161.66000009
cometTimes:5343 | 74659
comet filter length: 93
input timeRange: 31536000 | timeMin: 2023-09-02 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 6566361.66000009
cometTimes:5720 | 74659
comet filter length: 96
input timeRange: 31536000 | timeMin: 2023-08-26 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 7171161.66000009
cometTimes:5343 | 74659
comet filter length: 93
input timeRange: 31536000 | timeMin: 2023-09-02 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 6566361.66000009
cometTimes:5720 | 74659
comet filter length: 96
input timeRange: 31536000 | timeMin: 2023-08-26 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 7171161.66000009
cometTimes:5343 | 74659
comet filter length: 93
input timeRange: 31536000 | timeMin: 2023-09-02 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 6566361.66000009
cometTimes:5720 | 74659
comet filter length: 96
input timeRange: 31536000 | timeMin: 2023-08-26 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 7171161.66000009
cometTimes:5343 | 74659
comet filter length: 93
input timeRange: 31536000 | timeMin: 2023-09-02 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 6566361.66000009
cometTimes:5720 | 74659
comet filter length: 96
input timeRange: 31536000 | timeMin: 2023-08-26 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 7171161.66000009
cometTimes:5343 | 74659
comet filter length: 93
input timeRange: 31536000 | timeMin: 2023-09-02 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 6566361.66000009
cometTimes:5720 | 74659
comet filter length: 96
input timeRange: 31536000 | timeMin: 2023-08-26 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 7171161.66000009
cometTimes:5343 | 74659
comet filter length: 93
input timeRange: 31536000 | timeMin: 2023-09-02 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 6566361.66000009
cometTimes:5720 | 74659
comet filter length: 96
input timeRange: 31536000 | timeMin: 2023-08-26 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 7171161.66000009
cometTimes:5343 | 74659
comet filter length: 93
input timeRange: 31536000 | timeMin: 2023-09-02 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 6566361.66000009
cometTimes:5720 | 74659
comet filter length: 96
input timeRange: 31536000 | timeMin: 2023-08-26 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 7171161.66000009
cometTimes:5343 | 74659
comet filter length: 93
input timeRange: 31536000 | timeMin: 2023-09-02 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 6566361.66000009
cometTimes:5720 | 74659
comet filter length: 96
input timeRange: 31536000 | timeMin: 2023-08-26 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 7171161.66000009
cometTimes:5343 | 74659
comet filter length: 93
input timeRange: 31536000 | timeMin: 2023-09-02 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 6566361.66000009
cometTimes:5720 | 74659
comet filter length: 96
input timeRange: 31536000 | timeMin: 2023-08-26 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 7171161.66000009
cometTimes:5343 | 74659
comet filter length: 93
input timeRange: 31536000 | timeMin: 2023-09-02 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 6566361.66000009
cometTimes:5720 | 74659
comet filter length: 96
input timeRange: 31536000 | timeMin: 2023-08-26 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 7171161.66000009
cometTimes:5343 | 74659
comet filter length: 93
input timeRange: 31536000 | timeMin: 2023-09-02 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 6566361.66000009
cometTimes:5720 | 74659
comet filter length: 96
input timeRange: 31536000 | timeMin: 2023-08-26 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 7171161.66000009
cometTimes:5343 | 74659
comet filter length: 93
input timeRange: 31536000 | timeMin: 2023-09-02 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 6566361.66000009
cometTimes:5720 | 74659
comet filter length: 96
input timeRange: 31536000 | timeMin: 2023-08-26 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 7171161.66000009
cometTimes:5343 | 74659
comet filter length: 93
input timeRange: 31536000 | timeMin: 2023-09-02 13:22:53.097 | timeMax: 2023-11-17 13:22:14.757 | timeDiff: 6566361.66000009
input timeRange: 7776000 | timeMin: 2023-10-27 15:23:28.600959 | timeMax: 2023-11-17 14:23:28.601586 | timeDiff: 1814400.00062704
autoQC01 module APEX wide nrow: 244574
autoQC01 module APEX long nrow: 333
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUC
Warning: Removed 27 rows containing missing values (`geom_point()`).
input timeRange: 7776000 | timeMin: 2023-10-27 13:23:28.601 | timeMax: 2023-11-17 13:23:28.602 | timeDiff: 1814400.00099993
autoQC01 module APEX long nrow: 1341
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUC
Warning: Removed 69 rows containing missing values (`geom_point()`).
input timeRange: 7776000 | timeMin: 2023-08-31 13:23:31.723 | timeMax: 2023-11-17 13:23:28.602 | timeDiff: 6739196.87899995
cometTimes:5473 | 74659
comet filter length: 0
cometTimes:5473 | 74659
comet filter length: 93
cometTimes:5473 | 74659
comet filter length: 69
Warning in observe() : timeDiff is higher than timeRange
Warning in observe() : timeDiff is higher than timeRange
input timeRange: 7776000 | timeMin: 2023-08-24 13:23:47.557 | timeMax: 2023-11-17 13:23:28.602 | timeDiff: 7343981.04500008
cometTimes:5902 | 74659
comet filter length: 75
cometTimes:5902 | 74659
comet filter length: 372
cometTimes:5902 | 74659
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cometTimes:5902 | 74659
comet filter length: 75
cometTimes:5902 | 74659
comet filter length: 99
cometTimes:5902 | 74659
comet filter length: 75
cometTimes:5902 | 74659
comet filter length: 192
input timeRange: 7776000 | timeMin: 2023-10-27 15:50:44.015813 | timeMax: 2023-11-17 14:50:44.016469 | timeDiff: 1814400.00065589
autoQC01 module APEX wide nrow: 244574
autoQC01 module APEX long nrow: 333
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUC
Warning: Removed 27 rows containing missing values (`geom_point()`).
