Listening on http://127.0.0.1:36333 Loading required package: shinydashboard Attaching package: 'shinydashboard' The following object is masked from 'package:graphics': box Loading required package: readr Loading required package: reshape2 Loading required package: lattice Loading required package: rawDiag Loading required package: rawrr fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2023-11-27 15:20:30.678064 | timeMax: 2023-12-18 15:20:30.678658 | timeDiff: 1814400.00059414 Loading required package: bfabricShiny Attaching package: 'bfabricShiny' The following object is masked from 'package:base': save nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 672 input timeRange: 7776000 | timeMin: 2023-11-27 14:20:30.678 | timeMax: 2023-12-18 14:20:30.679 | timeDiff: 1814400.00099993 nFacets: 4 nrow dataFiltered(): 672 nFacets: 1 reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt nFacets: 1 vals$rawrr: FALSE vals$rawDiag: FALSE vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 90 nrow dataFiltered(): 78 NA nFacets: 1 nrow dataFiltered(): 416 nFacets: 1 nrow dataFiltered(): 198 fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp Warning: Error in if: missing value where TRUE/FALSE needed 1: runApp input timeRange: 1209600 | timeMin: 2023-12-11 15:25:31.493933 | timeMax: 2023-12-18 15:25:31.493971 | timeDiff: 604800.000037909 nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp Warning: Error in if: missing value where TRUE/FALSE needed 1: runApp input timeRange: 1209600 | timeMin: 2023-12-11 15:25:35.3102 | timeMax: 2023-12-18 15:25:35.310231 | timeDiff: 604800.000030279 nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2023-11-27 16:51:35.244498 | timeMax: 2023-12-18 16:51:35.24602 | timeDiff: 1814400.00152111 nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp nFacets: 1 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$autoQC03-DDA-ui 1: runApp reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt nFacets: 1 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$autoQC03-DIA-ui 1: runApp nFacets: 1 nFacets: 1 vals$rawrr: FALSE vals$rawDiag: FALSE vals$rawrr: FALSE vals$rawDiag: FALSE input timeRange: 7776000 | timeMin: 2023-11-27 15:51:35.2445 | timeMax: 2023-12-18 15:51:35.24602 | timeDiff: 1814400.00152016 nFacets: 1 nFacets: 1 input timeRange: 7776000 | timeMin: 2023-11-27 15:51:35.245 | timeMax: 2023-12-18 15:51:35.246 | timeDiff: 1814400.00100017 nFacets: 1 nFacets: 1 nrow dataFiltered(): 90 nrow dataFiltered(): 78 nFacets: 1 nrow dataFiltered(): 416 nFacets: 1 nrow dataFiltered(): 198 fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2023-11-27 16:52:39.74324 | timeMax: 2023-12-18 16:52:39.745078 | timeDiff: 1814400.00183821 nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp nFacets: 1 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$autoQC03-DDA-ui 1: runApp reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt nFacets: 1 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$autoQC03-DIA-ui 1: runApp nFacets: 1 nFacets: 1 vals$rawrr: FALSE vals$rawDiag: FALSE vals$rawrr: FALSE vals$rawDiag: FALSE input timeRange: 7776000 | timeMin: 2023-11-27 15:52:39.74324 | timeMax: 2023-12-18 15:52:39.74508 | timeDiff: 1814400.00184011 nFacets: 1 nFacets: 1 nrow dataFiltered(): 90 nrow dataFiltered(): 78 input timeRange: 7776000 | timeMin: 2023-11-27 15:52:39.743 | timeMax: 2023-12-18 15:52:39.745 | timeDiff: 1814400.00199986 nFacets: 1 nrow dataFiltered(): 78 nFacets: 1 nrow dataFiltered(): 90 nrow dataFiltered(): 78 nrow dataFiltered(): 78 nrow dataFiltered(): 78 nrow dataFiltered(): 78 NA nFacets: 1 nrow dataFiltered(): 416 nFacets: 1 nrow dataFiltered(): 198 nrow dataFiltered(): 416 NA plotClick: fn has changed to /srv/www/htdocs//NA plotClick: plotClick: plotClick: plotClick: plotClick: plotClick: p33212/Proteomics/FUSION_2/chiawei_20231215/20231215_003_autoQC03dia_2.raw plotClick: fn has changed to /srv/www/htdocs//p33212/Proteomics/FUSION_2/chiawei_20231215/20231215_003_autoQC03dia_2.raw