Listening on http://127.0.0.1:45311
Loading required package: shinydashboard

Attaching package: 'shinydashboard'

The following object is masked from 'package:graphics':

    box

Loading required package: readr
Loading required package: reshape2
Loading required package: lattice
Loading required package: rawrr
fn has changed to NA
fn has changed to NA
fn has changed to NA
input timeRange: 7776000 | timeMin: 2023-11-06 10:29:36.232821 | timeMax: 2023-11-27 10:29:36.234009 | timeDiff: 1814400.00118828
Loading required package: bfabricShiny

Attaching package: 'bfabricShiny'

The following object is masked from 'package:base':

    save

input timeRange: 7776000 | timeMin: 2023-11-06 09:29:36.233 | timeMax: 2023-11-27 09:29:36.234 | timeDiff: 1814400.00099993
nrow dataFiltered(): 54
nrow dataFiltered(): 130
p3000/Proteomics/EXPLORIS_2/analytic_20231113/20231113_005_autoQC4L_K562.raw
NA
p33344/Proteomics/EXPLORIS_2/analytic_20231110/20231110_C33344_007_autoQC4L.raw
plotClick: 
fn has changed to /srv/www/htdocs//p33344/Proteomics/EXPLORIS_2/analytic_20231110/20231110_C33344_007_autoQC4L.raw
Reading raw file: /srv/www/htdocs//p33344/Proteomics/EXPLORIS_2/analytic_20231110/20231110_C33344_007_autoQC4L.raw
Plotting chromatograms ...
Read 22032 items
p3000/Proteomics/EXPLORIS_2/analytic_20231124/20231124_C3000_024_autoQC03dia_2ul.raw
plotClick: 
fn has changed to /srv/www/htdocs//p3000/Proteomics/EXPLORIS_2/analytic_20231124/20231124_C3000_024_autoQC03dia_2ul.raw
Reading raw file: /srv/www/htdocs//p3000/Proteomics/EXPLORIS_2/analytic_20231124/20231124_C3000_024_autoQC03dia_2ul.raw
Plotting chromatograms ...
Read 22032 items
nrow dataFiltered(): 54
Warning: Using `size` aesthetic for lines was deprecated in ggplot2 3.4.0.
ℹ Please use `linewidth` instead.
nrow dataFiltered(): 130
p3000/Proteomics/EXPLORIS_2/analytic_20231124/20231124_C3000_025_autoQC03dia_2ul.raw
NA
p3000/Proteomics/EXPLORIS_2/analytic_20231124/20231124_C3000_024_autoQC03dia_2ul.raw
p3000/Proteomics/EXPLORIS_2/analytic_20231124/20231124_C3000_023_autoQC03dia_2ul.raw
p3000/Proteomics/EXPLORIS_2/analytic_20231124/20231124_C3000_023_autoQC03dia_2ul.raw
plotClick: 
fn has changed to /srv/www/htdocs//p3000/Proteomics/EXPLORIS_2/analytic_20231124/20231124_C3000_023_autoQC03dia_2ul.raw
Reading raw file: /srv/www/htdocs//p3000/Proteomics/EXPLORIS_2/analytic_20231124/20231124_C3000_023_autoQC03dia_2ul.raw
Plotting chromatograms ...
Read 22032 items
nrow dataFiltered(): 54
nrow dataFiltered(): 54
nrow dataFiltered(): 54
NA
input timeRange: 7776000 | timeMin: 2023-09-07 09:29:37.633 | timeMax: 2023-11-27 09:29:36.234 | timeDiff: 6998398.60100007
nrow dataFiltered(): 416
nrow dataFiltered(): 54
input timeRange: 31536000 | timeMin: 2023-09-07 09:29:37.633 | timeMax: 2023-11-27 10:32:42.895774 | timeDiff: 6998585.26277375
nrow dataFiltered(): 416
nrow dataFiltered(): 54
input timeRange: 31536000 | timeMin: 2023-09-07 09:29:37.633 | timeMax: 2023-11-27 09:32:42.896 | timeDiff: 6998585.26300001
nrow dataFiltered(): 416
nrow dataFiltered(): 54
nrow dataFiltered(): 416
nrow dataFiltered(): 416
nrow dataFiltered(): 416
NA
plotClick: 
fn has changed to /srv/www/htdocs//NA
Warning in renderUI() : raw file /srv/www/htdocs//NA does not exist.
Warning in normalizePath(rawfile) :
  path[1]="/srv/www/htdocs//NA": No such file or directory
Warning: Error in .checkRawFile: File '/srv/www/htdocs//NA'  is not available.
  100: stop
   99: .checkRawFile
   98: readFileHeader
   97: renderTable
   96: func
   83: renderFunc
   82: output$autoQC03-DDA-rawrr-autoQC03-fileHeader
    1: runApp
p3000/Proteomics/EXPLORIS_2/analytic_20231019/20231019_003_autoQC4L_K562.raw
plotClick: 
fn has changed to /srv/www/htdocs//p3000/Proteomics/EXPLORIS_2/analytic_20231019/20231019_003_autoQC4L_K562.raw
Reading raw file: /srv/www/htdocs//p3000/Proteomics/EXPLORIS_2/analytic_20231019/20231019_003_autoQC4L_K562.raw
Plotting chromatograms ...
Read 22032 items
NA
p3000/Proteomics/EXPLORIS_2/analytic_20231106/20231106_005_autoQC4L_K562.raw
p33256/Proteomics/EXPLORIS_2/analytic_20231101/20231101_C33256_015_autoQC4L.raw
NA
p33274/Proteomics/EXPLORIS_2/analytic_20231106/20231106_C33274_018_autoQC4L.raw
NA
p33171/Proteomics/EXPLORIS_2/analytic_20231124/20231124_C33171_006_autoQC4L.raw
p33324/Proteomics/EXPLORIS_2/analytic_20231124/20231124_C33324_022_autoQC4L.raw
autoQC01 module APEX wide nrow: 252846
autoQC01 module APEX long nrow: 1872
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
APEXAUC.lg2
Warning: Removed 46 rows containing missing values (`geom_point()`).
plot_click: p33122/Proteomics/EXPLORIS_2/analytic_20231025/20231025_C33122_010_autoQC01.raw
plot_click: p33122/Proteomics/EXPLORIS_2/analytic_20231025/20231025_C33122_010_autoQC01.raw
fn has changed to /srv/www/htdocs//p33122/Proteomics/EXPLORIS_2/analytic_20231025/20231025_C33122_010_autoQC01.raw
Reading raw file: /srv/www/htdocs//p33122/Proteomics/EXPLORIS_2/analytic_20231025/20231025_C33122_010_autoQC01.raw
Plotting chromatograms ...
Read 22032 items


Execution halted