Listening on http://127.0.0.1:34707 Loading required package: shinydashboard Attaching package: 'shinydashboard' The following object is masked from 'package:graphics': box Loading required package: readr Loading required package: reshape2 Loading required package: lattice Loading required package: rawDiag Loading required package: rawrr fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2023-12-16 08:28:39.996129 | timeMax: 2024-01-06 08:28:39.996717 | timeDiff: 1814400.00058818 Loading required package: bfabricShiny Attaching package: 'bfabricShiny' The following object is masked from 'package:base': save nFacets: 4 nFacets: 1 reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt Warning: One or more parsing issues, call `problems()` on your data frame for details, e.g.: dat <- vroom(...) problems(dat) nFacets: 1 vals$rawrr: FALSE vals$rawDiag: FALSE vals$rawrr: FALSE vals$rawDiag: FALSE vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 108 Loading required package: ggh4x Loading required package: ggplot2 using 'ggh4x' package ... nrow dataFiltered(): 26 using 'ggh4x' package ... input timeRange: 7776000 | timeMin: 2023-12-16 07:28:39.99613 | timeMax: 2024-01-06 07:28:39.99672 | timeDiff: 1814400.00059009 nFacets: 1 nrow dataFiltered(): 26 using 'ggh4x' package ... nFacets: 1 nrow dataFiltered(): 108 using 'ggh4x' package ... input timeRange: 7776000 | timeMin: 2023-12-16 07:28:39.996 | timeMax: 2024-01-06 07:28:39.997 | timeDiff: 1814400.00099993 nFacets: 1 nrow dataFiltered(): 26 using 'ggh4x' package ... nFacets: 1 nrow dataFiltered(): 108 using 'ggh4x' package ... nFacets: 3 nrow dataFiltered(): 195 using 'ggh4x' package ... `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? nFacets: 1 nrow dataFiltered(): 54 using 'ggh4x' package ... fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2023-12-18 07:57:26.965918 | timeMax: 2024-01-08 07:57:26.966477 | timeDiff: 1814400.00055838 nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 160 using 'ggh4x' package ... input timeRange: 7776000 | timeMin: 2023-12-18 06:57:26.966 | timeMax: 2024-01-08 06:57:26.966 | timeDiff: 1814400 nFacets: 4 nrow dataFiltered(): 160 using 'ggh4x' package ... NA fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2023-12-18 09:33:38.65358 | timeMax: 2024-01-08 09:33:38.654149 | timeDiff: 1814400.00056839 nFacets: 4 nFacets: 1 reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt Warning: One or more parsing issues, call `problems()` on your data frame for details, e.g.: dat <- vroom(...) problems(dat) nFacets: 1 vals$rawrr: FALSE vals$rawDiag: FALSE vals$rawrr: FALSE vals$rawDiag: FALSE vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 90 using 'ggh4x' package ... nrow dataFiltered(): 26 using 'ggh4x' package ... input timeRange: 7776000 | timeMin: 2023-12-18 08:33:38.65358 | timeMax: 2024-01-08 08:33:38.65415 | timeDiff: 1814400.00056982 nFacets: 1 nrow dataFiltered(): 26 using 'ggh4x' package ... nFacets: 1 nrow dataFiltered(): 90 using 'ggh4x' package ... input timeRange: 7776000 | timeMin: 2023-12-18 08:33:38.654 | timeMax: 2024-01-08 08:33:38.654 | timeDiff: 1814400 nFacets: 1 nrow dataFiltered(): 26 using 'ggh4x' package ... nFacets: 1 nrow dataFiltered(): 90 using 'ggh4x' package ... nFacets: 4 nrow dataFiltered(): 312 using 'ggh4x' package ... nFacets: 1 nrow dataFiltered(): 126 using 'ggh4x' package ... NA NA fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2023-12-18 09:54:36.333787 | timeMax: 2024-01-08 09:54:36.334347 | timeDiff: 1814400.00056005 nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 160 using 'ggh4x' package ... input timeRange: 