Listening on http://127.0.0.1:43625

Attaching package: 'shinydashboard'

The following object is masked from 'package:graphics':

    box

Loading required package: readr
Loading required package: reshape2
Loading required package: lattice
Loading required package: rawrr
input timeRange: 7776000 | timeMin: 2023-10-30 08:01:05.221518 | timeMax: 2023-11-20 08:01:05.222189 | timeDiff: 1814400.00067186
Loading required package: bfabricShiny

Attaching package: 'bfabricShiny'

The following object is masked from 'package:base':

    save

autoQC01 module APEX wide nrow: 244585
autoQC01 module APEX long nrow: 333
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
APEXAUC
Warning: Removed 8 rows containing missing values (`geom_point()`).
input timeRange: 7776000 | timeMin: 2023-10-30 07:01:05.222 | timeMax: 2023-11-20 07:01:05.222 | timeDiff: 1814400
Warning: Error in if: missing value where TRUE/FALSE needed
  1: runApp
input timeRange: 1209600 | timeMin: 2023-11-13 08:40:50.834563 | timeMax: 2023-11-20 08:40:50.834591 | timeDiff: 604800.000028849
input timeRange: 7776000 | timeMin: 2023-10-30 08:41:00.071726 | timeMax: 2023-11-20 08:41:00.072325 | timeDiff: 1814400.00059962
autoQC01 module APEX wide nrow: 244585
autoQC01 module APEX long nrow: 324
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
APEXAUC
Warning: Removed 8 rows containing missing values (`geom_point()`).
input timeRange: 7776000 | timeMin: 2023-10-30 07:41:00.072 | timeMax: 2023-11-20 07:41:00.072 | timeDiff: 1814400
cometTimes:1794 | 74893
comet filter length: 0
cometTimes:1794 | 74893
comet filter length: 21
autoQC01 module APEX long nrow: 252
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
APEXAUC
Warning: Removed 24 rows containing missing values (`geom_point()`).
plot_click: p33212/Proteomics/LUMOS_2/leonardoschwarz_20231116/20231116_007_autoQC01.raw
plot_click: p33212/Proteomics/LUMOS_2/leonardoschwarz_20231116/20231116_007_autoQC01.raw
fn has changed to /srv/www/htdocs//p33212/Proteomics/LUMOS_2/leonardoschwarz_20231116/20231116_007_autoQC01.raw
Reading raw file: /srv/www/htdocs//p33212/Proteomics/LUMOS_2/leonardoschwarz_20231116/20231116_007_autoQC01.raw
length = 3
Plotting chromatograms ...
Plotting chromatograms ...
Plotting chromatograms ...
input timeRange: 7776000 | timeMin: 2023-09-04 07:41:03.518 | timeMax: 2023-11-20 07:41:00.072 | timeDiff: 6652796.55400014
autoQC01 module APEX long nrow: 1098
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
APEXAUC
Warning: Removed 40 rows containing missing values (`geom_point()`).
plot_click: p33212/Proteomics/LUMOS_2/leonardoschwarz_20231116/20231116_007_autoQC01.raw
input timeRange: 7776000 | timeMin: 2023-10-28 07:41:58.361 | timeMax: 2023-11-20 07:41:00.072 | timeDiff: 1987141.71099997
autoQC01 module APEX long nrow: 252
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
APEXAUC
Warning: Removed 24 rows containing missing values (`geom_point()`).
cometTimes:1807 | 74893
comet filter length: 48
input timeRange: 7776000 | timeMin: 2023-09-08 07:42:05.752 | timeMax: 2023-11-20 07:41:00.072 | timeDiff: 6307134.31999993
cometTimes:5317 | 74893
comet filter length: 156
input timeRange: 7776000 | timeMin: 2023-10-30 10:16:14.031494 | timeMax: 2023-11-20 10:16:14.032092 | timeDiff: 1814400.00059724
autoQC01 module APEX wide nrow: 244585
autoQC01 module APEX long nrow: 324
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
APEXAUC
Warning: Removed 8 rows containing missing values (`geom_point()`).
input timeRange: 7776000 | timeMin: 2023-10-30 09:16:14.031 | timeMax: 2023-11-20 09:16:14.032 | timeDiff: 1814400.00100017
autoQC01 module APEX long nrow: 252
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
APEXAUC
Warning: Removed 24 rows containing missing values (`geom_point()`).
plot_click: p33212/Proteomics/LUMOS_2/leonardoschwarz_20231116/20231116_007_autoQC01.raw
plot_click: p33212/Proteomics/LUMOS_2/leonardoschwarz_20231116/20231116_007_autoQC01.raw
fn has changed to /srv/www/htdocs//p33212/Proteomics/LUMOS_2/leonardoschwarz_20231116/20231116_007_autoQC01.raw
Reading raw file: /srv/www/htdocs//p33212/Proteomics/LUMOS_2/leonardoschwarz_20231116/20231116_007_autoQC01.raw
length = 3
Plotting chromatograms ...
