Listening on http://127.0.0.1:36939
Loading required package: shinydashboard

Attaching package: 'shinydashboard'

The following object is masked from 'package:graphics':

    box

Loading required package: readr
Loading required package: reshape2
Loading required package: lattice
Loading required package: rawDiag
Loading required package: rawrr
fn has changed to NA
fn has changed to NA
fn has changed to NA
fn has changed to NA
nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
input timeRange: 7776000 | timeMin: 2023-12-15 16:17:40.745677 | timeMax: 2024-01-05 16:17:40.746271 | timeDiff: 1814400.00059366
Loading required package: bfabricShiny

Attaching package: 'bfabricShiny'

The following object is masked from 'package:base':

    save

nFacets: 4
vals$rawrr: FALSE
vals$rawDiag: FALSE
input timeRange: 7776000 | timeMin: 2023-12-15 15:17:40.74568 | timeMax: 2024-01-05 15:17:40.74627 | timeDiff: 1814400.00059009
autoQC01 module APEX wide nrow: 256575
autoQC01 module APEX long nrow: 216
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
APEXAUC.lg2
Warning: Removed 4 rows containing missing values (`geom_point()`).
autoQC01 module APEX long nrow: 324
LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK
APEXAUC.lg2
Warning: Removed 10 rows containing missing values (`geom_point()`).
NA
nFacets: 3
reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt
Warning: One or more parsing issues, call `problems()` on your data frame for
details, e.g.:
  dat <- vroom(...)
  problems(dat)
nFacets: 1
vals$rawrr: FALSE
vals$rawDiag: FALSE
vals$rawrr: FALSE
vals$rawDiag: FALSE
nrow dataFiltered(): 54
Loading required package: ggh4x
Loading required package: ggplot2
using 'ggh4x' package ...
nrow dataFiltered(): 169
using 'ggh4x' package ...
`geom_line()`: Each group consists of only one observation.
ℹ Do you need to adjust the group aesthetic?
`geom_line()`: Each group consists of only one observation.
ℹ Do you need to adjust the group aesthetic?
`geom_line()`: Each group consists of only one observation.
ℹ Do you need to adjust the group aesthetic?
input timeRange: 7776000 | timeMin: 2023-12-15 15:17:40.746 | timeMax: 2024-01-05 15:17:40.746 | timeDiff: 1814400
nFacets: 3
nrow dataFiltered(): 169
using 'ggh4x' package ...
`geom_line()`: Each group consists of only one observation.
ℹ Do you need to adjust the group aesthetic?
`geom_line()`: Each group consists of only one observation.
ℹ Do you need to adjust the group aesthetic?
`geom_line()`: Each group consists of only one observation.
ℹ Do you need to adjust the group aesthetic?
nFacets: 1
nrow dataFiltered(): 54
using 'ggh4x' package ...
NA
p33642/Proteomics/LUMOS_2/analytic_20240104/20240104_C33642_014_autoQC03dda.raw
NA
nFacets: 4
nrow dataFiltered(): 260
using 'ggh4x' package ...
nFacets: 1
nrow dataFiltered(): 54
using 'ggh4x' package ...
p30725/Proteomics/LUMOS_1/analytic_20230214/20230214_C30725_007_autoQC4L.raw
p3000/Proteomics/LUMOS_1/pgehrig_20240104_autoQC/20240104_02_autoQC03dda.raw
NA


Execution halted