7776000 | timeMin: 2023-12-18 08:54:36.334 | timeMax: 2024-01-08 08:54:36.334 | timeDiff: 1814400 nFacets: 4 nrow dataFiltered(): 160 using 'ggh4x' package ... nFacets: 1 reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt Warning: One or more parsing issues, call `problems()` on your data frame for details, e.g.: dat <- vroom(...) problems(dat) nFacets: 1 vals$rawrr: FALSE vals$rawDiag: FALSE vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 90 using 'ggh4x' package ... nrow dataFiltered(): 26 using 'ggh4x' package ... nFacets: 1 nrow dataFiltered(): 52 using 'ggh4x' package ... nFacets: 1 nrow dataFiltered(): 90 using 'ggh4x' package ... NA fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2023-12-18 10:25:59.488789 | timeMax: 2024-01-08 10:25:59.489356 | timeDiff: 1814400.00056648 nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 160 using 'ggh4x' package ... input timeRange: 7776000 | timeMin: 2023-12-18 09:25:59.489 | timeMax: 2024-01-08 09:25:59.489 | timeDiff: 1814400 nFacets: 4 nrow dataFiltered(): 160 using 'ggh4x' package ... nFacets: 4 nrow dataFiltered(): 352 using 'ggh4x' package ... Warning: Removed 6 rows containing missing values (`geom_point()`). NA nFacets: 4 reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt Warning: One or more parsing issues, call `problems()` on your data frame for details, e.g.: dat <- vroom(...) problems(dat) nFacets: 1 vals$rawrr: FALSE vals$rawDiag: FALSE vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 126 using 'ggh4x' package ... nrow dataFiltered(): 312 using 'ggh4x' package ... NA nFacets: 1 nrow dataFiltered(): 26 using 'ggh4x' package ... nFacets: 1 nrow dataFiltered(): 0 p3000/Proteomics/TIMSTOFFLEX_1/antdit_20231219/zip/20231219_002_autoQC03dda_25ng_stdPASEF.d.zip input timeRange: 7776000 | timeMin: 2023-12-01 08:54:38.725 | timeMax: 2024-01-08 08:54:36.334 | timeDiff: 3283197.60900021 nFacets: 1 nrow dataFiltered(): 52 using 'ggh4x' package ... nFacets: 1 nrow dataFiltered(): 0 fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2023-12-18 10:57:24.914335 | timeMax: 2024-01-08 10:57:24.914903 | timeDiff: 1814400.00056767 nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 144 using 'ggh4x' package ... input timeRange: 7776000 | timeMin: 2023-12-18 09:57:24.914 | timeMax: 2024-01-08 09:57:24.915 | timeDiff: 1814400.00099993 nFacets: 4 nrow dataFiltered(): 144 using 'ggh4x' package ... fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2023-12-18 11:07:03.295948 | timeMax: 2024-01-08 11:07:03.296515 | timeDiff: 1814400.00056696 nFacets: 4 nFacets: 1 reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt Warning: One or more parsing issues, call `problems()` on your data frame for details, e.g.: dat <- vroom(...) problems(dat) nFacets: 1 vals$rawrr: FALSE vals$rawDiag: FALSE vals$rawrr: FALSE vals$rawDiag: FALSE vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 90 using 'ggh4x' package ... nrow dataFiltered(): 26 using 'ggh4x' package ... input timeRange: 7776000 | timeMin: 2023-12-18 10:07:03.29595 | timeMax: 2024-01-08 10:07:03.29651 | timeDiff: 1814400.00056005 nFacets: 1 nrow dataFiltered(): 26 using 'ggh4x' package ... nFacets: 1 nrow dataFiltered(): 90 using 'ggh4x' package ... input timeRange: 7776000 | timeMin: 2023-12-18 10:07:03.296 | timeMax: 2024-01-08 10:07:03.297 | timeDiff: 1814400.00099993 nFacets: 1 nrow dataFiltered(): 26 using 'ggh4x' package ... nFacets: 1 nrow dataFiltered(): 90 using 'ggh4x' package ... input timeRange: 7776000 | timeMin: 2023-12-18 10:07:03.296 | timeMax: 2024-01-08 10:07:06.3533 | timeDiff: 1814403.05730009 nFacets: 1 nrow