Listening on http://127.0.0.1:34947 Loading required package: shinydashboard Attaching package: 'shinydashboard' The following object is masked from 'package:graphics': box Loading required package: readr Loading required package: reshape2 Loading required package: lattice Loading required package: rawrr fn has changed to NA fn has changed to NA fn has changed to NA input timeRange: 7776000 | timeMin: 2023-11-06 14:26:21.417179 | timeMax: 2023-11-27 14:26:21.41843 | timeDiff: 1814400.00125098 Loading required package: bfabricShiny Attaching package: 'bfabricShiny' The following object is masked from 'package:base': save input timeRange: 7776000 | timeMin: 2023-11-06 13:26:21.41718 | timeMax: 2023-11-27 13:26:21.41843 | timeDiff: 1814400.00125003 nrow dataFiltered(): 54 nrow dataFiltered(): 130 input timeRange: 7776000 | timeMin: 2023-11-06 13:26:21.417 | timeMax: 2023-11-27 13:26:21.418 | timeDiff: 1814400.00099993 nrow dataFiltered(): 130 nrow dataFiltered(): 54 nrow dataFiltered(): 0 nrow dataFiltered(): 0 nrow dataFiltered(): 78 nrow dataFiltered(): 0 p30646/Proteomics/EXPLORIS_1/gnarduzzi_20231113/20231113_010_autoQC4L.raw plotClick: fn has changed to /srv/www/htdocs//p30646/Proteomics/EXPLORIS_1/gnarduzzi_20231113/20231113_010_autoQC4L.raw Reading raw file: /srv/www/htdocs//p30646/Proteomics/EXPLORIS_1/gnarduzzi_20231113/20231113_010_autoQC4L.raw Plotting chromatograms ... Read 22032 items nrow dataFiltered(): 130 nrow dataFiltered(): 54 NA p33171/Proteomics/EXPLORIS_2/analytic_20231124/20231124_C33171_006_autoQC4L.raw plotClick: fn has changed to /srv/www/htdocs//p33171/Proteomics/EXPLORIS_2/analytic_20231124/20231124_C33171_006_autoQC4L.raw Reading raw file: /srv/www/htdocs//p33171/Proteomics/EXPLORIS_2/analytic_20231124/20231124_C33171_006_autoQC4L.raw Plotting chromatograms ... Read 22032 items plotClick: fn has changed to /srv/www/htdocs//p3000/Proteomics/EXPLORIS_2/analytic_20231124/20231124_C3000_024_autoQC03dia_2ul.raw p3000/Proteomics/EXPLORIS_2/analytic_20231124/20231124_C3000_024_autoQC03dia_2ul.raw Reading raw file: /srv/www/htdocs//p3000/Proteomics/EXPLORIS_2/analytic_20231124/20231124_C3000_024_autoQC03dia_2ul.raw Plotting chromatograms ... Read 22032 items NA p33171/Proteomics/EXPLORIS_2/analytic_20231124/20231124_C33171_006_autoQC4L.raw NA input timeRange: 63072000 | timeMin: 2023-11-06 13:26:21.417 | timeMax: 2023-11-27 14:28:18.947527 | timeDiff: 1814517.53052688 nrow dataFiltered(): 130 nrow dataFiltered(): 54 input timeRange: 63072000 | timeMin: 2023-11-06 13:26:21.417 | timeMax: 2023-11-27 13:28:18.948 | timeDiff: 1814517.5309999 nrow dataFiltered(): 130 nrow dataFiltered(): 54 input timeRange: 63072000 | timeMin: 2022-06-14 13:28:20.34 | timeMax: 2023-11-27 13:28:18.948 | timeDiff: 45878398.608 nrow dataFiltered(): 2587 nrow dataFiltered(): 54 p29593/Proteomics/EXPLORIS_2/analytic_20220928/20220928_C29593_006_autoQC4L.raw plotClick: fn has changed to /srv/www/htdocs//p29593/Proteomics/EXPLORIS_2/analytic_20220928/20220928_C29593_006_autoQC4L.raw Reading raw file: /srv/www/htdocs//p29593/Proteomics/EXPLORIS_2/analytic_20220928/20220928_C29593_006_autoQC4L.raw Plotting chromatograms ... Read 22032 items NA NA plotClick: p3000/Proteomics/EXPLORIS_2/analytic_20231124/20231124_C3000_024_autoQC03dia_2ul.raw NA plotClick: p3000/Proteomics/EXPLORIS_2/analytic_20231124/20231124_C3000_024_autoQC03dia_2ul.raw NA p3000/Proteomics/EXPLORIS_2/analytic_20231124/20231124_C3000_024_autoQC03dia_2ul.raw plotClick: plotClick: NA p3000/Proteomics/EXPLORIS_2/analytic_20231124/20231124_C3000_023_autoQC03dia_2ul.raw plotClick: fn has changed to /srv/www/htdocs//p3000/Proteomics/EXPLORIS_2/analytic_20231124/20231124_C3000_023_autoQC03dia_2ul.raw Reading raw file: /srv/www/htdocs//p3000/Proteomics/EXPLORIS_2/analytic_20231124/20231124_C3000_023_autoQC03dia_2ul.raw Plotting chromatograms ... Read 22032 items autoQC01 module APEX wide nrow: 252890 autoQC01 module APEX long nrow: 9876 LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK APEXAUC.lg2 Warning: Removed 112 rows containing missing values (`geom_point()`). fn has changed to NA fn has changed to NA fn has changed to NA input timeRange: 7776000 | timeMin: 2023-11-06 14:38:36.438738 | timeMax: 2023-11-27 14:38:36.440007 | timeDiff: 1814400.00126863 input timeRange: 7776000 | timeMin: 2023-11-06 13:38:36.439 | timeMax: 2023-11-27 13:38:36.44 | timeDiff: 1814400.00100017 autoQC01 module APEX wide nrow: 252890 autoQC01 module APEX long nrow: 528 LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK APEXAUC.lg2 Warning: Removed 20 rows containing missing values (`geom_point()`). nrow dataFiltered(): 54 nrow dataFiltered(): 130 p3000/Proteomics/EXPLORIS_2/analytic_20231124/20231124_C3000_024_autoQC03dia_2ul.raw plotClick: fn has changed to /srv/www/htdocs//p3000/Proteomics/EXPLORIS_2/analytic_20231124/20231124_C3000_024_autoQC03dia_2ul.raw Reading raw file: /srv/www/htdocs//p3000/Proteomics/EXPLORIS_2/analytic_20231124/20231124_C3000_024_autoQC03dia_2ul.raw Plotting chromatograms ... Read 22032 items Plotting chromatograms ... Plotting chromatograms ... Plotting chromatograms ... p3000/Proteomics/EXPLORIS_2/analytic_20231124/20231124_C3000_024_autoQC03dia_2ul.raw NA plotClick: fn has changed to /srv/www/htdocs//NA Warning in renderUI() : raw file /srv/www/htdocs//NA does not exist. nrow dataFiltered(): 54 Warning: Using `size` aesthetic for lines was deprecated in ggplot2 3.4.0. ℹ Please use `linewidth` instead. nrow dataFiltered(): 130 Plotting chromatograms ... fn has changed to NA fn has changed to NA fn has changed to NA input timeRange: 7776000 | timeMin: 2023-11-06 14:44:52.889122 | timeMax: 2023-11-27 14:44:52.890283 | timeDiff: 1814400.00116134 input timeRange: 7776000 | timeMin: 2023-11-06 13:44:52.889 | timeMax: 2023-11-27 13:44:52.89 | timeDiff: 1814400.00100017 nrow dataFiltered(): 54 nrow dataFiltered(): 130 NA plotClick: fn has changed to /srv/www/htdocs//p3000/Proteomics/EXPLORIS_2/analytic_20231121/20231121_005_autoQC4L_K562.raw p3000/Proteomics/EXPLORIS_2/analytic_20231121/20231121_005_autoQC4L_K562.raw Reading raw file: /srv/www/htdocs//p3000/Proteomics/EXPLORIS_2/analytic_20231121/20231121_005_autoQC4L_K562.raw Plotting chromatograms ... Read 22032 items NA p3000/Proteomics/EXPLORIS_2/analytic_20231124/20231124_C3000_024_autoQC03dia_2ul.raw plotClick: fn has changed to /srv/www/htdocs//p3000/Proteomics/EXPLORIS_2/analytic_20231124/20231124_C3000_024_autoQC03dia_2ul.raw Reading raw file: /srv/www/htdocs//p3000/Proteomics/EXPLORIS_2/analytic_20231124/20231124_C3000_024_autoQC03dia_2ul.raw Plotting chromatograms ... Read 22032 items NA fn has changed to NA fn has changed to NA fn has changed to NA input timeRange: 7776000 | timeMin: 2023-11-06 14:49:59.99297 | timeMax: 2023-11-27 14:49:59.993593 | timeDiff: 1814400.00062227 input timeRange: 7776000 | timeMin: 2023-11-06 13:49:59.993 | timeMax: 2023-11-27 13:49:59.994 | timeDiff: 1814400.00099993 autoQC01 module APEX wide nrow: 252890 autoQC01 module APEX long nrow: 528 LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK APEXAUC.lg2 Warning: Removed 20 rows containing missing values (`geom_point()`). nrow dataFiltered(): 54 nrow dataFiltered(): 130 p3000/Proteomics/EXPLORIS_2/analytic_20231113/20231113_005_autoQC4L_K562.raw plotClick: fn has changed to /srv/www/htdocs//p3000/Proteomics/EXPLORIS_2/analytic_20231113/20231113_005_autoQC4L_K562.raw Reading raw file: /srv/www/htdocs//p3000/Proteomics/EXPLORIS_2/analytic_20231113/20231113_005_autoQC4L_K562.raw Plotting chromatograms ... Read 22032 items fn has changed to NA fn has changed to NA fn has changed to NA input timeRange: 7776000 | timeMin: 2023-11-06 15:02:44.532118 | timeMax: 2023-11-27 15:02:44.5336 | timeDiff: 1814400.00148201 input timeRange: 7776000 | timeMin: 2023-11-06 14:02:44.532 | timeMax: 2023-11-27 14:02:44.534 | timeDiff: 1814400.00199986 autoQC01 module APEX wide nrow: 252890 autoQC01 module APEX long nrow: 348 LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK APEXAUC.lg2 Warning: Removed 6 rows containing missing values (`geom_point()`). nrow dataFiltered(): 144 nrow dataFiltered(): 598 NA Execution halted