input timeRange: 7776000 | timeMin: 2023-10-27 13:50:44.016 | timeMax: 2023-11-17 13:50:44.016 | timeDiff: 1814400
input timeRange: 7776000 | timeMin: 2023-10-27 15:53:25.801179 | timeMax: 2023-11-17 14:53:25.801825 | timeDiff: 1814400.00064588
autoQC01 module APEX wide nrow: 244574
autoQC01 module APEX long nrow: 333
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUC
Warning: Removed 27 rows containing missing values (`geom_point()`).
input timeRange: 7776000 | timeMin: 2023-10-27 13:53:25.801 | timeMax: 2023-11-17 13:53:25.802 | timeDiff: 1814400.00099993
autoQC01 module APEX long nrow: 243
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUC
Warning: Removed 23 rows containing missing values (`geom_point()`).
input timeRange: 7776000 | timeMin: 2023-10-27 13:53:25.801 | timeMax: 2023-11-17 13:53:29.27195 | timeDiff: 1814403.47094989
autoQC01 module APEX long nrow: 243
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUC
Warning: Removed 23 rows containing missing values (`geom_point()`).
input timeRange: 7776000 | timeMin: 2023-10-27 13:53:25.801 | timeMax: 2023-11-17 13:53:29.272 | timeDiff: 1814403.47099996
autoQC01 module APEX long nrow: 243
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUC
Warning: Removed 23 rows containing missing values (`geom_point()`).
plot_click: p3000/Proteomics/LUMOS_2/roschi_20231113_DIA_K562/20231113_012_autoQC01.raw
plot_click: p3000/Proteomics/LUMOS_2/roschi_20231113_DIA_K562/20231113_012_autoQC01.raw
fn has changed to /srv/www/htdocs//p3000/Proteomics/LUMOS_2/roschi_20231113_DIA_K562/20231113_012_autoQC01.raw
Reading raw file: /srv/www/htdocs//p3000/Proteomics/LUMOS_2/roschi_20231113_DIA_K562/20231113_012_autoQC01.raw
length = 3
Plotting chromatograms ...
input timeRange: 7776000 | timeMin: 2023-10-27 15:54:25.42963 | timeMax: 2023-11-17 14:54:25.430299 | timeDiff: 1814400.00066876
autoQC01 module APEX wide nrow: 244574
autoQC01 module APEX long nrow: 333
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUC
Warning: Removed 27 rows containing missing values (`geom_point()`).
input timeRange: 7776000 | timeMin: 2023-10-27 13:54:25.43 | timeMax: 2023-11-17 13:54:25.43 | timeDiff: 1814400
Warning in observe() : timeDiff is higher than timeRange
input timeRange: 7776000 | timeMin: 2023-10-27 15:55:17.283261 | timeMax: 2023-11-17 14:55:17.283909 | timeDiff: 1814400.00064778
autoQC01 module APEX wide nrow: 244574
autoQC01 module APEX long nrow: 333
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUC
Warning: Removed 27 rows containing missing values (`geom_point()`).
input timeRange: 7776000 | timeMin: 2023-10-27 13:55:17.283 | timeMax: 2023-11-17 13:55:17.284 | timeDiff: 1814400.00099993
cometTimes:1677 | 74659
comet filter length: 0
Warning: Error in if: argument is of length zero
  97: renderUI [/export/data01/scratch/DIAQC/qc/inst/shiny/fgczmsqc-dashboard/server.R#470]
  96: func
  83: renderFunc
  82: output$fileOutput
   1: runApp
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
autoQC01 module APEX long nrow: 243
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUCFWHM
Warning: Removed 46 rows containing missing values (`geom_point()`).
input timeRange: 7776000 | timeMin: 2023-10-27 13:53:40.873 | timeMax: 2023-11-17 13:53:44.34393 | timeDiff: 1814403.4709301
autoQC01 module APEX long nrow: 243
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUCFWHM
Warning: Removed 46 rows containing missing values (`geom_point()`).
input timeRange: 7776000 | timeMin: 2023-10-27 13:53:40.873 | timeMax: 2023-11-17 13:53:44.344 | timeDiff: 1814403.47100019
autoQC01 module APEX long nrow: 243
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUCFWHM
Warning: Removed 46 rows containing missing values (`geom_point()`).
input timeRange: 7776000 | timeMin: 2023-11-08 13:58:06.637 | timeMax: 2023-11-17 13:53:44.344 | timeDiff: 777337.707000017
autoQC01 module APEX long nrow: 63
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUCFWHM
Warning: Removed 8 rows containing missing values (`geom_point()`).
Warning: Removed 1 row containing missing values (`geom_line()`).
cometTimes:637 | 74659
comet filter length: 0
Warning: Error in graphics::plot.new: figure margins too large
  130: graphics::plot.new
  127: startPNG
  126: drawPlot
  112: <reactive:plotObj>
   96: drawReactive
   83: renderFunc
   82: output$plotTIC
    1: runApp
Warning: Error in graphics::plot.new: figure margins too large
  130: graphics::plot.new
  127: startPNG
  126: drawPlot
  112: <reactive:plotObj>
   96: drawReactive
   83: renderFunc
   82: output$plotTIC
    1: runApp
Warning: Removed 8 rows containing missing values (`geom_point()`).