dataFiltered(): 26 using 'ggh4x' package ... nFacets: 1 nrow dataFiltered(): 90 using 'ggh4x' package ... input timeRange: 7776000 | timeMin: 2023-12-18 10:07:03.296 | timeMax: 2024-01-08 10:07:06.353 | timeDiff: 1814403.05699992 nFacets: 1 nrow dataFiltered(): 26 using 'ggh4x' package ... nFacets: 1 nrow dataFiltered(): 90 using 'ggh4x' package ... nFacets: 1 nrow dataFiltered(): 26 using 'ggh4x' package ... nFacets: 1 nrow dataFiltered(): 0 nFacets: 4 nrow dataFiltered(): 0 input timeRange: 7776000 | timeMin: 2023-10-16 10:07:26.442 | timeMax: 2024-01-08 10:07:06.353 | timeDiff: 7257579.91100001 nFacets: 1 nrow dataFiltered(): 52 using 'ggh4x' package ... nFacets: 1 nrow dataFiltered(): 0 fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2023-12-18 11:41:24.799486 | timeMax: 2024-01-08 11:41:24.800171 | timeDiff: 1814400.00068474 nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 144 using 'ggh4x' package ... input timeRange: 7776000 | timeMin: 2023-12-18 10:41:24.799 | timeMax: 2024-01-08 10:41:24.8 | timeDiff: 1814400.00099993 nFacets: 4 nrow dataFiltered(): 144 using 'ggh4x' package ... fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2023-12-18 11:41:29.778393 | timeMax: 2024-01-08 11:41:29.778958 | timeDiff: 1814400.00056505 nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 144 using 'ggh4x' package ... input timeRange: 7776000 | timeMin: 2023-12-18 10:41:29.778 | timeMax: 2024-01-08 10:41:29.779 | timeDiff: 1814400.00099993 nFacets: 4 nrow dataFiltered(): 144 using 'ggh4x' package ... nFacets: 4 nrow dataFiltered(): 0 nFacets: 4 nrow dataFiltered(): 240 using 'ggh4x' package ... Warning: Removed 1 rows containing missing values (`geom_point()`). NA input timeRange: 7776000 | timeMin: 2023-10-19 10:41:31.138 | timeMax: 2024-01-08 10:41:29.779 | timeDiff: 6998398.64100003 nFacets: 4 nrow dataFiltered(): 0 nrow dataFiltered(): 240 using 'ggh4x' package ... Warning: Removed 2 rows containing missing values (`geom_point()`). nrow dataFiltered(): 240 using 'ggh4x' package ... Warning: Removed 1 rows containing missing values (`geom_point()`). reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt Warning: One or more parsing issues, call `problems()` on your data frame for details, e.g.: dat <- vroom(...) problems(dat) fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2023-12-18 12:05:32.212058 | timeMax: 2024-01-08 12:05:32.212977 | timeDiff: 1814400.00091982 nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 128 using 'ggh4x' package ... input timeRange: 7776000 | timeMin: 2023-12-18 11:05:32.212 | timeMax: 2024-01-08 11:05:32.213 | timeDiff: 1814400.00100017 nFacets: 4 nrow dataFiltered(): 128 using 'ggh4x' package ... nFacets: 4 nrow dataFiltered(): 336 using 'ggh4x' package ... Warning: Removed 6 rows containing missing values (`geom_point()`). NA nFacets: 4 reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt Warning: One or more parsing issues, call `problems()` on your data frame for details, e.g.: dat <- vroom(...) problems(dat) nFacets: 1 vals$rawrr: FALSE vals$rawDiag: FALSE vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 126 using 'ggh4x' package ... nrow dataFiltered(): 312 using 'ggh4x' package ... nFacets: 4 nrow dataFiltered(): 312 using 'ggh4x' package ... nFacets: 1 nrow dataFiltered(): 54 using 'ggh4x' package ... NA NA fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2023-12-18 12:07:58.259514 | timeMax: 2024-01-08 12:07:58.260228 | timeDiff: 1814400.00071359 nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE nFacets: 4 input timeRange: 7776000 | timeMin: 2023-12-18 11:07:58.26 | timeMax: 2024-01-08 