input timeRange: 7776000 | timeMin: 2023-10-30 09:16:14.031 | timeMax: 2023-11-20 09:16:17.32287 | timeDiff: 1814403.29187012
autoQC01 module APEX long nrow: 252
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
APEXAUC
Warning: Removed 24 rows containing missing values (`geom_point()`).
plot_click: p33212/Proteomics/LUMOS_2/leonardoschwarz_20231116/20231116_007_autoQC01.raw
input timeRange: 7776000 | timeMin: 2023-10-30 09:16:14.031 | timeMax: 2023-11-20 09:16:17.323 | timeDiff: 1814403.29200006
autoQC01 module APEX long nrow: 252
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
APEXAUC
Warning: Removed 24 rows containing missing values (`geom_point()`).
plot_click: p33212/Proteomics/LUMOS_2/leonardoschwarz_20231116/20231116_007_autoQC01.raw
plot_click: p33212/Proteomics/LUMOS_2/leonardoschwarz_20231116/20231116_007_autoQC01.raw
Warning in observe() : timeDiff is higher than timeRange
input timeRange: 7776000 | timeMin: 2023-10-24 09:16:53.347 | timeMax: 2023-11-14 09:16:56.639 | timeDiff: 1814403.29200006
autoQC01 module APEX long nrow: 297
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
APEXAUC
Warning: Removed 24 rows containing missing values (`geom_point()`).
plot_click: 
input timeRange: 7776000 | timeMin: 2023-10-30 09:17:29.019 | timeMax: 2023-11-20 09:17:32.31092 | timeDiff: 1814403.29191995
autoQC01 module APEX long nrow: 252
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
APEXAUC
Warning: Removed 24 rows containing missing values (`geom_point()`).
input timeRange: 7776000 | timeMin: 2023-10-30 09:17:29.019 | timeMax: 2023-11-20 09:17:32.311 | timeDiff: 1814403.29200006
autoQC01 module APEX long nrow: 252
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
APEXAUC
Warning: Removed 24 rows containing missing values (`geom_point()`).
input timeRange: 7776000 | timeMin: 2023-11-08 09:17:34.423 | timeMax: 2023-11-20 09:17:32.311 | timeDiff: 1036797.88800001
autoQC01 module APEX long nrow: 81
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
APEXAUC
Warning: Removed 2 rows containing missing values (`geom_point()`).
plot_click: p33212/Proteomics/LUMOS_2/leonardoschwarz_20231116/20231116_007_autoQC01.raw
plot_click: p33212/Proteomics/LUMOS_2/leonardoschwarz_20231116/20231116_007_autoQC01.raw
cometTimes:871 | 74893
comet filter length: 0
cometTimes:871 | 74893
comet filter length: 30
input timeRange: 7776000 | timeMin: 2023-11-08 09:17:34.423 | timeMax: 2023-11-20 09:18:54.95262 | timeDiff: 1036880.52961993
cometTimes:871 | 74893
comet filter length: 30
input timeRange: 7776000 | timeMin: 2023-11-08 09:17:34.423 | timeMax: 2023-11-20 09:18:54.953 | timeDiff: 1036880.52999997
cometTimes:871 | 74893
comet filter length: 30
Warning: Error in if: argument is of length zero
  97: renderUI [/export/data01/scratch/DIAQC/qc/inst/shiny/fgczmsqc-dashboard/server.R#472]
  96: func
  83: renderFunc
  82: output$fileOutput
   1: runApp
autoQC01 module APEX long nrow: 81
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
APEXAUC
plot_click: p33212/Proteomics/LUMOS_2/leonardoschwarz_20231116/20231116_007_autoQC01.raw
Warning: Removed 2 rows containing missing values (`geom_point()`).
plot_click: p33212/Proteomics/LUMOS_2/leonardoschwarz_20231116/20231116_007_autoQC01.raw
plot_click: p33212/Proteomics/LUMOS_2/leonardoschwarz_20231116/20231116_007_autoQC01.raw
plot_click: p33212/Proteomics/LUMOS_2/leonardoschwarz_20231116/20231116_007_autoQC01.raw
plot_click: p33212/Proteomics/LUMOS_2/leonardoschwarz_20231116/20231116_007_autoQC01.raw
plot_click: 
plot_click: 
fn has changed to /srv/www/htdocs//NA
input timeRange: 7776000 | timeMin: 2023-10-30 10:36:39.952813 | timeMax: 2023-11-20 10:36:39.953909 | timeDiff: 1814400.00109601
autoQC01 module APEX wide nrow: 244585
autoQC01 module APEX long nrow: 324
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
APEXAUC
Warning: Removed 8 rows containing missing values (`geom_point()`).