Warning: Removed 1 row containing missing values (`geom_line()`).
cometTimes:637 | 74659
comet filter length: 24
Warning: Error in graphics::plot.new: figure margins too large
  130: graphics::plot.new
  127: startPNG
  126: drawPlot
  112: <reactive:plotObj>
   96: drawReactive
   83: renderFunc
   82: output$plotTIC
    1: runApp
input timeRange: 1209600 | timeMin: 2023-10-27 16:24:53.715483 | timeMax: 2023-11-17 15:24:53.737426 | timeDiff: 1814400.02194309
cometTimes:1677 | 74659
comet filter length: 48
autoQC01 module APEX long nrow: 243
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUCFWHM
Warning: Removed 46 rows containing missing values (`geom_point()`).
input timeRange: 1209600 | timeMin: 2023-11-03 15:24:58.708453 | timeMax: 2023-11-17 15:24:53.737426 | timeDiff: 1209595.02897263
autoQC01 module APEX long nrow: 162
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUCFWHM
Warning: Removed 28 rows containing missing values (`geom_point()`).
Warning: Removed 8 rows containing missing values (`geom_line()`).
input timeRange: 1209600 | timeMin: 2023-11-03 14:24:58.708 | timeMax: 2023-11-17 14:24:53.737 | timeDiff: 1209595.02900004
autoQC01 module APEX long nrow: 162
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUCFWHM
Warning: Removed 28 rows containing missing values (`geom_point()`).
Warning: Removed 8 rows containing missing values (`geom_line()`).
input timeRange: 1209600 | timeMin: 2023-11-03 15:25:00.191335 | timeMax: 2023-11-17 14:24:53.737 | timeDiff: 1209593.54566455
autoQC01 module APEX long nrow: 162
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUCFWHM
Warning: Removed 28 rows containing missing values (`geom_point()`).
Warning: Removed 8 rows containing missing values (`geom_line()`).
input timeRange: 1209600 | timeMin: 2023-11-03 14:25:00.191 | timeMax: 2023-11-17 14:24:53.737 | timeDiff: 1209593.546
autoQC01 module APEX long nrow: 162
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUCFWHM
Warning: Removed 28 rows containing missing values (`geom_point()`).
Warning: Removed 8 rows containing missing values (`geom_line()`).
input timeRange: 1209600 | timeMin: 2023-11-03 15:25:01.321663 | timeMax: 2023-11-17 14:24:53.737 | timeDiff: 1209592.41533732
autoQC01 module APEX long nrow: 162
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUCFWHM
Warning: Removed 28 rows containing missing values (`geom_point()`).
Warning: Removed 8 rows containing missing values (`geom_line()`).
input timeRange: 1209600 | timeMin: 2023-11-03 14:25:01.322 | timeMax: 2023-11-17 14:24:53.737 | timeDiff: 1209592.41499996
autoQC01 module APEX long nrow: 162
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUCFWHM
Warning: Removed 28 rows containing missing values (`geom_point()`).
Warning: Removed 8 rows containing missing values (`geom_line()`).
input timeRange: 1209600 | timeMin: 2023-11-03 15:25:02.496982 | timeMax: 2023-11-17 14:24:53.737 | timeDiff: 1209591.24001813
autoQC01 module APEX long nrow: 162
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUCFWHM
Warning: Removed 28 rows containing missing values (`geom_point()`).
Warning: Removed 8 rows containing missing values (`geom_line()`).
input timeRange: 1209600 | timeMin: 2023-11-03 14:25:02.497 | timeMax: 2023-11-17 14:24:53.737 | timeDiff: 1209591.24000001
autoQC01 module APEX long nrow: 162
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUCFWHM
Warning: Removed 28 rows containing missing values (`geom_point()`).
Warning: Removed 8 rows containing missing values (`geom_line()`).
input timeRange: 1209600 | timeMin: 2023-11-03 15:25:03.619683 | timeMax: 2023-11-17 14:24:53.737 | timeDiff: 1209590.11731744
autoQC01 module APEX long nrow: 162
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUCFWHM
Warning: Removed 28 rows containing missing values (`geom_point()`).
Warning: Removed 8 rows containing missing values (`geom_line()`).
input timeRange: 1209600 | timeMin: 2023-11-03 14:25:03.62 | timeMax: 2023-11-17 14:24:53.737 | timeDiff: 1209590.1170001
autoQC01 module APEX long nrow: 162
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUCFWHM
Warning: Removed 28 rows containing missing values (`geom_point()`).
Warning: Removed 8 rows containing missing values (`geom_line()`).
input timeRange: 1209600 | timeMin: 2023-11-03 15:25:04.748362 | timeMax: 2023-11-17 14:24:53.737 | timeDiff: 1209588.98863769
autoQC01 module APEX long nrow: 162
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUCFWHM
Warning: Removed 28 rows containing missing values (`geom_point()`).
Warning: Removed 8 rows containing missing values (`geom_line()`).
input timeRange: 1209600 | timeMin: 2023-11-03 14:25:04.748 | timeMax: 2023-11-17 14:24:53.737 | timeDiff: 1209588.98900008
autoQC01 module APEX long nrow: 162
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUCFWHM
Warning: Removed 28 rows containing missing values (`geom_point()`).