NA p33212/Proteomics/FUSION_2/chiawei_20231215/20231215_002_autoQC03dia_1_20231215122111.raw p33212/Proteomics/FUSION_2/chiawei_20231215/20231215_003_autoQC03dia_2.raw plotClick: plotClick: NA plotClick: p33212/Proteomics/FUSION_2/chiawei_20231215/20231215_003_autoQC03dia_2.raw plotClick: NA p33212/Proteomics/FUSION_2/chiawei_20231124/20231124_002_S580219_K562_incl_iRT_2_autoQC03dia.raw NA Warning in observe() : timeDiff is higher than timeRange input timeRange: 7776000 | timeMin: 2023-12-07 15:52:43.82 | timeMax: 2023-12-18 15:52:39.745 | timeDiff: 950395.924999952 nFacets: 1 nrow dataFiltered(): 156 nFacets: 1 nrow dataFiltered(): 162 input timeRange: 63072000 | timeMin: 2023-11-27 16:56:02.324239 | timeMax: 2023-12-18 16:56:02.342782 | timeDiff: 1814400.01854372 nFacets: 1 nrow dataFiltered(): 416 nFacets: 1 nrow dataFiltered(): 198 input timeRange: 63072000 | timeMin: 2023-11-27 15:56:02.324 | timeMax: 2023-12-18 15:56:02.343 | timeDiff: 1814400.01900005 nFacets: 1 nrow dataFiltered(): 416 nFacets: 1 nrow dataFiltered(): 198 input timeRange: 15552000 | timeMin: 2023-11-27 15:56:02.324 | timeMax: 2023-12-18 16:56:09.967738 | timeDiff: 1814407.64373851 nFacets: 1 nrow dataFiltered(): 416 nFacets: 1 nrow dataFiltered(): 198 input timeRange: 15552000 | timeMin: 2023-11-27 15:56:02.324 | timeMax: 2023-12-18 15:56:09.968 | timeDiff: 1814407.64400005 nFacets: 1 nrow dataFiltered(): 416 nFacets: 1 nrow dataFiltered(): 198 input timeRange: 2592000 | timeMin: 2023-11-27 15:56:02.324 | timeMax: 2023-12-18 16:56:19.239273 | timeDiff: 1814416.91527295 nFacets: 1 nrow dataFiltered(): 416 nFacets: 1 nrow dataFiltered(): 198 input timeRange: 2592000 | timeMin: 2023-11-27 15:56:02.324 | timeMax: 2023-12-18 15:56:19.239 | timeDiff: 1814416.9150002 nFacets: 1 nrow dataFiltered(): 416 nFacets: 1 nrow dataFiltered(): 198 Warning in observe() : timeDiff is higher than timeRange input timeRange: 2592000 | timeMin: 2023-12-15 15:56:23.165 | timeMax: 2023-12-18 15:56:19.239 | timeDiff: 259196.07400012 nFacets: 1 nrow dataFiltered(): 52 `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? nFacets: 1 nrow dataFiltered(): 18 `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? input timeRange: 2592000 | timeMin: 2023-12-12 15:56:43.954 | timeMax: 2023-12-18 15:56:19.239 | timeDiff: 518375.285000086 nFacets: 1 nrow dataFiltered(): 104 nFacets: 1 nrow dataFiltered(): 90 fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp Warning: Error in if: missing value where TRUE/FALSE needed 1: runApp input timeRange: 1209600 | timeMin: 2023-12-11 18:53:09.950652 | timeMax: 2023-12-18 18:53:09.950812 | timeDiff: 604800.00015974 nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2023-11-27 18:53:28.73827 | timeMax: 2023-12-18 18:53:28.740942 | timeDiff: 1814400.00267243 nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp nFacets: 1 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$autoQC03-DDA-ui 1: runApp reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt nFacets: 1 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$autoQC03-DIA-ui 1: runApp nFacets: 1 nFacets: 1 vals$rawrr: FALSE vals$rawDiag: FALSE vals$rawrr: FALSE vals$rawDiag: FALSE input timeRange: 7776000 | timeMin: 2023-11-27 17:53:28.73827 | timeMax: 2023-12-18 17:53:28.74094 | timeDiff: 1814400.00266981 nFacets: 1 nFacets: 1 input timeRange: 7776000 | timeMin: 2023-11-27 17:53:28.738 | timeMax: 2023-12-18 17:53:28.741 | timeDiff: 1814400.00300002 nFacets: 1 nFacets: 1 nrow dataFiltered(): 90 nrow dataFiltered(): 78 nrow dataFiltered(): 78 p33599/Proteomics/EXPLORIS_2/analytic_20231212/20231212_C33599_019_autoQC03dda.raw NA p3000/Proteomics/EXPLORIS_2/analytic_20231218/20231218_005_autoQC4L_K562.raw NA fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp Warning: Error in if: missing value where TRUE/FALSE needed 1: runApp input timeRange: 1209600 | timeMin: 2023-12-11 18:56:47.498333 | timeMax: 2023-12-18 