input timeRange: 7776000 | timeMin: 2023-10-30 09:36:39.953 | timeMax: 2023-11-20 09:36:39.954 | timeDiff: 1814400.00099993
autoQC01 module APEX long nrow: 234
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
APEXAUC
Warning: Removed 2 rows containing missing values (`geom_point()`).
input timeRange: 7776000 | timeMin: 2023-10-30 11:56:59.01188 | timeMax: 2023-11-20 11:56:59.0126 | timeDiff: 1814400.00072026
autoQC01 module APEX wide nrow: 244585
autoQC01 module APEX long nrow: 324
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
APEXAUC
Warning: Removed 8 rows containing missing values (`geom_point()`).
input timeRange: 7776000 | timeMin: 2023-10-30 10:56:59.012 | timeMax: 2023-11-20 10:56:59.013 | timeDiff: 1814400.00099993
cometTimes:1794 | 74893
comet filter length: 0
cometTimes:1794 | 74893
comet filter length: 48
autoQC01 module APEX long nrow: 252
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
APEXAUC
Warning: Removed 24 rows containing missing values (`geom_point()`).
plot_click: p33212/Proteomics/LUMOS_2/leonardoschwarz_20231116/20231116_007_autoQC01.raw
plot_click: p33212/Proteomics/LUMOS_2/leonardoschwarz_20231116/20231116_007_autoQC01.raw
fn has changed to /srv/www/htdocs//p33212/Proteomics/LUMOS_2/leonardoschwarz_20231116/20231116_007_autoQC01.raw
Reading raw file: /srv/www/htdocs//p33212/Proteomics/LUMOS_2/leonardoschwarz_20231116/20231116_007_autoQC01.raw
length = 3
Plotting chromatograms ...
input timeRange: 7776000 | timeMin: 2023-10-30 12:04:22.357145 | timeMax: 2023-11-20 12:04:22.358189 | timeDiff: 1814400.00104427
autoQC01 module APEX wide nrow: 244585
autoQC01 module APEX long nrow: 324
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
APEXAUC
Warning: Removed 8 rows containing missing values (`geom_point()`).
input timeRange: 7776000 | timeMin: 2023-10-30 11:04:22.357 | timeMax: 2023-11-20 11:04:22.358 | timeDiff: 1814400.00099993
plot_click: p33344/Proteomics/EXPLORIS_2/analytic_20231111/20231111_C33344_006_autoQC01.raw
plot_click: p33344/Proteomics/EXPLORIS_2/analytic_20231111/20231111_C33344_006_autoQC01.raw
fn has changed to /srv/www/htdocs//p33344/Proteomics/EXPLORIS_2/analytic_20231111/20231111_C33344_006_autoQC01.raw
Reading raw file: /srv/www/htdocs//p33344/Proteomics/EXPLORIS_2/analytic_20231111/20231111_C33344_006_autoQC01.raw
length = 3
Plotting chromatograms ...
autoQC01 module APEX long nrow: 324
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
APEXAUC
Warning: Removed 14 rows containing missing values (`geom_point()`).
plot_click: 
plot_click: p33078/Proteomics/EXPLORIS_1/analytic_20231115/20231115_C33078_001_autoQC01.raw
plot_click: p33078/Proteomics/EXPLORIS_1/analytic_20231115/20231115_C33078_001_autoQC01.raw
fn has changed to /srv/www/htdocs//p33078/Proteomics/EXPLORIS_1/analytic_20231115/20231115_C33078_001_autoQC01.raw
Reading raw file: /srv/www/htdocs//p33078/Proteomics/EXPLORIS_1/analytic_20231115/20231115_C33078_001_autoQC01.raw
length = 3
Plotting chromatograms ...
autoQC01 module APEX long nrow: 432
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR
APEXAUC
Warning: Removed 14 rows containing missing values (`geom_point()`).
plot_click: p33078/Proteomics/EXPLORIS_1/analytic_20231115/20231115_C33078_001_autoQC01.raw
Reading raw file: /srv/www/htdocs//p33078/Proteomics/EXPLORIS_1/analytic_20231115/20231115_C33078_001_autoQC01.raw
length = 4
Plotting chromatograms ...
autoQC01 module APEX long nrow: 540
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, GTFIIDPAAVIR
APEXAUC
Warning: Removed 14 rows containing missing values (`geom_point()`).
plot_click: p33078/Proteomics/EXPLORIS_1/analytic_20231115/20231115_C33078_001_autoQC01.raw
Reading raw file: /srv/www/htdocs//p33078/Proteomics/EXPLORIS_1/analytic_20231115/20231115_C33078_001_autoQC01.raw
length = 5
Plotting chromatograms ...
autoQC01 module APEX long nrow: 648
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, GTFIIDPAAVIR, GAGSSEPVTGLDAK
APEXAUC
Warning: Removed 14 rows containing missing values (`geom_point()`).
