Listening on http://127.0.0.1:45385
Loading required package: shinydashboard

Attaching package: 'shinydashboard'

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    box

Loading required package: readr
Loading required package: reshape2
Loading required package: lattice
Loading required package: rawrr
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Warning: Error in if: argument is of length zero
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  82: output$__autoQC01__-ui
   1: runApp
input timeRange: 7776000 | timeMin: 2023-11-09 08:02:44.516002 | timeMax: 2023-11-30 08:02:44.517324 | timeDiff: 1814400.00132155
Loading required package: bfabricShiny

Attaching package: 'bfabricShiny'

The following object is masked from 'package:base':

    save

input timeRange: 7776000 | timeMin: 2023-11-09 07:02:44.516 | timeMax: 2023-11-30 07:02:44.517 | timeDiff: 1814400.00099993
nrow dataFiltered(): 1496
Warning: Removed 30 rows containing missing values (`geom_point()`).
reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt
nrow dataFiltered(): 54
nrow dataFiltered(): 117
nrow dataFiltered(): 1320
Warning: Removed 10 rows containing missing values (`geom_point()`).
p33066/Proteomics/EXPLORIS_1/pmanet_20231128/20231128_001_autoQC01_QC.raw
plotClick: 
fn has changed to /srv/www/htdocs//p33066/Proteomics/EXPLORIS_1/pmanet_20231128/20231128_001_autoQC01_QC.raw
plotClick: 
p33066/Proteomics/EXPLORIS_1/pmanet_20231128/20231128_015_autoQC01.raw
p33066/Proteomics/EXPLORIS_1/pmanet_20231128/20231128_001_autoQC01_QC.raw
Reading raw file: /srv/www/htdocs//p33066/Proteomics/EXPLORIS_1/pmanet_20231128/20231128_001_autoQC01_QC.raw
Plotting chromatograms ...
Read 22032 items
nrow dataFiltered(): 0
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nrow dataFiltered(): 72
NA
p33383/Proteomics/TIMSTOF_1/spfammatter_20231128_/zip/20231128_002_autoQC03diaPASEF.d.zip
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Warning: Error in if: argument is of length zero
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   1: runApp
Warning: Error in if: missing value where TRUE/FALSE needed
  1: runApp
input timeRange: 1209600 | timeMin: 2023-11-23 09:07:23.156243 | timeMax: 2023-11-30 09:07:23.156303 | timeDiff: 604800.00006032
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Warning: Error in if: argument is of length zero
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   1: runApp
input timeRange: 7776000 | timeMin: 2023-11-09 09:26:02.718701 | timeMax: 2023-11-30 09:26:02.719318 | timeDiff: 1814400.00061703
input timeRange: 7776000 | timeMin: 2023-11-09 08:26:02.719 | timeMax: 2023-11-30 08:26:02.719 | timeDiff: 1814400
reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt
nrow dataFiltered(): 162
nrow dataFiltered(): 754
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Warning: Error in if: argument is of length zero
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   1: runApp
input timeRange: 7776000 | timeMin: 2023-11-09 09:27:11.40531 | timeMax: 2023-11-30 09:27:11.406826 | timeDiff: 1814400.00151682
input timeRange: 7776000 | timeMin: 2023-11-09 08:27:11.405 | timeMax: 2023-11-30 08:27:11.407 | timeDiff: 1814400.00200009
reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt
nrow dataFiltered(): 54
nrow dataFiltered(): 117
nrow dataFiltered(): 754
nrow dataFiltered(): 162
NA
plotClick: 
fn has changed to /srv/www/htdocs//p3000/Proteomics/FUSION_2/chiawei_20231128/20231128_003_autoQC03dia.raw
p3000/Proteomics/FUSION_2/chiawei_20231128/20231128_003_autoQC03dia.raw
Reading raw file: /srv/www/htdocs//p3000/Proteomics/FUSION_2/chiawei_20231128/20231128_003_autoQC03dia.raw
Plotting chromatograms ...
Read 22032 items
NA
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Warning: Error in if: argument is of length zero
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   1: runApp
input timeRange: 7776000 | timeMin: 2023-11-09 09:31:06.330347 | timeMax: 2023-11-30 09:31:06.332416 | timeDiff: 1814400.00206923
input timeRange: 7776000 | timeMin: 2023-11-09 08:31:06.33 | timeMax: 2023-11-30 08:31:06.332 | timeDiff: 1814400.00200009
reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt
nrow dataFiltered(): 54
nrow dataFiltered(): 117
NA


Execution halted