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Loading required package: shinydashboard

Attaching package: 'shinydashboard'

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input timeRange: 7776000 | timeMin: 2023-10-30 15:57:00.232088 | timeMax: 2023-11-20 15:57:00.232746 | timeDiff: 1814400.00065827
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Attaching package: 'bfabricShiny'

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    save

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Warning: Error in combine_vars: Faceting variables must have at least one value
  184: <Anonymous>
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  181: rlang::abort
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autoQC01 module APEX wide nrow: 244585
autoQC01 module APEX long nrow: 324
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
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autoQC01 module APEX long nrow: 27
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
APEXAUC
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autoQC01 module APEX long nrow: 72
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
APEXAUC
Warning: Removed 2 rows containing missing values (`geom_point()`).
Warning: Removed 1 row containing missing values (`geom_line()`).
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Plotting chromatograms ...
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autoQC01 module APEX long nrow: 19701
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
APEXAUC
plot_click: 
Warning: Removed 398 rows containing missing values (`geom_point()`).
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plot_click: p3000/Proteomics/LUMOS_2/lkunz_20200715_autoQC/20200715_02_autoQC01.raw | plot_click: p3000/Proteomics/LUMOS_2/lkunz_20200715_autoQC/20200715_02_autoQC01.raw
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Reading raw file: /srv/www/htdocs//p3000/Proteomics/LUMOS_2/lkunz_20200715_autoQC/20200715_02_autoQC01.raw
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Plotting chromatograms ...
Warning in predict.lm(fit, data.frame(xc = xx)) :
  prediction from rank-deficient fit; attr(*, "non-estim") has doubtful cases
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fn has changed to /srv/www/htdocs//p3417/Proteomics/LUMOS_2/cfortes_20200313_o6811/20200313_001_autoQC01.raw
Reading raw file: /srv/www/htdocs//p3417/Proteomics/LUMOS_2/cfortes_20200313_o6811/20200313_001_autoQC01.raw
length = 3
Plotting chromatograms ...
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fn has changed to /srv/www/htdocs//p3447/Proteomics/LUMOS_2/lkunz_20200207_o6682/20200207_012_autoQC01.raw
Reading raw file: /srv/www/htdocs//p3447/Proteomics/LUMOS_2/lkunz_20200207_o6682/20200207_012_autoQC01.raw
length = 3
Plotting chromatograms ...
nrow dataFiltered(): 12324
Warning: Using `size` aesthetic for lines was deprecated in ggplot2 3.4.0.
ℹ Please use `linewidth` instead.
nrow dataFiltered(): 162
input timeRange: 157680000 | timeMin: 2020-10-21 14:58:51.049 | timeMax: 2023-11-20 14:58:46.01 | timeDiff: 97199994.961
nrow dataFiltered(): 9438
nrow dataFiltered(): 162
input timeRange: 157680000 | timeMin: 2022-12-27 15:00:06.396 | timeMax: 2023-11-20 14:58:46.01 | timeDiff: 28339119.6140001
nrow dataFiltered(): 3120
nrow dataFiltered(): 162
nrow dataFiltered(): 3120
nrow dataFiltered(): 162
autoQC01 module APEX long nrow: 4149
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
APEXAUC
plot_click: 
Warning: Removed 152 rows containing missing values (`geom_point()`).