Listening on http://127.0.0.1:37497 Loading required package: shinydashboard Attaching package: 'shinydashboard' The following object is masked from 'package:graphics': box Loading required package: readr Loading required package: reshape2 Loading required package: lattice Loading required package: rawrr fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA input timeRange: 7776000 | timeMin: 2023-11-07 15:25:04.278242 | timeMax: 2023-11-28 15:25:04.278874 | timeDiff: 1814400.00063133 Loading required package: bfabricShiny Attaching package: 'bfabricShiny' The following object is masked from 'package:base': save input timeRange: 7776000 | timeMin: 2023-11-07 14:25:04.278 | timeMax: 2023-11-28 14:25:04.279 | timeDiff: 1814400.00099993 autoQC01 module APEX wide nrow: 252967 autoQC01 module APEX long nrow: 456 LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK APEXAUC.lg2 Warning: Removed 20 rows containing missing values (`geom_point()`). nrow dataFiltered(): 54 nrow dataFiltered(): 104 nrow dataFiltered(): 1672 Warning: Removed 30 rows containing missing values (`geom_point()`). p33314/Proteomics/EXPLORIS_2/analytic_20231107/20231107_C33314_001_autoQC01.raw p33324/Proteomics/EXPLORIS_2/analytic_20231108/20231108_C33324_021_autoQC01.raw NA p33356/Proteomics/EXPLORIS_2/analytic_20231113/20231113_C33356_012_autoQC01.raw plotClick: fn has changed to /srv/www/htdocs//p33356/Proteomics/EXPLORIS_2/analytic_20231113/20231113_C33356_012_autoQC01.raw Reading raw file: /srv/www/htdocs//p33356/Proteomics/EXPLORIS_2/analytic_20231113/20231113_C33356_012_autoQC01.raw Plotting chromatograms ... Read 22032 items fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA Warning: Error in if: missing value where TRUE/FALSE needed 1: runApp input timeRange: 1209600 | timeMin: 2023-11-21 15:52:21.259526 | timeMax: 2023-11-28 15:52:21.259554 | timeDiff: 604800.00002861 fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA input timeRange: 7776000 | timeMin: 2023-11-07 15:52:24.016135 | timeMax: 2023-11-28 15:52:24.016732 | timeDiff: 1814400.00059652 autoQC01 module APEX wide nrow: 252978 input timeRange: 7776000 | timeMin: 2023-11-07 14:52:24.016 | timeMax: 2023-11-28 14:52:24.017 | timeDiff: 1814400.00099993 autoQC01 module APEX long nrow: 456 LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK APEXAUC.lg2 Warning: Removed 20 rows containing missing values (`geom_point()`). autoQC01 module APEX long nrow: 540 LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK APEXAUC.lg2 Warning: Removed 14 rows containing missing values (`geom_point()`). NA p26433/Proteomics/LUMOS_1/baytekbarbini_20231127/20231127_009_autoQC01.raw NA p26433/Proteomics/LUMOS_1/baytekbarbini_20231127/20231127_009_autoQC01.raw Warning: Using `size` aesthetic for lines was deprecated in ggplot2 3.4.0. ℹ Please use `linewidth` instead. Warning: Removed 14 rows containing missing values (`geom_point()`).