plot_click: p33078/Proteomics/EXPLORIS_1/analytic_20231115/20231115_C33078_001_autoQC01.raw | plot_click: p33078/Proteomics/EXPLORIS_1/analytic_20231115/20231115_C33078_001_autoQC01.raw
Reading raw file: /srv/www/htdocs//p33078/Proteomics/EXPLORIS_1/analytic_20231115/20231115_C33078_001_autoQC01.raw
length = 6
Plotting chromatograms ...
autoQC01 module APEX long nrow: 756
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, GTFIIDPAAVIR, GAGSSEPVTGLDAK, VEATFGVDESNAK
APEXAUC
Warning: Removed 14 rows containing missing values (`geom_point()`).
plot_click: p33078/Proteomics/EXPLORIS_1/analytic_20231115/20231115_C33078_001_autoQC01.raw | plot_click: p33078/Proteomics/EXPLORIS_1/analytic_20231115/20231115_C33078_001_autoQC01.raw
Reading raw file: /srv/www/htdocs//p33078/Proteomics/EXPLORIS_1/analytic_20231115/20231115_C33078_001_autoQC01.raw
length = 7
Plotting chromatograms ...
autoQC01 module APEX long nrow: 864
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, GTFIIDPAAVIR, GAGSSEPVTGLDAK, VEATFGVDESNAK, YILAGVENSK
APEXAUC
Warning: Removed 14 rows containing missing values (`geom_point()`).
plot_click: p33078/Proteomics/EXPLORIS_1/analytic_20231115/20231115_C33078_001_autoQC01.raw | plot_click: p33078/Proteomics/EXPLORIS_1/analytic_20231115/20231115_C33078_001_autoQC01.raw
Reading raw file: /srv/www/htdocs//p33078/Proteomics/EXPLORIS_1/analytic_20231115/20231115_C33078_001_autoQC01.raw
length = 8
Plotting chromatograms ...
autoQC01 module APEX long nrow: 972
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, GTFIIDPAAVIR, GAGSSEPVTGLDAK, VEATFGVDESNAK, YILAGVENSK, TPVITGAPYEYR
APEXAUC
Warning: Removed 16 rows containing missing values (`geom_point()`).
plot_click: p33078/Proteomics/EXPLORIS_1/analytic_20231115/20231115_C33078_001_autoQC01.raw | plot_click: p33078/Proteomics/EXPLORIS_1/analytic_20231115/20231115_C33078_001_autoQC01.raw | plot_click: p33078/Proteomics/EXPLORIS_1/analytic_20231115/20231115_C33078_001_autoQC01.raw
Reading raw file: /srv/www/htdocs//p33078/Proteomics/EXPLORIS_1/analytic_20231115/20231115_C33078_001_autoQC01.raw
length = 9
Plotting chromatograms ...
autoQC01 module APEX long nrow: 1080
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, GTFIIDPAAVIR, GAGSSEPVTGLDAK, VEATFGVDESNAK, YILAGVENSK, TPVITGAPYEYR, DGLDAASYYAPVR
APEXAUC
Warning: Removed 16 rows containing missing values (`geom_point()`).
plot_click: p33078/Proteomics/EXPLORIS_1/analytic_20231115/20231115_C33078_001_autoQC01.raw | plot_click: p33078/Proteomics/EXPLORIS_1/analytic_20231115/20231115_C33078_001_autoQC01.raw | plot_click: p33078/Proteomics/EXPLORIS_1/analytic_20231115/20231115_C33078_001_autoQC01.raw | plot_click: p33078/Proteomics/EXPLORIS_1/analytic_20231115/20231115_C33078_001_autoQC01.raw
Reading raw file: /srv/www/htdocs//p33078/Proteomics/EXPLORIS_1/analytic_20231115/20231115_C33078_001_autoQC01.raw
length = 10
Plotting chromatograms ...
autoQC01 module APEX long nrow: 1188
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, GTFIIDPAAVIR, GAGSSEPVTGLDAK, VEATFGVDESNAK, YILAGVENSK, TPVITGAPYEYR, DGLDAASYYAPVR, ADVTPADFSEWSK
APEXAUC
Warning: Removed 16 rows containing missing values (`geom_point()`).
plot_click: p33078/Proteomics/EXPLORIS_1/analytic_20231115/20231115_C33078_001_autoQC01.raw | plot_click: p33078/Proteomics/EXPLORIS_1/analytic_20231115/20231115_C33078_001_autoQC01.raw | plot_click: p33078/Proteomics/EXPLORIS_1/analytic_20231115/20231115_C33078_001_autoQC01.raw | plot_click: p33078/Proteomics/EXPLORIS_1/analytic_20231115/20231115_C33078_001_autoQC01.raw
Reading raw file: /srv/www/htdocs//p33078/Proteomics/EXPLORIS_1/analytic_20231115/20231115_C33078_001_autoQC01.raw
length = 11
Plotting chromatograms ...