Warning: Removed 8 rows containing missing values (`geom_line()`).
input timeRange: 1209600 | timeMin: 2023-11-03 15:25:05.863454 | timeMax: 2023-11-17 14:24:53.737 | timeDiff: 1209587.87354636
autoQC01 module APEX long nrow: 162
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUCFWHM
Warning: Removed 28 rows containing missing values (`geom_point()`).
Warning: Removed 8 rows containing missing values (`geom_line()`).
input timeRange: 1209600 | timeMin: 2023-11-03 14:25:05.863 | timeMax: 2023-11-17 14:24:53.737 | timeDiff: 1209587.87400007
autoQC01 module APEX long nrow: 162
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUCFWHM
Warning: Removed 28 rows containing missing values (`geom_point()`).
Warning: Removed 8 rows containing missing values (`geom_line()`).
input timeRange: 1209600 | timeMin: 2023-11-03 15:25:07.035164 | timeMax: 2023-11-17 14:24:53.737 | timeDiff: 1209586.70183635
autoQC01 module APEX long nrow: 162
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUCFWHM
Warning: Removed 28 rows containing missing values (`geom_point()`).
Warning: Removed 8 rows containing missing values (`geom_line()`).
input timeRange: 1209600 | timeMin: 2023-11-03 14:25:07.035 | timeMax: 2023-11-17 14:24:53.737 | timeDiff: 1209586.7019999
autoQC01 module APEX long nrow: 162
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUCFWHM
Warning: Removed 28 rows containing missing values (`geom_point()`).
Warning: Removed 8 rows containing missing values (`geom_line()`).
input timeRange: 1209600 | timeMin: 2023-11-03 15:25:08.156524 | timeMax: 2023-11-17 14:24:53.737 | timeDiff: 1209585.58047581
autoQC01 module APEX long nrow: 162
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUCFWHM
Warning: Removed 28 rows containing missing values (`geom_point()`).
Warning: Removed 8 rows containing missing values (`geom_line()`).
input timeRange: 1209600 | timeMin: 2023-11-03 14:25:08.157 | timeMax: 2023-11-17 14:24:53.737 | timeDiff: 1209585.57999992
autoQC01 module APEX long nrow: 162
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUCFWHM
Warning: Removed 28 rows containing missing values (`geom_point()`).
Warning: Removed 8 rows containing missing values (`geom_line()`).
input timeRange: 1209600 | timeMin: 2023-11-03 15:25:09.4016 | timeMax: 2023-11-17 14:24:53.737 | timeDiff: 1209584.33540034
autoQC01 module APEX long nrow: 162
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUCFWHM
Warning: Removed 28 rows containing missing values (`geom_point()`).
Warning: Removed 8 rows containing missing values (`geom_line()`).
input timeRange: 1209600 | timeMin: 2023-11-03 14:25:09.402 | timeMax: 2023-11-17 14:24:53.737 | timeDiff: 1209584.33500004
autoQC01 module APEX long nrow: 162
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUCFWHM
Warning: Removed 28 rows containing missing values (`geom_point()`).
Warning: Removed 8 rows containing missing values (`geom_line()`).
input timeRange: 1209600 | timeMin: 2023-11-03 15:25:10.540589 | timeMax: 2023-11-17 14:24:53.737 | timeDiff: 1209583.19641113
autoQC01 module APEX long nrow: 162
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUCFWHM
Warning: Removed 28 rows containing missing values (`geom_point()`).
Warning: Removed 8 rows containing missing values (`geom_line()`).
input timeRange: 1209600 | timeMin: 2023-11-03 14:25:10.541 | timeMax: 2023-11-17 14:24:53.737 | timeDiff: 1209583.1960001
autoQC01 module APEX long nrow: 162
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUCFWHM
Warning: Removed 28 rows containing missing values (`geom_point()`).
Warning: Removed 8 rows containing missing values (`geom_line()`).
input timeRange: 1209600 | timeMin: 2023-11-03 15:25:11.657345 | timeMax: 2023-11-17 14:24:53.737 | timeDiff: 1209582.07965493
autoQC01 module APEX long nrow: 162
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUCFWHM
Warning: Removed 28 rows containing missing values (`geom_point()`).
Warning: Removed 8 rows containing missing values (`geom_line()`).
input timeRange: 1209600 | timeMin: 2023-11-03 14:25:11.657 | timeMax: 2023-11-17 14:24:53.737 | timeDiff: 1209582.07999992
autoQC01 module APEX long nrow: 162
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUCFWHM
Warning: Removed 28 rows containing missing values (`geom_point()`).
Warning: Removed 8 rows containing missing values (`geom_line()`).
input timeRange: 1209600 | timeMin: 2023-11-03 15:25:12.820013 | timeMax: 2023-11-17 14:24:53.737 | timeDiff: 1209580.9169867
autoQC01 module APEX long nrow: 162
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUCFWHM
Warning: Removed 28 rows containing missing values (`geom_point()`).
Warning: Removed 8 rows containing missing values (`geom_line()`).
input timeRange: 1209600 | timeMin: 2023-11-03 14:25:12.82 | timeMax: 2023-11-17 14:24:53.737 | timeDiff: 1209580.91700006
autoQC01 module APEX long nrow: 162
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUCFWHM
Warning: Removed 28 rows containing missing values (`geom_point()`).
Warning: Removed 8 rows containing missing values (`geom_line()`).
input timeRange: 1209600 | timeMin: 2023-11-03 15:25:13.998873 | timeMax: 2023-11-17 14:24:53.737 | timeDiff: 1209579.73812652
autoQC01 module APEX long nrow: 162
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUCFWHM
Warning: Removed 28 rows containing missing values (`geom_point()`).
