Listening on http://127.0.0.1:35501
Loading required package: shinydashboard

Attaching package: 'shinydashboard'

The following object is masked from 'package:graphics':

    box

Loading required package: readr
Loading required package: reshape2
Loading required package: lattice
Loading required package: rawDiag
Loading required package: rawrr
fn has changed to NA
fn has changed to NA
fn has changed to NA
fn has changed to NA
nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
input timeRange: 7776000 | timeMin: 2023-11-28 10:33:32.182001 | timeMax: 2023-12-19 10:33:32.18307 | timeDiff: 1814400.00106955
Loading required package: bfabricShiny

Attaching package: 'bfabricShiny'

The following object is masked from 'package:base':

    save

nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
nFacets: 0
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$autoQC03-DDA-ui
   1: runApp
reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt
Warning: One or more parsing issues, call `problems()` on your data frame for
details, e.g.:
  dat <- vroom(...)
  problems(dat)
nFacets: 1
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$autoQC03-DIA-ui
   1: runApp
nFacets: 4
vals$rawrr: FALSE
vals$rawDiag: FALSE
input timeRange: 7776000 | timeMin: 2023-11-28 09:33:32.182 | timeMax: 2023-12-19 09:33:32.183 | timeDiff: 1814400.00100017
nFacets: 4
input timeRange: 7776000 | timeMin: 2023-11-28 09:33:32.182 | timeMax: 2023-12-19 09:33:32.18307 | timeDiff: 1814400.00107026
nFacets: 4
nrow dataFiltered(): 672
Loading required package: ggh4x
Loading required package: ggplot2
using 'ggh4x' package ...
NA
vals$rawDiag: TRUE
p3000/Proteomics/EXPLORIS_2/analytic_20231211/20231211_002_autoQC01.raw
plotClick: 
fn has changed to /srv/www/htdocs//p3000/Proteomics/EXPLORIS_2/analytic_20231211/20231211_002_autoQC01.raw
plotChargeState
Warning: Error in graphics::plot.new: figure margins too large
  130: graphics::plot.new
  127: startPNG
  126: drawPlot
  112: <reactive:plotObj>
   96: drawReactive
   83: renderFunc
   82: output$__autoQC01__-rawDiag-autoQC03-plot
    1: runApp
reading index for 20231211_002_autoQC01.raw...
plotCycleTime