plot_click: p33078/Proteomics/EXPLORIS_1/analytic_20231115/20231115_C33078_031_autoQC01.raw
plot_click: p33078/Proteomics/EXPLORIS_1/analytic_20231115/20231115_C33078_031_autoQC01.raw
fn has changed to /srv/www/htdocs//p33078/Proteomics/EXPLORIS_1/analytic_20231115/20231115_C33078_031_autoQC01.raw
Reading raw file: /srv/www/htdocs//p33078/Proteomics/EXPLORIS_1/analytic_20231115/20231115_C33078_031_autoQC01.raw
length = 11
Plotting chromatograms ...
input timeRange: 7776000 | timeMin: 2023-10-30 13:58:33.598639 | timeMax: 2023-11-20 13:58:33.599226 | timeDiff: 1814400.00058722
autoQC01 module APEX wide nrow: 244585
autoQC01 module APEX long nrow: 324
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
APEXAUC
Warning: Removed 8 rows containing missing values (`geom_point()`).
input timeRange: 7776000 | timeMin: 2023-10-30 12:58:33.599 | timeMax: 2023-11-20 12:58:33.599 | timeDiff: 1814400
Warning: Error in if: missing value where TRUE/FALSE needed
  1: runApp
input timeRange: 1209600 | timeMin: 2023-11-13 14:13:51.078559 | timeMax: 2023-11-20 14:13:51.078609 | timeDiff: 604800.000050068
input timeRange: 7776000 | timeMin: 2023-10-30 14:14:06.576624 | timeMax: 2023-11-20 14:14:06.577212 | timeDiff: 1814400.00058842
autoQC01 module APEX wide nrow: 244585
autoQC01 module APEX long nrow: 324
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
APEXAUC
Warning: Removed 8 rows containing missing values (`geom_point()`).
input timeRange: 7776000 | timeMin: 2023-10-30 13:14:06.577 | timeMax: 2023-11-20 13:14:06.577 | timeDiff: 1814400
autoQC01 module APEX long nrow: 432
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, YILAGVENSK
APEXAUC
Warning: Removed 8 rows containing missing values (`geom_point()`).
autoQC01 module APEX long nrow: 540
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, YILAGVENSK, GTFIIDPGGVIR
APEXAUC
Warning: Removed 8 rows containing missing values (`geom_point()`).
autoQC01 module APEX long nrow: 648
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, YILAGVENSK, GTFIIDPGGVIR, GTFIIDPAAVIR
APEXAUC
Warning: Removed 8 rows containing missing values (`geom_point()`).
autoQC01 module APEX long nrow: 756
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, YILAGVENSK, GTFIIDPGGVIR, GTFIIDPAAVIR, TPVITGAPYEYR
APEXAUC
Warning: Removed 8 rows containing missing values (`geom_point()`).
autoQC01 module APEX long nrow: 864
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, YILAGVENSK, GTFIIDPGGVIR, GTFIIDPAAVIR, TPVITGAPYEYR, DGLDAASYYAPVR
APEXAUC
Warning: Removed 8 rows containing missing values (`geom_point()`).
autoQC01 module APEX long nrow: 972
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, YILAGVENSK, GTFIIDPGGVIR, GTFIIDPAAVIR, TPVITGAPYEYR, DGLDAASYYAPVR, ADVTPADFSEWSK
APEXAUC
Warning: Removed 8 rows containing missing values (`geom_point()`).
autoQC01 module APEX long nrow: 1080
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, YILAGVENSK, GTFIIDPGGVIR, GTFIIDPAAVIR, TPVITGAPYEYR, DGLDAASYYAPVR, ADVTPADFSEWSK, VEATFGVDESNAK
APEXAUC
Warning: Removed 8 rows containing missing values (`geom_point()`).
autoQC01 module APEX long nrow: 1188
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, YILAGVENSK, GTFIIDPGGVIR, GTFIIDPAAVIR, TPVITGAPYEYR, DGLDAASYYAPVR, ADVTPADFSEWSK, VEATFGVDESNAK, GAGSSEPVTGLDAK
APEXAUC
Warning: Removed 8 rows containing missing values (`geom_point()`).
plot_click: p33281/Proteomics/EXPLORIS_2/analytic_20231114_m1_m2/20231114_C33281_040_autoQC01.raw
plot_click: p33281/Proteomics/EXPLORIS_2/analytic_20231114_m1_m2/20231114_C33281_040_autoQC01.raw
fn has changed to /srv/www/htdocs//p33281/Proteomics/EXPLORIS_2/analytic_20231114_m1_m2/20231114_C33281_040_autoQC01.raw
Reading raw file: /srv/www/htdocs//p33281/Proteomics/EXPLORIS_2/analytic_20231114_m1_m2/20231114_C33281_040_autoQC01.raw
length = 11
Plotting chromatograms ...
