Listening on http://127.0.0.1:43527
Loading required package: shinydashboard

Attaching package: 'shinydashboard'

The following object is masked from 'package:graphics':

    box

Loading required package: readr
Loading required package: reshape2
Loading required package: lattice
Loading required package: rawrr
input timeRange: 7776000 | timeMin: 2023-10-30 15:08:10.802519 | timeMax: 2023-11-20 15:08:10.803173 | timeDiff: 1814400.00065398
Loading required package: bfabricShiny

Attaching package: 'bfabricShiny'

The following object is masked from 'package:base':

    save

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Warning: Error in combine_vars: Faceting variables must have at least one value
  184: <Anonymous>
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  181: rlang::abort
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input timeRange: 7776000 | timeMin: 2023-10-30 14:08:10.803 | timeMax: 2023-11-20 14:08:10.803 | timeDiff: 1814400
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autoQC01 module APEX wide nrow: 244585
autoQC01 module APEX long nrow: 324
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
APEXAUC
Warning: Removed 8 rows containing missing values (`geom_point()`).
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Warning: Using `size` aesthetic for lines was deprecated in ggplot2 3.4.0.
ℹ Please use `linewidth` instead.
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input timeRange: 7776000 | timeMin: 2023-09-19 14:08:12.213 | timeMax: 2023-11-20 14:08:10.803 | timeDiff: 5356798.58999991
autoQC01 module APEX long nrow: 1008
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
APEXAUC
Warning: Removed 28 rows containing missing values (`geom_point()`).
plot_click: 
plot_click: 
fn has changed to /srv/www/htdocs//NA
Plotting .missing() ...
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input timeRange: 7776000 | timeMin: 2023-10-30 15:09:19.009415 | timeMax: 2023-11-20 15:09:19.010051 | timeDiff: 1814400.00063539
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Warning: Error in combine_vars: Faceting variables must have at least one value
  184: <Anonymous>
  183: signalCondition
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  181: rlang::abort
  180: cli::cli_abort
  179: combine_vars
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plot_click: p32865/Proteomics/EXPLORIS_2/analytic_20231018/20231019_C32865_001_autoQC01.raw
plot_click: p32865/Proteomics/EXPLORIS_2/analytic_20231018/20231019_C32865_001_autoQC01.raw
fn has changed to /srv/www/htdocs//p32865/Proteomics/EXPLORIS_2/analytic_20231018/20231019_C32865_001_autoQC01.raw
Reading raw file: /srv/www/htdocs//p32865/Proteomics/EXPLORIS_2/analytic_20231018/20231019_C32865_001_autoQC01.raw
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Plotting chromatograms ...
autoQC01 module APEX wide nrow: 244585
autoQC01 module APEX long nrow: 324
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
APEXAUC
Warning: Removed 8 rows containing missing values (`geom_point()`).
plot_click: 
plot_click: 
fn has changed to /srv/www/htdocs//NA
Plotting .missing() ...
plot_click: p33281/Proteomics/EXPLORIS_2/analytic_20231114_m1_m2/20231114_C33281_040_autoQC01.raw
plot_click: p33281/Proteomics/EXPLORIS_2/analytic_20231114_m1_m2/20231114_C33281_040_autoQC01.raw
fn has changed to /srv/www/htdocs//p33281/Proteomics/EXPLORIS_2/analytic_20231114_m1_m2/20231114_C33281_040_autoQC01.raw
Reading raw file: /srv/www/htdocs//p33281/Proteomics/EXPLORIS_2/analytic_20231114_m1_m2/20231114_C33281_040_autoQC01.raw
length = 3
Plotting chromatograms ...
autoQC01 module APEX long nrow: 252
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
APEXAUC
Warning: Removed 24 rows containing missing values (`geom_point()`).
plot_click: 
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plot_click: p33212/Proteomics/LUMOS_2/leonardoschwarz_20231116/20231116_007_autoQC01.raw
fn has changed to /srv/www/htdocs//p33212/Proteomics/LUMOS_2/leonardoschwarz_20231116/20231116_007_autoQC01.raw
Reading raw file: /srv/www/htdocs//p33212/Proteomics/LUMOS_2/leonardoschwarz_20231116/20231116_007_autoQC01.raw
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Plotting chromatograms ...
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autoQC01 module APEX long nrow: 1125
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
APEXAUC
plot_click: p33212/Proteomics/LUMOS_2/leonardoschwarz_20231116/20231116_007_autoQC01.raw
Warning: Removed 42 rows containing missing values (`geom_point()`).
plot_click: 
plot_click: 
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plot_click: p33164/Proteomics/EXPLORIS_2/analytic_20231026/20231026_C33164_049_autoQC01.raw | plot_click: p33256/Proteomics/EXPLORIS_2/analytic_20231101/20231101_C33256_001_autoQC01.raw | plot_click: p33164/Proteomics/EXPLORIS_2/analytic_20231026/20231026_C33164_043_autoQC01.raw
fn has changed to /srv/www/htdocs//p33164/Proteomics/EXPLORIS_2/analytic_20231026/20231026_C33164_049_autoQC01.raw
Reading raw file: /srv/www/htdocs//p33164/Proteomics/EXPLORIS_2/analytic_20231026/20231026_C33164_049_autoQC01.raw
length = 3
Plotting chromatograms ...
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
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Warning: Error in combine_vars: Faceting variables must have at least one value
  184: <Anonymous>
  183: signalCondition
  182: signal_abort
  181: rlang::abort
  180: cli::cli_abort
  179: combine_vars
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Warning: Error in combine_vars: Faceting variables must have at least one value
  184: <Anonymous>
  183: signalCondition
  182: signal_abort
  181: rlang::abort
  180: cli::cli_abort
  179: combine_vars
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Warning: Error in combine_vars: Faceting variables must have at least one value
  184: <Anonymous>
  183: signalCondition
  182: signal_abort
  181: rlang::abort
  180: cli::cli_abort
  179: combine_vars
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  176: setup
  175: layout$setup
  174: ggplot_build.ggplot
  172: print.ggplot
  167: func
  165: f
  164: Reduce
  155: do
  154: hybrid_chain
  126: drawPlot
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   96: drawReactive
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autoQC01 module APEX wide nrow: 244585
autoQC01 module APEX long nrow: 234
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
APEXAUC
Warning: Removed 2 rows containing missing values (`geom_point()`).
Warning: Removed 2 rows containing missing values (`geom_point()`).
plot_click: p27367/Proteomics/LUMOS_1/zhouj_20231114/20231114_015_autoQC01.raw
plot_click: p27367/Proteomics/LUMOS_1/zhouj_20231114/20231114_015_autoQC01.raw
fn has changed to /srv/www/htdocs//p27367/Proteomics/LUMOS_1/zhouj_20231114/20231114_015_autoQC01.raw
Reading raw file: /srv/www/htdocs//p27367/Proteomics/LUMOS_1/zhouj_20231114/20231114_015_autoQC01.raw
length = 3
Plotting chromatograms ...
plot_click: p27367/Proteomics/LUMOS_1/zhouj_20231114/20231114_028_autoQC01.raw
plot_click: p27367/Proteomics/LUMOS_1/zhouj_20231114/20231114_028_autoQC01.raw
fn has changed to /srv/www/htdocs//p27367/Proteomics/LUMOS_1/zhouj_20231114/20231114_028_autoQC01.raw
Reading raw file: /srv/www/htdocs//p27367/Proteomics/LUMOS_1/zhouj_20231114/20231114_028_autoQC01.raw
length = 3
Plotting chromatograms ...
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