11:07:58.26 | timeDiff: 1814400 nFacets: 4 nrow dataFiltered(): 352 using 'ggh4x' package ... Warning: Removed 1 rows containing missing values (`geom_point()`). NA nFacets: 4 nrow dataFiltered(): 240 using 'ggh4x' package ... Warning: Removed 1 rows containing missing values (`geom_point()`). nFacets: 4 reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt Warning: One or more parsing issues, call `problems()` on your data frame for details, e.g.: dat <- vroom(...) problems(dat) nFacets: 1 vals$rawrr: FALSE vals$rawDiag: FALSE vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 54 using 'ggh4x' package ... nrow dataFiltered(): 312 using 'ggh4x' package ... NA NA input timeRange: 7776000 | timeMin: 2023-12-18 11:08:34.116 | timeMax: 2024-01-08 11:07:58.26 | timeDiff: 1814364.14400005 nFacets: 4 nrow dataFiltered(): 312 using 'ggh4x' package ... nFacets: 1 nrow dataFiltered(): 54 using 'ggh4x' package ... nFacets: 3 nrow dataFiltered(): 169 using 'ggh4x' package ... `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? nFacets: 1 nrow dataFiltered(): 36 using 'ggh4x' package ... p33642/Proteomics/LUMOS_2/analytic_20240104/20240104_C33642_018_autoQC03dda.raw NA nrow dataFiltered(): 169 using 'ggh4x' package ... Warning: Using `size` aesthetic for lines was deprecated in ggplot2 3.4.0. ℹ Please use `linewidth` instead. `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? nrow dataFiltered(): 36 using 'ggh4x' package ... input timeRange: 7776000 | timeMin: 2023-10-10 11:09:00.29057 | timeMax: 2024-01-08 11:07:58.26 | timeDiff: 7775937.96942997 nFacets: 3 nrow dataFiltered(): 871 using 'ggh4x' package ... `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? nFacets: 1 nrow dataFiltered(): 270 using 'ggh4x' package ... input timeRange: 7776000 | timeMin: 2023-10-10 14:10:07.432823 | timeMax: 2024-01-08 11:07:58.26 | timeDiff: 7772270.82717705 nFacets: 3 nrow dataFiltered(): 871 using 'ggh4x' package ... `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? nrow dataFiltered(): 270 using 'ggh4x' package ... nFacets: 1 input timeRange: 7776000 | timeMin: 2023-10-10 12:10:07.433 | timeMax: 2024-01-08 11:07:58.26 | timeDiff: 7772270.8269999 nFacets: 4 nrow dataFiltered(): 1612 using 'ggh4x' package ... nrow dataFiltered(): 216 using 'ggh4x' package ... nFacets: 1 fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2023-12-18 12:26:18.959667 | timeMax: 2024-01-08 12:26:18.960353 | timeDiff: 1814400.00068617 nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 128 using 'ggh4x' package ... input timeRange: 7776000 | timeMin: 2023-12-18 11:26:18.96 | timeMax: 2024-01-08 11:26:18.96 | timeDiff: 1814400 nFacets: 4 nrow dataFiltered(): 128 using 'ggh4x' package ... fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2023-12-18 12:34:05.152454 | timeMax: 2024-01-08 12:34:05.153047 | timeDiff: 1814400.00059271 nFacets: 4 reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt Warning: One or more parsing issues, call `problems()` on your data frame for details, e.g.: dat <- vroom(...) problems(dat) vals$rawrr: FALSE vals$rawDiag: FALSE input timeRange: 7776000 | timeMin: 2023-12-18 11:34:05.15245 | timeMax: 2024-01-08 11:34:05.15305 | timeDiff: 1814400.0006001 nFacets: 1 nFacets: 1 vals$rawrr: FALSE vals$rawDiag: FALSE vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 90 using 'ggh4x' package ... nrow dataFiltered(): 26 using 'ggh4x' package ... input timeRange: 7776000 | timeMin: 2023-12-18 11:34:05.152 | timeMax: 2024-01-08 11:34:05.153 | timeDiff: 1814400.00100017 nFacets: 1 nrow dataFiltered(): 26 using 'ggh4x' package ... nFacets: 1 nrow dataFiltered(): 90 