cometTimes:1794 | 74893
comet filter length: 0
cometTimes:1794 | 74893
comet filter length: 21
autoQC01 module APEX long nrow: 1122
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, YILAGVENSK, GTFIIDPGGVIR, GTFIIDPAAVIR, TPVITGAPYEYR, DGLDAASYYAPVR, ADVTPADFSEWSK, VEATFGVDESNAK, GAGSSEPVTGLDAK
APEXAUC
Warning: Removed 16 rows containing missing values (`geom_point()`).
plot_click: 
plot_click: p30646/Proteomics/EXPLORIS_1/gnarduzzi_20231116/20231116_001_autoQC01.raw | plot_click: p33437/Proteomics/EXPLORIS_1/analytic_20231116/20231116_C33437_004_autoQC01.raw
plot_click: p30646/Proteomics/EXPLORIS_1/gnarduzzi_20231116/20231116_001_autoQC01.raw | plot_click: p33437/Proteomics/EXPLORIS_1/analytic_20231116/20231116_C33437_004_autoQC01.raw
fn has changed to /srv/www/htdocs//p30646/Proteomics/EXPLORIS_1/gnarduzzi_20231116/20231116_001_autoQC01.raw
Reading raw file: /srv/www/htdocs//p30646/Proteomics/EXPLORIS_1/gnarduzzi_20231116/20231116_001_autoQC01.raw
length = 11
Plotting chromatograms ...
input timeRange: 7776000 | timeMin: 2023-10-30 14:37:49.041612 | timeMax: 2023-11-20 14:37:49.042242 | timeDiff: 1814400.00063014
autoQC01 module APEX wide nrow: 244585
autoQC01 module APEX long nrow: 324
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
APEXAUC
Warning: Removed 8 rows containing missing values (`geom_point()`).
input timeRange: 7776000 | timeMin: 2023-10-30 13:37:49.042 | timeMax: 2023-11-20 13:37:49.042 | timeDiff: 1814400
input timeRange: 7776000 | timeMin: 2023-10-30 14:44:13.113382 | timeMax: 2023-11-20 14:44:13.113997 | timeDiff: 1814400.0006156
autoQC01 module APEX wide nrow: 244585
autoQC01 module APEX long nrow: 324
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
APEXAUC
Warning: Removed 8 rows containing missing values (`geom_point()`).
input timeRange: 7776000 | timeMin: 2023-10-30 13:44:13.113 | timeMax: 2023-11-20 13:44:13.114 | timeDiff: 1814400.00100017
autoQC01 module APEX long nrow: 234
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
APEXAUC
Warning: Removed 2 rows containing missing values (`geom_point()`).
plot_click: p27367/Proteomics/LUMOS_1/zhouj_20231114/20231114_028_autoQC01.raw
plot_click: p27367/Proteomics/LUMOS_1/zhouj_20231114/20231114_028_autoQC01.raw
fn has changed to /srv/www/htdocs//p27367/Proteomics/LUMOS_1/zhouj_20231114/20231114_028_autoQC01.raw
Reading raw file: /srv/www/htdocs//p27367/Proteomics/LUMOS_1/zhouj_20231114/20231114_028_autoQC01.raw
length = 3
Plotting chromatograms ...
Plotting chromatograms ...
input timeRange: 7776000 | timeMin: 2023-10-01 13:44:16.425 | timeMax: 2023-11-20 13:44:13.114 | timeDiff: 4319996.68900013
autoQC01 module APEX long nrow: 738
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
APEXAUC
Warning: Removed 34 rows containing missing values (`geom_point()`).
plot_click: p27367/Proteomics/LUMOS_1/zhouj_20231114/20231114_028_autoQC01.raw
autoQC01 module APEX long nrow: 984
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR
APEXAUC
Warning: Removed 38 rows containing missing values (`geom_point()`).
Reading raw file: /srv/www/htdocs//p27367/Proteomics/LUMOS_1/zhouj_20231114/20231114_028_autoQC01.raw
length = 4
Plotting chromatograms ...
autoQC01 module APEX long nrow: 1230
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, GAGSSEPVTGLDAK
APEXAUC
Warning: Removed 40 rows containing missing values (`geom_point()`).