Warning: Removed 8 rows containing missing values (`geom_line()`).
Warning in observe() : timeDiff is higher than timeRange
input timeRange: 1209600 | timeMin: 2023-11-03 14:25:13.999 | timeMax: 2023-11-17 14:24:53.737 | timeDiff: 1209579.73799992
autoQC01 module APEX long nrow: 162
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUCFWHM
Warning: Removed 28 rows containing missing values (`geom_point()`).
Warning: Removed 8 rows containing missing values (`geom_line()`).
input timeRange: 1209600 | timeMin: 2023-11-03 15:25:15.237084 | timeMax: 2023-11-17 14:24:53.737 | timeDiff: 1209578.49991608
autoQC01 module APEX long nrow: 162
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUCFWHM
Warning: Removed 28 rows containing missing values (`geom_point()`).
Warning: Removed 8 rows containing missing values (`geom_line()`).
input timeRange: 1209600 | timeMin: 2023-11-03 14:25:15.237 | timeMax: 2023-11-17 14:24:53.737 | timeDiff: 1209578.5
autoQC01 module APEX long nrow: 162
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUCFWHM
Warning: Removed 28 rows containing missing values (`geom_point()`).
Warning: Removed 8 rows containing missing values (`geom_line()`).
input timeRange: 1209600 | timeMin: 2023-11-03 15:25:16.462497 | timeMax: 2023-11-17 14:24:53.737 | timeDiff: 1209577.27450347
autoQC01 module APEX long nrow: 162
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUCFWHM
Warning: Removed 28 rows containing missing values (`geom_point()`).
Warning: Removed 8 rows containing missing values (`geom_line()`).
input timeRange: 1209600 | timeMin: 2023-11-03 14:25:16.463 | timeMax: 2023-11-17 14:24:53.737 | timeDiff: 1209577.27399993
autoQC01 module APEX long nrow: 162
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUCFWHM
Warning: Removed 28 rows containing missing values (`geom_point()`).
Warning: Removed 8 rows containing missing values (`geom_line()`).
input timeRange: 1209600 | timeMin: 2023-11-03 15:25:17.644521 | timeMax: 2023-11-17 14:24:53.737 | timeDiff: 1209576.09247875
autoQC01 module APEX long nrow: 162
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUCFWHM
Warning: Removed 28 rows containing missing values (`geom_point()`).
Warning: Removed 8 rows containing missing values (`geom_line()`).
input timeRange: 1209600 | timeMin: 2023-11-03 14:25:17.645 | timeMax: 2023-11-17 14:24:53.737 | timeDiff: 1209576.09200001
autoQC01 module APEX long nrow: 162
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUCFWHM
Warning: Removed 28 rows containing missing values (`geom_point()`).
Warning: Removed 8 rows containing missing values (`geom_line()`).
input timeRange: 1209600 | timeMin: 2023-11-03 15:25:18.848025 | timeMax: 2023-11-17 14:24:53.737 | timeDiff: 1209574.88897514
autoQC01 module APEX long nrow: 162
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUCFWHM
Warning: Removed 28 rows containing missing values (`geom_point()`).
Warning: Removed 8 rows containing missing values (`geom_line()`).
input timeRange: 1209600 | timeMin: 2023-11-03 14:25:18.848 | timeMax: 2023-11-17 14:24:53.737 | timeDiff: 1209574.88899994
autoQC01 module APEX long nrow: 162
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUCFWHM
Warning: Removed 28 rows containing missing values (`geom_point()`).
Warning: Removed 8 rows containing missing values (`geom_line()`).
input timeRange: 1209600 | timeMin: 2023-11-03 15:25:20.091219 | timeMax: 2023-11-17 14:24:53.737 | timeDiff: 1209573.64578056
autoQC01 module APEX long nrow: 162
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUCFWHM
Warning: Removed 28 rows containing missing values (`geom_point()`).
Warning: Removed 8 rows containing missing values (`geom_line()`).
Warning in observe() : timeDiff is higher than timeRange
input timeRange: 1209600 | timeMin: 2023-11-10 15:25:19.719548 | timeMax: 2023-11-17 15:25:19.71958 | timeDiff: 604800.000032425
autoQC01 module APEX wide nrow: 244574
autoQC01 module APEX long nrow: 72
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUC
Warning: Removed 7 rows containing missing values (`geom_point()`).
input timeRange: 1209600 | timeMin: 2023-11-10 14:25:19.72 | timeMax: 2023-11-17 14:25:19.72 | timeDiff: 604800
input timeRange: 7776000 | timeMin: 2023-10-27 16:36:42.158038 | timeMax: 2023-11-17 15:36:42.158922 | timeDiff: 1814400.00088406
autoQC01 module APEX wide nrow: 244574
autoQC01 module APEX long nrow: 333
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUC
Warning: Removed 27 rows containing missing values (`geom_point()`).
input timeRange: 7776000 | timeMin: 2023-10-27 14:36:42.158 | timeMax: 2023-11-17 14:36:42.159 | timeDiff: 1814400.00099993
input timeRange: 7776000 | timeMin: 2023-10-27 16:36:51.135327 | timeMax: 2023-11-17 15:36:51.136195 | timeDiff: 1814400.0008688
autoQC01 module APEX wide nrow: 244574
autoQC01 module APEX long nrow: 333
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUC
Warning: Removed 27 rows containing missing values (`geom_point()`).