18:56:47.498491 | timeDiff: 604800.000158072 nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2023-11-27 19:15:32.090958 | timeMax: 2023-12-18 19:15:32.099896 | timeDiff: 1814400.00893855 nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp nFacets: 4 input timeRange: 7776000 | timeMin: 2023-11-27 18:15:32.091 | timeMax: 2023-12-18 18:15:32.1 | timeDiff: 1814400.00899982 nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 672 fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2023-11-28 07:06:42.567572 | timeMax: 2023-12-19 07:06:42.568236 | timeDiff: 1814400.00066423 nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp nFacets: 1 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$autoQC03-DDA-ui 1: runApp reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt Warning: One or more parsing issues, call `problems()` on your data frame for details, e.g.: dat <- vroom(...) problems(dat) nFacets: 1 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$autoQC03-DIA-ui 1: runApp nFacets: 1 nFacets: 1 vals$rawrr: FALSE vals$rawDiag: FALSE vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 90 nrow dataFiltered(): 78 input timeRange: 7776000 | timeMin: 2023-11-28 06:06:42.56757 | timeMax: 2023-12-19 06:06:42.56824 | timeDiff: 1814400.00066996 nFacets: 1 nrow dataFiltered(): 78 nFacets: 1 nrow dataFiltered(): 90 input timeRange: 7776000 | timeMin: 2023-11-28 06:06:42.568 | timeMax: 2023-12-19 06:06:42.568 | timeDiff: 1814400 nFacets: 1 nrow dataFiltered(): 78 nFacets: 1 nrow dataFiltered(): 90 nFacets: 1 nrow dataFiltered(): 0 nFacets: 1 nrow dataFiltered(): 216 NA fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2023-11-28 08:43:07.320696 | timeMax: 2023-12-19 08:43:07.321365 | timeDiff: 1814400.00066924 nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 672 input timeRange: 7776000 | timeMin: 2023-11-28 07:43:07.321 | timeMax: 2023-12-19 07:43:07.321 | timeDiff: 1814400 nFacets: 4 nrow dataFiltered(): 672 fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2023-11-28 08:43:29.633216 | timeMax: 2023-12-19 08:43:29.633794 | timeDiff: 1814400.00057745 nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 672 input timeRange: 7776000 | timeMin: 2023-11-28 07:43:29.633 | timeMax: 2023-12-19 07:43:29.634 | timeDiff: 1814400.00100017 nFacets: 4 nrow dataFiltered(): 672 NA nFacets: 1 reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt Warning: One or more parsing issues, call `problems()` on your data frame for details, e.g.: dat <- vroom(...) problems(dat) nFacets: 1 vals$rawrr: FALSE vals$rawDiag: FALSE vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 90 nrow dataFiltered(): 78 nFacets: 1 reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt Warning: One or more parsing issues, call `problems()` on your data frame for details, e.g.: dat <- vroom(...) problems(dat) nFacets: 1 vals$rawrr: FALSE vals$rawDiag: FALSE vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 90 nrow dataFiltered(): 78 NA nrow dataFiltered(): 78 nrow dataFiltered(): 90 nrow dataFiltered(): 78 nrow dataFiltered(): 78 nrow dataFiltered(): 78 nFacets: 1 nrow dataFiltered(): 208 nFacets: 1 nrow dataFiltered(): 90 nFacets: 1 nrow dataFiltered(): 208 nFacets: 1 nrow dataFiltered(): 144 nrow dataFiltered(): 144 nrow dataFiltered(): 208 NA nFacets: 1 nrow dataFiltered(): 208 nFacets: 1 nrow dataFiltered(): 90 nrow dataFiltered(): 208 vals$rawDiag: TRUE p33686/Proteomics/LUMOS_1/analytic_20231218/20231218_C33686_007_autoQC03dda.raw plotClick: fn has changed to /srv/www/htdocs//p33686/Proteomics/LUMOS_1/analytic_20231218/20231218_C33686_007_autoQC03dda.raw plotChargeState Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$autoQC03-DDA-rawDiag-autoQC03-plot 1: runApp reading index for 20231218_C33686_007_autoQC03dda.raw... Warning in validate_read.raw(rawrrIndex) : Missing column FTResolution. Warning in validate_read.raw(rawrrIndex) : Missing column LMCorrection. Warning in validate_read.raw(rawrrIndex) : Missing