Reading raw file: /srv/www/htdocs//p27367/Proteomics/LUMOS_1/zhouj_20231114/20231114_028_autoQC01.raw
length = 5
Plotting chromatograms ...
plot_click: p27367/Proteomics/LUMOS_1/zhouj_20231114/20231114_028_autoQC01.raw
plot_click: p27367/Proteomics/LUMOS_1/zhouj_20231114/20231114_028_autoQC01.raw
autoQC01 module APEX long nrow: 1476
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, GAGSSEPVTGLDAK, GTFIIDPAAVIR
APEXAUC
Warning: Removed 44 rows containing missing values (`geom_point()`).
plot_click: p27367/Proteomics/LUMOS_1/zhouj_20231114/20231114_028_autoQC01.raw
Reading raw file: /srv/www/htdocs//p27367/Proteomics/LUMOS_1/zhouj_20231114/20231114_028_autoQC01.raw
length = 6
Plotting chromatograms ...
autoQC01 module APEX long nrow: 1722
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, GAGSSEPVTGLDAK, GTFIIDPAAVIR, VEATFGVDESNAK
APEXAUC
Warning: Removed 44 rows containing missing values (`geom_point()`).
plot_click: p27367/Proteomics/LUMOS_1/zhouj_20231114/20231114_028_autoQC01.raw
Reading raw file: /srv/www/htdocs//p27367/Proteomics/LUMOS_1/zhouj_20231114/20231114_028_autoQC01.raw
length = 7
Plotting chromatograms ...
autoQC01 module APEX long nrow: 1968
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, GAGSSEPVTGLDAK, GTFIIDPAAVIR, VEATFGVDESNAK, YILAGVENSK
APEXAUC
Warning: Removed 44 rows containing missing values (`geom_point()`).
plot_click: p27367/Proteomics/LUMOS_1/zhouj_20231114/20231114_028_autoQC01.raw
Reading raw file: /srv/www/htdocs//p27367/Proteomics/LUMOS_1/zhouj_20231114/20231114_028_autoQC01.raw
length = 8
Plotting chromatograms ...
autoQC01 module APEX long nrow: 2214
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, GAGSSEPVTGLDAK, GTFIIDPAAVIR, VEATFGVDESNAK, YILAGVENSK, TPVITGAPYEYR
APEXAUC
Warning: Removed 44 rows containing missing values (`geom_point()`).
plot_click: p27367/Proteomics/LUMOS_1/zhouj_20231114/20231114_028_autoQC01.raw
Reading raw file: /srv/www/htdocs//p27367/Proteomics/LUMOS_1/zhouj_20231114/20231114_028_autoQC01.raw
length = 9
Plotting chromatograms ...
autoQC01 module APEX long nrow: 2460
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, GAGSSEPVTGLDAK, GTFIIDPAAVIR, VEATFGVDESNAK, YILAGVENSK, TPVITGAPYEYR, DGLDAASYYAPVR
APEXAUC
Warning: Removed 44 rows containing missing values (`geom_point()`).
plot_click: p27367/Proteomics/LUMOS_1/zhouj_20231114/20231114_028_autoQC01.raw
Reading raw file: /srv/www/htdocs//p27367/Proteomics/LUMOS_1/zhouj_20231114/20231114_028_autoQC01.raw
length = 10
Plotting chromatograms ...
autoQC01 module APEX long nrow: 2706
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, GAGSSEPVTGLDAK, GTFIIDPAAVIR, VEATFGVDESNAK, YILAGVENSK, TPVITGAPYEYR, DGLDAASYYAPVR, ADVTPADFSEWSK
APEXAUC
Warning: Removed 46 rows containing missing values (`geom_point()`).
Reading raw file: /srv/www/htdocs//p27367/Proteomics/LUMOS_1/zhouj_20231114/20231114_028_autoQC01.raw
length = 11
Plotting chromatograms ...
autoQC01 module APEX long nrow: 2460
TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, GAGSSEPVTGLDAK, GTFIIDPAAVIR, VEATFGVDESNAK, YILAGVENSK, TPVITGAPYEYR, DGLDAASYYAPVR, ADVTPADFSEWSK
APEXAUC
Warning: Removed 42 rows containing missing values (`geom_point()`).
Reading raw file: /srv/www/htdocs//p27367/Proteomics/LUMOS_1/zhouj_20231114/20231114_028_autoQC01.raw
length = 10
Plotting chromatograms ...
autoQC01 module APEX long nrow: 2706
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GTFIIDPGGVIR, GAGSSEPVTGLDAK, GTFIIDPAAVIR, VEATFGVDESNAK, YILAGVENSK, TPVITGAPYEYR, DGLDAASYYAPVR, ADVTPADFSEWSK
APEXAUC
Warning: Removed 46 rows containing missing values (`geom_point()`).
Reading raw file: /srv/www/htdocs//p27367/Proteomics/LUMOS_1/zhouj_20231114/20231114_028_autoQC01.raw
length = 11
Plotting chromatograms ...
autoQC01 module APEX long nrow: 2460
LGGNEQVTR, TPVISGGPYEYR, GTFIIDPGGVIR, GAGSSEPVTGLDAK, GTFIIDPAAVIR, VEATFGVDESNAK, YILAGVENSK, TPVITGAPYEYR, DGLDAASYYAPVR, ADVTPADFSEWSK
APEXAUC
Warning: Removed 16 rows containing missing values (`geom_point()`).