input timeRange: 7776000 | timeMin: 2023-10-27 14:36:51.135 | timeMax: 2023-11-17 14:36:51.136 | timeDiff: 1814400.00099993
input timeRange: 7776000 | timeMin: 2023-10-27 16:37:28.03745 | timeMax: 2023-11-17 15:37:28.038337 | timeDiff: 1814400.00088668
autoQC01 module APEX wide nrow: 244574
autoQC01 module APEX long nrow: 333
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUC
Warning: Removed 27 rows containing missing values (`geom_point()`).
input timeRange: 7776000 | timeMin: 2023-10-27 14:37:28.037 | timeMax: 2023-11-17 14:37:28.038 | timeDiff: 1814400.00100017
autoQC01 module APEX long nrow: 243
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUC
Warning: Removed 23 rows containing missing values (`geom_point()`).
cometTimes:1677 | 74659
comet filter length: 0
Warning: Error in graphics::plot.new: figure margins too large
  130: graphics::plot.new
  127: startPNG
  126: drawPlot
  112: <reactive:plotObj>
   96: drawReactive
   83: renderFunc
   82: output$plotTIC
    1: runApp
Warning in observe() : timeDiff is higher than timeRange
cometTimes:0 | 0
comet filter length: 0
Warning in min.default(numeric(0), na.rm = FALSE) :
  no non-missing arguments to min; returning Inf
Warning in renderUI() : NAs introduced by coercion to integer range
Warning: Error in : In sliderInput(): `min`, `max`, and `value` cannot be NULL, NA, or empty.
  100: stop
   99: validate_slider_value
   98: sliderInput
   97: renderUI [/export/data01/scratch/DIAQC/qc/inst/shiny/fgczmsqc-dashboard/server.R#386]
   96: func
   83: renderFunc
   82: output$diannTimeSlider
    1: runApp
Warning in observe() : timeDiff is higher than timeRange
input timeRange: 1209600 | timeMin: 2023-11-10 15:38:28.761304 | timeMax: 2023-11-17 15:38:28.761354 | timeDiff: 604800.000049353
autoQC01 module APEX wide nrow: 244574
autoQC01 module APEX long nrow: 72
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUC
Warning: Removed 7 rows containing missing values (`geom_point()`).
input timeRange: 1209600 | timeMin: 2023-11-10 14:38:28.761 | timeMax: 2023-11-17 14:38:28.761 | timeDiff: 604800
autoQC01 module APEX long nrow: 45
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUC
Warning: Removed 3 rows containing missing values (`geom_point()`).
Warning in min.default(numeric(0), na.rm = FALSE) :
  no non-missing arguments to min; returning Inf
Warning in renderUI() : NAs introduced by coercion to integer range
Warning: Error in : In sliderInput(): `min`, `max`, and `value` cannot be NULL, NA, or empty.
  100: stop
   99: validate_slider_value
   98: sliderInput
   97: renderUI [/export/data01/scratch/DIAQC/qc/inst/shiny/fgczmsqc-dashboard/server.R#386]
   96: func
   83: renderFunc
   82: output$diannTimeSlider
    1: runApp
Warning in min.default(numeric(0), na.rm = FALSE) :
  no non-missing arguments to min; returning Inf
Warning in renderUI() : NAs introduced by coercion to integer range
Warning: Error in : In sliderInput(): `min`, `max`, and `value` cannot be NULL, NA, or empty.
  100: stop
   99: validate_slider_value
   98: sliderInput
   97: renderUI [/export/data01/scratch/DIAQC/qc/inst/shiny/fgczmsqc-dashboard/server.R#386]
   96: func
   83: renderFunc
   82: output$diannTimeSlider
    1: runApp
Warning in min.default(numeric(0), na.rm = FALSE) :
  no non-missing arguments to min; returning Inf
Warning in renderUI() : NAs introduced by coercion to integer range
Warning: Error in : In sliderInput(): `min`, `max`, and `value` cannot be NULL, NA, or empty.
  100: stop
   99: validate_slider_value
   98: sliderInput
   97: renderUI [/export/data01/scratch/DIAQC/qc/inst/shiny/fgczmsqc-dashboard/server.R#386]
   96: func
   83: renderFunc
   82: output$diannTimeSlider
    1: runApp
Warning in observe() : timeDiff is higher than timeRange
input timeRange: 1209600 | timeMin: 2023-11-10 15:42:33.088688 | timeMax: 2023-11-17 15:42:33.088739 | timeDiff: 604800.000050545
autoQC01 module APEX wide nrow: 244574
autoQC01 module APEX long nrow: 72
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
AUC
Warning: Removed 7 rows containing missing values (`geom_point()`).
input timeRange: 1209600 | timeMin: 2023-11-10 14:42:33.089 | timeMax: 2023-11-17 14:42:33.089 | timeDiff: 604800
autoQC01 module APEX long nrow: 96
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, YILAGVENSK
AUC
Warning: Removed 9 rows containing missing values (`geom_point()`).
Warning: Removed 1 row containing missing values (`geom_line()`).
autoQC01 module APEX long nrow: 120
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, YILAGVENSK, GTFIIDPGGVIR
AUC
Warning: Removed 10 rows containing missing values (`geom_point()`).
Warning: Removed 1 row containing missing values (`geom_line()`).
autoQC01 module APEX long nrow: 144
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, YILAGVENSK, GTFIIDPGGVIR, GTFIIDPAAVIR
AUC
Warning: Removed 12 rows containing missing values (`geom_point()`).
