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Loading required package: shinydashboard

Attaching package: 'shinydashboard'

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Loading required package: readr
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input timeRange: 7776000 | timeMin: 2023-11-06 16:46:12.231769 | timeMax: 2023-11-27 16:46:12.232415 | timeDiff: 1814400.00064659
Loading required package: bfabricShiny

Attaching package: 'bfabricShiny'

The following object is masked from 'package:base':

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input timeRange: 7776000 | timeMin: 2023-11-06 15:46:12.232 | timeMax: 2023-11-27 15:46:12.232 | timeDiff: 1814400
autoQC01 module APEX wide nrow: 252890
autoQC01 module APEX long nrow: 516
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
APEXAUC.lg2
Warning: Removed 20 rows containing missing values (`geom_point()`).
autoQC01 module APEX long nrow: 288
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
APEXAUC.lg2
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input timeRange: 7776000 | timeMin: 2023-09-08 15:46:13.5 | timeMax: 2023-11-27 15:46:12.232 | timeDiff: 6911998.73200011
autoQC01 module APEX long nrow: 1488
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
APEXAUC.lg2
Warning: Removed 34 rows containing missing values (`geom_point()`).
autoQC01 module APEX long nrow: 1488
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GAGSSEPVTGLDAK
APEXAUC.lg2
Warning: Removed 34 rows containing missing values (`geom_point()`).
autoQC01 module APEX long nrow: 1984
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GAGSSEPVTGLDAK
APEXAUC.lg2
Warning: Removed 38 rows containing missing values (`geom_point()`).
autoQC01 module APEX long nrow: 1984
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GAGSSEPVTGLDAK, DGLDAASYYAPVR
APEXAUC.lg2
Warning: Removed 38 rows containing missing values (`geom_point()`).
autoQC01 module APEX long nrow: 2480
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK, GAGSSEPVTGLDAK, DGLDAASYYAPVR
APEXAUC.lg2
Warning: Removed 38 rows containing missing values (`geom_point()`).
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p3000/Proteomics/LUMOS_2/cfortes_20230103/20230103_002_autoQC4L.raw
p3000/Proteomics/LUMOS_2/tobiasko_20230818_DIA/20230818_004_autoQC4L.raw
p3000/Proteomics/LUMOS_2/cfortes_20230103/20230103_002_autoQC4L.raw
plotClick: 
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Reading raw file: /srv/www/htdocs//p3000/Proteomics/LUMOS_2/cfortes_20230103/20230103_002_autoQC4L.raw
Plotting chromatograms ...
Read 22032 items
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p33448/Proteomics/LUMOS_2/analytic_20231121/20231121_C33448_006_autoQC4L_K562.raw
p32077/Proteomics/LUMOS_2/analytic_20230622/20230622_C32077_015_autoQC4L.raw
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nrow dataFiltered(): 1404
autoQC01 module APEX long nrow: 4080
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APEXAUC.lg2
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input timeRange: 7776000 | timeMin: 2023-11-06 17:04:00.174754 | timeMax: 2023-11-27 17:04:00.175368 | timeDiff: 1814400.00061464
input timeRange: 7776000 | timeMin: 2023-11-06 16:04:00.175 | timeMax: 2023-11-27 16:04:00.175 | timeDiff: 1814400
autoQC01 module APEX wide nrow: 252890
autoQC01 module APEX long nrow: 516
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
APEXAUC.lg2
Warning: Removed 20 rows containing missing values (`geom_point()`).
input timeRange: 7776000 | timeMin: 2023-11-06 16:04:00.772 | timeMax: 2023-11-27 16:04:00.175 | timeDiff: 1814399.40299988
autoQC01 module APEX long nrow: 516
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
APEXAUC.lg2
Warning: Removed 20 rows containing missing values (`geom_point()`).


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