Reading raw file: /srv/www/htdocs//p27367/Proteomics/LUMOS_1/zhouj_20231114/20231114_028_autoQC01.raw
length = 10
Plotting chromatograms ...
autoQC01 module APEX long nrow: 2214
TPVISGGPYEYR, GTFIIDPGGVIR, GAGSSEPVTGLDAK, GTFIIDPAAVIR, VEATFGVDESNAK, YILAGVENSK, TPVITGAPYEYR, DGLDAASYYAPVR, ADVTPADFSEWSK
APEXAUC
Warning: Removed 12 rows containing missing values (`geom_point()`).
Reading raw file: /srv/www/htdocs//p27367/Proteomics/LUMOS_1/zhouj_20231114/20231114_028_autoQC01.raw
length = 9
Plotting chromatograms ...
autoQC01 module APEX long nrow: 2646
TPVISGGPYEYR, GTFIIDPGGVIR, GAGSSEPVTGLDAK, GTFIIDPAAVIR, VEATFGVDESNAK, YILAGVENSK, TPVITGAPYEYR, DGLDAASYYAPVR, ADVTPADFSEWSK
APEXAUC
Warning: Removed 38 rows containing missing values (`geom_point()`).
autoQC01 module APEX long nrow: 2781
TPVISGGPYEYR, GTFIIDPGGVIR, GAGSSEPVTGLDAK, GTFIIDPAAVIR, VEATFGVDESNAK, YILAGVENSK, TPVITGAPYEYR, DGLDAASYYAPVR, ADVTPADFSEWSK
APEXAUC
Warning: Removed 20 rows containing missing values (`geom_point()`).
autoQC01 module APEX long nrow: 2160
TPVISGGPYEYR, GTFIIDPGGVIR, GAGSSEPVTGLDAK, GTFIIDPAAVIR, VEATFGVDESNAK, YILAGVENSK, TPVITGAPYEYR, DGLDAASYYAPVR, ADVTPADFSEWSK
APEXAUC
Warning: Removed 2 rows containing missing values (`geom_point()`).
autoQC01 module APEX long nrow: 1296
TPVISGGPYEYR, GTFIIDPGGVIR, GAGSSEPVTGLDAK, GTFIIDPAAVIR, VEATFGVDESNAK, YILAGVENSK, TPVITGAPYEYR, DGLDAASYYAPVR, ADVTPADFSEWSK
APEXAUC
autoQC01 module APEX long nrow: 1440
TPVISGGPYEYR, GTFIIDPGGVIR, GAGSSEPVTGLDAK, GTFIIDPAAVIR, VEATFGVDESNAK, YILAGVENSK, TPVITGAPYEYR, DGLDAASYYAPVR, ADVTPADFSEWSK, LGGNEQVTR
APEXAUC
Warning: Removed 4 rows containing missing values (`geom_point()`).
Reading raw file: /srv/www/htdocs//p27367/Proteomics/LUMOS_1/zhouj_20231114/20231114_028_autoQC01.raw
length = 10
Plotting chromatograms ...
autoQC01 module APEX long nrow: 1584
TPVISGGPYEYR, GTFIIDPGGVIR, GAGSSEPVTGLDAK, GTFIIDPAAVIR, VEATFGVDESNAK, YILAGVENSK, TPVITGAPYEYR, DGLDAASYYAPVR, ADVTPADFSEWSK, LGGNEQVTR, LFLQFGAQGSPFLK
APEXAUC
Warning: Removed 14 rows containing missing values (`geom_point()`).
Reading raw file: /srv/www/htdocs//p27367/Proteomics/LUMOS_1/zhouj_20231114/20231114_028_autoQC01.raw
length = 11
Plotting chromatograms ...
autoQC01 module APEX long nrow: 1440
TPVISGGPYEYR, GTFIIDPGGVIR, GAGSSEPVTGLDAK, GTFIIDPAAVIR, VEATFGVDESNAK, YILAGVENSK, TPVITGAPYEYR, DGLDAASYYAPVR, ADVTPADFSEWSK, LGGNEQVTR
APEXAUC
Warning: Removed 4 rows containing missing values (`geom_point()`).
Reading raw file: /srv/www/htdocs//p27367/Proteomics/LUMOS_1/zhouj_20231114/20231114_028_autoQC01.raw
length = 10
Plotting chromatograms ...
autoQC01 module APEX long nrow: 1296
TPVISGGPYEYR, GTFIIDPGGVIR, GAGSSEPVTGLDAK, GTFIIDPAAVIR, VEATFGVDESNAK, YILAGVENSK, TPVITGAPYEYR, DGLDAASYYAPVR, ADVTPADFSEWSK
APEXAUC
Reading raw file: /srv/www/htdocs//p27367/Proteomics/LUMOS_1/zhouj_20231114/20231114_028_autoQC01.raw
length = 9
Plotting chromatograms ...