Listening on http://127.0.0.1:32867
Loading required package: shinydashboard

Attaching package: 'shinydashboard'

The following object is masked from 'package:graphics':

    box

Loading required package: readr
Loading required package: reshape2
Loading required package: lattice
Loading required package: rawrr
fn has changed to NA
input timeRange: 7776000 | timeMin: 2023-11-02 14:59:49.272588 | timeMax: 2023-11-23 14:59:49.273244 | timeDiff: 1814400.0006566
Loading required package: bfabricShiny

Attaching package: 'bfabricShiny'

The following object is masked from 'package:base':

    save

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autoQC01 module APEX wide nrow: 252241
autoQC01 module APEX long nrow: 444
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
APEXAUC.lg2
Warning: Removed 6 rows containing missing values (`geom_point()`).
autoQC01 module APEX long nrow: 336
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
APEXAUC.lg2
Warning: Removed 16 rows containing missing values (`geom_point()`).
Warning: Removed 3 rows containing missing values (`geom_line()`).
plot_click: p33448/Proteomics/LUMOS_2/analytic_20231121/20231121_C33448_005_autoQC01.raw
plot_click: p33448/Proteomics/LUMOS_2/analytic_20231121/20231121_C33448_005_autoQC01.raw
fn has changed to /srv/www/htdocs//p33448/Proteomics/LUMOS_2/analytic_20231121/20231121_C33448_005_autoQC01.raw
Reading raw file: /srv/www/htdocs//p33448/Proteomics/LUMOS_2/analytic_20231121/20231121_C33448_005_autoQC01.raw
length = 3
Plotting chromatograms ...
Read 22032 items
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fn has changed to NA
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LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
APEXAUC.lg2
Warning: Removed 6 rows containing missing values (`geom_point()`).
autoQC01 module APEX long nrow: 396
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
APEXAUC.lg2
Warning: Removed 14 rows containing missing values (`geom_point()`).
Warning: Removed 2 rows containing missing values (`geom_line()`).
autoQC01 module APEX long nrow: 456
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
APEXAUC.lg2
Warning: Removed 20 rows containing missing values (`geom_point()`).
Warning: Removed 1 row containing missing values (`geom_line()`).
fn has changed to NA
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LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
APEXAUC.lg2
Warning: Removed 6 rows containing missing values (`geom_point()`).
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fn has changed to NA
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Warning: Using `size` aesthetic for lines was deprecated in ggplot2 3.4.0.
ℹ Please use `linewidth` instead.


Execution halted