Warning: Removed 2 rows containing missing values (`geom_line()`).
autoQC01 module APEX long nrow: 168
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, YILAGVENSK, GTFIIDPGGVIR, GTFIIDPAAVIR, GAGSSEPVTGLDAK
AUC
Warning: Removed 14 rows containing missing values (`geom_point()`).
Warning: Removed 3 rows containing missing values (`geom_line()`).
autoQC01 module APEX long nrow: 192
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, YILAGVENSK, GTFIIDPGGVIR, GTFIIDPAAVIR, GAGSSEPVTGLDAK, VEATFGVDESNAK
AUC
Warning: Removed 17 rows containing missing values (`geom_point()`).
Warning: Removed 5 rows containing missing values (`geom_line()`).
autoQC01 module APEX long nrow: 216
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, YILAGVENSK, GTFIIDPGGVIR, GTFIIDPAAVIR, GAGSSEPVTGLDAK, VEATFGVDESNAK, TPVITGAPYEYR
AUC
Warning: Removed 22 rows containing missing values (`geom_point()`).
Warning: Removed 7 rows containing missing values (`geom_line()`).
autoQC01 module APEX long nrow: 240
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, YILAGVENSK, GTFIIDPGGVIR, GTFIIDPAAVIR, GAGSSEPVTGLDAK, VEATFGVDESNAK, TPVITGAPYEYR, DGLDAASYYAPVR
AUC
Warning: Removed 24 rows containing missing values (`geom_point()`).
Warning: Removed 8 rows containing missing values (`geom_line()`).
autoQC01 module APEX long nrow: 264
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, YILAGVENSK, GTFIIDPGGVIR, GTFIIDPAAVIR, GAGSSEPVTGLDAK, VEATFGVDESNAK, TPVITGAPYEYR, DGLDAASYYAPVR, ADVTPADFSEWSK
AUC
Warning: Removed 24 rows containing missing values (`geom_point()`).
Warning: Removed 8 rows containing missing values (`geom_line()`).
autoQC01 module APEX long nrow: 264
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, YILAGVENSK, GTFIIDPGGVIR, GTFIIDPAAVIR, GAGSSEPVTGLDAK, VEATFGVDESNAK, TPVITGAPYEYR, DGLDAASYYAPVR, ADVTPADFSEWSK
AUCFWHM
Warning: Removed 48 rows containing missing values (`geom_point()`).
Warning: Removed 8 rows containing missing values (`geom_line()`).
autoQC01 module APEX long nrow: 264
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, YILAGVENSK, GTFIIDPGGVIR, GTFIIDPAAVIR, GAGSSEPVTGLDAK, VEATFGVDESNAK, TPVITGAPYEYR, DGLDAASYYAPVR, ADVTPADFSEWSK
AUCFWHMAPEX
Warning: Removed 72 rows containing missing values (`geom_point()`).
Warning: Removed 8 rows containing missing values (`geom_line()`).
autoQC01 module APEX long nrow: 264
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, YILAGVENSK, GTFIIDPGGVIR, GTFIIDPAAVIR, GAGSSEPVTGLDAK, VEATFGVDESNAK, TPVITGAPYEYR, DGLDAASYYAPVR, ADVTPADFSEWSK
AUCAPEX
Warning: Removed 48 rows containing missing values (`geom_point()`).
Warning: Removed 8 rows containing missing values (`geom_line()`).
plot_click: p33344/Proteomics/EXPLORIS_2/analytic_20231111/20231111_C33344_001_autoQC01.raw
plot_click: p33344/Proteomics/EXPLORIS_2/analytic_20231111/20231111_C33344_001_autoQC01.raw
fn has changed to /srv/www/htdocs//p33344/Proteomics/EXPLORIS_2/analytic_20231111/20231111_C33344_001_autoQC01.raw
Reading raw file: /srv/www/htdocs//p33344/Proteomics/EXPLORIS_2/analytic_20231111/20231111_C33344_001_autoQC01.raw
length = 11
Plotting chromatograms ...
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
plot_click: p33344/Proteomics/EXPLORIS_2/analytic_20231111/20231111_C33344_001_autoQC01.raw | plot_click: p33344/Proteomics/EXPLORIS_2/analytic_20231111/20231111_C33344_001_autoQC01.raw
plot_click: p33344/Proteomics/EXPLORIS_2/analytic_20231111/20231111_C33344_001_autoQC01.raw | plot_click: p33344/Proteomics/EXPLORIS_2/analytic_20231111/20231111_C33344_001_autoQC01.raw
plot_click: p3000/Proteomics/EXPLORIS_2/analytic_20231113/20231113_004_autoQC01.raw | plot_click: p3000/Proteomics/EXPLORIS_2/analytic_20231113/20231113_004_autoQC01.raw
plot_click: p3000/Proteomics/EXPLORIS_2/analytic_20231113/20231113_004_autoQC01.raw | plot_click: p3000/Proteomics/EXPLORIS_2/analytic_20231113/20231113_004_autoQC01.raw
fn has changed to /srv/www/htdocs//p3000/Proteomics/EXPLORIS_2/analytic_20231113/20231113_004_autoQC01.raw
Reading raw file: /srv/www/htdocs//p3000/Proteomics/EXPLORIS_2/analytic_20231113/20231113_004_autoQC01.raw
length = 11
Plotting chromatograms ...
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
Warning: Removed 48 rows containing missing values (`geom_point()`).