column PrescanMode. plotLockMassCorrection plotInjectionTime plotTicBasepeak NA vals$rawDiag: TRUE nrow dataFiltered(): 208 p33686/Proteomics/LUMOS_1/analytic_20231218/20231218_C33686_007_autoQC03dda.raw plotClick: fn has changed to /srv/www/htdocs//p33686/Proteomics/LUMOS_1/analytic_20231218/20231218_C33686_007_autoQC03dda.raw plotChargeState reading index for 20231218_C33686_007_autoQC03dda.raw... Warning in validate_read.raw(rawrrIndex) : Missing column FTResolution. Warning in validate_read.raw(rawrrIndex) : Missing column LMCorrection. Warning in validate_read.raw(rawrrIndex) : Missing column PrescanMode. p33686/Proteomics/LUMOS_1/analytic_20231218/20231218_C33686_007_autoQC03dda.raw nFacets: 1 nrow dataFiltered(): 78 nFacets: 1 nrow dataFiltered(): 90 NA nrow dataFiltered(): 78 p3000/Proteomics/EXPLORIS_2/analytic_20231218/20231218_005_autoQC4L_K562.raw p33599/Proteomics/EXPLORIS_2/analytic_20231212/20231212_C33599_019_autoQC03dda.raw NA nFacets: 1 nrow dataFiltered(): 208 nFacets: 1 nrow dataFiltered(): 90 nrow dataFiltered(): 208 p33686/Proteomics/LUMOS_1/analytic_20231218/20231218_C33686_007_autoQC03dda.raw NA p33686/Proteomics/LUMOS_1/analytic_20231218/20231218_C33686_007_autoQC03dda.raw p33686/Proteomics/LUMOS_1/analytic_20231218/20231218_C33686_007_autoQC03dda.raw p3000/Proteomics/LUMOS_1/pgehrig_20231211_autoQC/20231211_37_autoQC03dda_autoQC4L.raw NA plotClick: fn has changed to /srv/www/htdocs//NA Warning in renderUI() : raw file /srv/www/htdocs//NA does not exist. p33595/Proteomics/LUMOS_1/eichenberger_20231208/20231208_048_autoQC03dda_autoQC4L.raw p33686/Proteomics/LUMOS_1/analytic_20231218/20231218_C33686_007_autoQC03dda.raw p33686/Proteomics/LUMOS_1/analytic_20231218/20231218_C33686_007_autoQC03dda.raw p3000/Proteomics/LUMOS_1/pgehrig_20231211_autoQC/20231211_37_autoQC03dda_autoQC4L.raw p3000/Proteomics/LUMOS_1/pgehrig_20231211_autoQC/20231211_37_autoQC03dda_autoQC4L.raw NA p33686/Proteomics/LUMOS_1/analytic_20231218/20231218_C33686_007_autoQC03dda.raw p33686/Proteomics/LUMOS_1/analytic_20231218/20231218_C33686_007_autoQC03dda.raw p33595/Proteomics/LUMOS_1/eichenberger_20231208/20231208_048_autoQC03dda_autoQC4L.raw p3000/Proteomics/LUMOS_1/pgehrig_20231211_autoQC/20231211_37_autoQC03dda_autoQC4L.raw p3000/Proteomics/LUMOS_1/pgehrig_20231211_autoQC/20231211_37_autoQC03dda_autoQC4L.raw p3000/Proteomics/LUMOS_1/pgehrig_20231211_autoQC/20231211_37_autoQC03dda_autoQC4L.raw p33595/Proteomics/LUMOS_1/eichenberger_20231208/20231208_048_autoQC03dda_autoQC4L.raw autoQC01 module APEX wide nrow: 255640 autoQC01 module APEX long nrow: 648 LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK APEXAUC.lg2 Warning: Removed 30 rows containing missing values (`geom_point()`). Warning: Removed 1 row containing missing values (`geom_line()`). NA p29369/Proteomics/LUMOS_1/moslu_20231205_231212_TTTS_samples/20231205_038_autoQC01.raw plotClick: NA p3000/Proteomics/LUMOS_1/pgehrig_20231211_autoQC/20231211_37_autoQC03dda_autoQC4L.raw NA p33595/Proteomics/LUMOS_1/eichenberger_20231208/20231208_048_autoQC03dda_autoQC4L.raw autoQC01 module APEX wide nrow: 255640 autoQC01 module APEX long nrow: 648 LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK APEXAUC.lg2 Warning: Removed 30 rows containing missing values (`geom_point()`). Warning: Removed 1 row containing missing values (`geom_line()`). p33595/Proteomics/LUMOS_1/eichenberger_20231208/20231208_048_autoQC03dda_autoQC4L.raw p33686/Proteomics/LUMOS_1/analytic_20231218/20231218_C33686_007_autoQC03dda.raw p33595/Proteomics/LUMOS_1/eichenberger_20231208/20231208_048_autoQC03dda_autoQC4L.raw p33595/Proteomics/LUMOS_1/eichenberger_20231208/20231208_048_autoQC03dda_autoQC4L.raw NA nFacets: 1 nrow dataFiltered(): 208 nFacets: 1 nrow dataFiltered(): 144 nFacets: 1 nrow dataFiltered(): 91 nFacets: 1 nrow dataFiltered(): 36 nrow dataFiltered(): 91 nrow dataFiltered(): 90 NA p30646/Proteomics/EXPLORIS_1/gnarduzzi_20231204/20231204_056_autoQC03dda.raw NA