Listening on http://127.0.0.1:33123 Loading required package: shinydashboard Attaching package: 'shinydashboard' The following object is masked from 'package:graphics': box Loading required package: readr Loading required package: reshape2 Loading required package: lattice Loading required package: rawrr fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2023-11-13 16:46:12.369679 | timeMax: 2023-12-04 16:46:12.370311 | timeDiff: 1814400.00063229 Loading required package: bfabricShiny Attaching package: 'bfabricShiny' The following object is masked from 'package:base': save nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp nFacets: 4 nrow dataFiltered(): 464 Warning: Removed 10 rows containing missing values (`geom_point()`). input timeRange: 7776000 | timeMin: 2023-11-13 15:46:12.37 | timeMax: 2023-12-04 15:46:12.37 | timeDiff: 1814400 nFacets: 4 nrow dataFiltered(): 464 Warning: Removed 10 rows containing missing values (`geom_point()`). nFacets: 1 reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt nFacets: 1 nrow dataFiltered(): 54 nrow dataFiltered(): 91 NA plotClick: fn has changed to /srv/www/htdocs//NA Warning in renderUI() : raw file /srv/www/htdocs//NA does not exist. autoQC01 module APEX wide nrow: 253825 autoQC01 module APEX long nrow: 348 LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK APEXAUC.lg2 Warning: Removed 20 rows containing missing values (`geom_point()`). plotClick: fn has changed to /srv/www/htdocs//p33552/Proteomics/EXPLORIS_2/analytic_20231130/20231130_C33552_011_autoQC01.raw p33552/Proteomics/EXPLORIS_2/analytic_20231130/20231130_C33552_011_autoQC01.raw Reading raw file: /srv/www/htdocs//p33552/Proteomics/EXPLORIS_2/analytic_20231130/20231130_C33552_011_autoQC01.raw Plotting chromatograms ... Read 22032 items NA nrow dataFiltered(): 464 Warning: Removed 10 rows containing missing values (`geom_point()`). Plotting chromatograms ... Read 22032 items nrow dataFiltered(): 464 Warning: Removed 10 rows containing missing values (`geom_point()`). Plotting chromatograms ... Read 22032 items fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2023-11-13 17:11:47.570321 | timeMax: 2023-12-04 17:11:47.570921 | timeDiff: 1814400.00059986 nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp nFacets: 4 nrow dataFiltered(): 464 Warning: Removed 10 rows containing missing values (`geom_point()`). input timeRange: 7776000 | timeMin: 2023-11-13 16:11:47.57 | timeMax: 2023-12-04 16:11:47.571 | timeDiff: 1814400.00100017 nFacets: 4 nrow dataFiltered(): 464 Warning: Removed 10 rows containing missing values (`geom_point()`). fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2023-11-13 17:14:55.578679 | timeMax: 2023-12-04 17:14:55.579265 | timeDiff: 1814400.00058579 nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp nFacets: 4 nrow dataFiltered(): 464 Warning: Removed 10 rows containing missing values (`geom_point()`). input timeRange: 7776000 | timeMin: 2023-11-13 16:14:55.579 | timeMax: 2023-12-04 16:14:55.579 | timeDiff: 1814400 nFacets: 4 nrow dataFiltered(): 464 Warning: Removed 10 rows containing missing values (`geom_point()`). nFacets: 5 nrow dataFiltered(): 580 Warning: Removed 15 rows containing missing values (`geom_point()`). NA Execution halted