Warning: Removed 8 rows containing missing values (`geom_line()`).
autoQC01 module APEX long nrow: 165
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, YILAGVENSK, GTFIIDPGGVIR, GTFIIDPAAVIR, GAGSSEPVTGLDAK, VEATFGVDESNAK, TPVITGAPYEYR, DGLDAASYYAPVR, ADVTPADFSEWSK
AUCAPEX
Warning: Removed 12 rows containing missing values (`geom_point()`).
Warning: Removed 3 rows containing missing values (`geom_line()`).
plot_click: p3000/Proteomics/LUMOS_2/roschi_20231113_DIA_K562/20231113_012_autoQC01.raw
plot_click: p3000/Proteomics/LUMOS_2/roschi_20231113_DIA_K562/20231113_012_autoQC01.raw
fn has changed to /srv/www/htdocs//p3000/Proteomics/LUMOS_2/roschi_20231113_DIA_K562/20231113_012_autoQC01.raw
Reading raw file: /srv/www/htdocs//p3000/Proteomics/LUMOS_2/roschi_20231113_DIA_K562/20231113_012_autoQC01.raw
length = 11
Plotting chromatograms ...
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
input timeRange: 1209600 | timeMin: 2023-11-10 14:42:33.089 | timeMax: 2023-11-17 14:42:36.56115 | timeDiff: 604803.472149849
autoQC01 module APEX long nrow: 165
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, YILAGVENSK, GTFIIDPGGVIR, GTFIIDPAAVIR, GAGSSEPVTGLDAK, VEATFGVDESNAK, TPVITGAPYEYR, DGLDAASYYAPVR, ADVTPADFSEWSK
AUCAPEX
Warning: Removed 12 rows containing missing values (`geom_point()`).
Warning: Removed 3 rows containing missing values (`geom_line()`).
plot_click: p3000/Proteomics/LUMOS_2/roschi_20231113_DIA_K562/20231113_012_autoQC01.raw
input timeRange: 1209600 | timeMin: 2023-11-10 14:42:33.089 | timeMax: 2023-11-17 14:42:36.561 | timeDiff: 604803.472000122
autoQC01 module APEX long nrow: 165
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, YILAGVENSK, GTFIIDPGGVIR, GTFIIDPAAVIR, GAGSSEPVTGLDAK, VEATFGVDESNAK, TPVITGAPYEYR, DGLDAASYYAPVR, ADVTPADFSEWSK
AUCAPEX
Warning: Removed 12 rows containing missing values (`geom_point()`).
Warning: Removed 3 rows containing missing values (`geom_line()`).
plot_click: p3000/Proteomics/LUMOS_2/roschi_20231113_DIA_K562/20231113_012_autoQC01.raw
plot_click: p3000/Proteomics/LUMOS_2/roschi_20231113_DIA_K562/20231113_012_autoQC01.raw
input timeRange: 1209600 | timeMin: 2023-11-12 14:46:20.74 | timeMax: 2023-11-17 14:42:36.561 | timeDiff: 431775.821000099
autoQC01 module APEX long nrow: 66
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, YILAGVENSK, GTFIIDPGGVIR, GTFIIDPAAVIR, GAGSSEPVTGLDAK, VEATFGVDESNAK, TPVITGAPYEYR, DGLDAASYYAPVR, ADVTPADFSEWSK
AUCAPEX
Warning: Removed 2 rows containing missing values (`geom_point()`).
Warning: Removed 1 row containing missing values (`geom_line()`).
plot_click: p3000/Proteomics/LUMOS_2/roschi_20231113_DIA_K562/20231113_012_autoQC01.raw
input timeRange: 1209600 | timeMin: 2023-11-11 14:46:38.988 | timeMax: 2023-11-16 14:46:38.988 | timeDiff: 432000
autoQC01 module APEX long nrow: 99
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, YILAGVENSK, GTFIIDPGGVIR, GTFIIDPAAVIR, GAGSSEPVTGLDAK, VEATFGVDESNAK, TPVITGAPYEYR, DGLDAASYYAPVR, ADVTPADFSEWSK
AUCAPEX
Warning: Removed 4 rows containing missing values (`geom_point()`).
Warning: Removed 2 rows containing missing values (`geom_line()`).
input timeRange: 1209600 | timeMin: 2023-11-12 14:46:43.202 | timeMax: 2023-11-17 14:46:43.20199 | timeDiff: 431999.999989986
autoQC01 module APEX long nrow: 66
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, YILAGVENSK, GTFIIDPGGVIR, GTFIIDPAAVIR, GAGSSEPVTGLDAK, VEATFGVDESNAK, TPVITGAPYEYR, DGLDAASYYAPVR, ADVTPADFSEWSK
AUCAPEX
Warning: Removed 2 rows containing missing values (`geom_point()`).
Warning: Removed 1 row containing missing values (`geom_line()`).
input timeRange: 1209600 | timeMin: 2023-11-12 14:46:43.202 | timeMax: 2023-11-17 14:46:43.202 | timeDiff: 432000
autoQC01 module APEX long nrow: 66
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, YILAGVENSK, GTFIIDPGGVIR, GTFIIDPAAVIR, GAGSSEPVTGLDAK, VEATFGVDESNAK, TPVITGAPYEYR, DGLDAASYYAPVR, ADVTPADFSEWSK
AUCAPEX
Warning: Removed 2 rows containing missing values (`geom_point()`).
Warning: Removed 1 row containing missing values (`geom_line()`).