using 'ggh4x' package ... nFacets: 4 nrow dataFiltered(): 128 using 'ggh4x' package ... NA p3000/Proteomics/EXPLORIS_2/analytic_20240104/20240104_002_autoQC01.raw NA nFacets: 4 nrow dataFiltered(): 336 using 'ggh4x' package ... nFacets: 4 nrow dataFiltered(): 352 using 'ggh4x' package ... Warning: Removed 1 rows containing missing values (`geom_point()`). nFacets: 4 nrow dataFiltered(): 240 using 'ggh4x' package ... Warning: Removed 1 rows containing missing values (`geom_point()`). nFacets: 4 nrow dataFiltered(): 0 nFacets: 0 nrow dataFiltered(): 0 nFacets: 1 nrow dataFiltered(): 126 using 'ggh4x' package ... Warning: Error in graphics::plot.new: figure margins too large 104: graphics::plot.new 101: startPNG 100: plotPNG 99: resizeSavedPlot 97: func 95: f 94: Reduce 85: do 84: hybrid_chain 83: renderFunc 82: output$autoQC03-DDA-plot 1: runApp nFacets: 1 Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$autoQC03-DDA-plot 1: runApp nFacets: 1 nrow dataFiltered(): 90 using 'ggh4x' package ... nrow dataFiltered(): 26 using 'ggh4x' package ... NA fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2023-12-18 12:37:42.3827 | timeMax: 2024-01-08 12:37:42.383295 | timeDiff: 1814400.00059485 nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2023-12-18 12:37:46.004987 | timeMax: 2024-01-08 12:37:46.005723 | timeDiff: 1814400.00073552 nFacets: 4 input timeRange: 7776000 | timeMin: 2023-12-18 11:37:42.383 | timeMax: 2024-01-08 11:37:42.383 | timeDiff: 1814400 nFacets: 4 nFacets: 1 reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt Warning: One or more parsing issues, call `problems()` on your data frame for details, e.g.: dat <- vroom(...) problems(dat) nFacets: 1 vals$rawrr: FALSE vals$rawDiag: FALSE vals$rawrr: FALSE vals$rawDiag: FALSE vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 90 using 'ggh4x' package ... nrow dataFiltered(): 26 using 'ggh4x' package ... input timeRange: 7776000 | timeMin: 2023-12-18 11:37:46.00499 | timeMax: 2024-01-08 11:37:46.00572 | timeDiff: 1814400.0007298 nFacets: 1 nrow dataFiltered(): 26 using 'ggh4x' package ... nFacets: 1 nrow dataFiltered(): 90 using 'ggh4x' package ... input timeRange: 7776000 | timeMin: 2023-12-18 11:37:46.005 | timeMax: 2024-01-08 11:37:46.006 | timeDiff: 1814400.00099993 nFacets: 1 nrow dataFiltered(): 26 using 'ggh4x' package ... nFacets: 1 nrow dataFiltered(): 90 using 'ggh4x' package ... nrow dataFiltered(): 26 using 'ggh4x' package ... nrow dataFiltered(): 90 using 'ggh4x' package ... nrow dataFiltered(): 26 using 'ggh4x' package ... nrow dataFiltered(): 90 using 'ggh4x' package ... fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2023-12-18 12:54:10.027991 | timeMax: 2024-01-08 12:54:10.028566 | timeDiff: 1814400.00057507 nFacets: 4 nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 352 using 'ggh4x' package ... Warning: Removed 1 rows containing missing values (`geom_point()`). input timeRange: 7776000 | timeMin: 2023-12-18 11:54:10.028 | timeMax: 2024-01-08 11:54:10.029 | timeDiff: 1814400.00099993 nFacets: 4 nrow dataFiltered(): 352 using 'ggh4x' package ... Warning: Removed 1 rows containing missing values (`geom_point()`). NA fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2023-12-18 14:15:21.424302 | timeMax: 2024-01-08 14:15:21.42496 | timeDiff: 1814400.00065827 nFacets: 4 nFacets: 1 reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt Warning: One or more parsing issues, call `problems()` on your data frame for details, e.g.: dat <- vroom(...) problems(dat) nFacets: 1 vals$rawrr: FALSE vals$rawDiag: FALSE vals$rawrr: FALSE vals$rawDiag: FALSE vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 90 using 'ggh4x' package ... nrow dataFiltered(): 13 using 'ggh4x' package ... `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? input timeRange: 7776000 | timeMin: 2023-12-18 13:15:21.4243 | timeMax: 2024-01-08 13:15:21.42496 | timeDiff: 1814400.00065994 nFacets: 1 nrow dataFiltered(): 13 using 'ggh4x' package ... `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? nFacets: 1 nrow dataFiltered(): 90 using 'ggh4x' package ... input timeRange: 7776000 | timeMin: 2023-12-18 13:15:21.424 | timeMax: 2024-01-08 13:15:21.425 | timeDiff: 1814400.00099993 nFacets: 1 nrow dataFiltered(): 13 using 'ggh4x' package ... `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? nFacets: 1 nrow dataFiltered(): 90 using 'ggh4x' package ... input timeRange: 7776000 | timeMin: 2023-12-06 13:15:24.368 | timeMax: 2024-01-08 13:15:21.425 | timeDiff: 2851197.05699992 nFacets: 1 nrow dataFiltered(): 39 using 'ggh4x' package ... nFacets: 1 nrow dataFiltered(): 180 using 'ggh4x' package ... NA input timeRange: 7776000 | timeMin: 2023-11-02 13:15:26.963 | timeMax: 2024-01-08 13:15:21.425 | timeDiff: 5788794.46199989 nFacets: 1 nrow dataFiltered(): 221 using 'ggh4x' package ... nFacets: 1 nrow dataFiltered(): 234 using 'ggh4x' package ... NA p3000/Proteomics/EXPLORIS_2/analytic_20240104/20240104_004_autoQC03dia.raw fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2023-12-18 14:26:59.337945 | timeMax: 2024-01-08 14:26:59.338529 | timeDiff: 1814400.00058389 nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 128 using 'ggh4x' package ... input timeRange: 7776000 | timeMin: 2023-12-18 13:26:59.338 | timeMax: 2024-01-08 13:26:59.339 | timeDiff: 1814400.00099993 nFacets: 4 nrow dataFiltered(): 128 using 'ggh4x' package ... nFacets: 4 nrow dataFiltered(): 240 using 'ggh4x' package ... Warning: Removed 1 rows containing missing values (`geom_point()`). nFacets: 4 nrow dataFiltered(): 352 using 'ggh4x' package ... Warning: Removed 1 rows containing missing values (`geom_point()`). NA nFacets: 3 reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt Warning: One or more parsing issues, call `problems()` on your data frame for details, e.g.: dat <- vroom(...) problems(dat) nFacets: 1 vals$rawrr: FALSE vals$rawDiag: FALSE vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 36 using 'ggh4x' package ... nrow dataFiltered(): 169 using 'ggh4x' package ... `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? p33642/Proteomics/LUMOS_2/analytic_20240104/20240104_C33642_014_autoQC03dda.raw NA p33642/Proteomics/LUMOS_2/analytic_20240104/20240104_C33642_018_autoQC03dda.raw fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2023-12-18 14:27:38.673269 | timeMax: 2024-01-08 14:27:38.673854 | timeDiff: 1814400.00058508 nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 352 using 'ggh4x' package ... Warning: Removed 1 rows containing missing values (`geom_point()`). input timeRange: 7776000 | timeMin: 2023-12-18 13:27:38.673 | timeMax: 2024-01-08 13:27:38.674 | timeDiff: 1814400.00099993 nFacets: 4 nrow dataFiltered(): 352 using 'ggh4x' package ... Warning: Removed 1 rows containing missing values (`geom_point()`). p33212/Proteomics/LUMOS_2/cfortes_20240108/20240108_001_autoQC01.raw NA p33212/Proteomics/LUMOS_2/cfortes_20240108/20240108_001_autoQC01.raw NA p33212/Proteomics/LUMOS_2/cfortes_20240108/20240108_001_autoQC01.raw plotClick: fn has changed to /srv/www/htdocs//p33212/Proteomics/LUMOS_2/cfortes_20240108/20240108_001_autoQC01.raw NA nFacets: 3 reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt Warning: One or more parsing issues, call `problems()` on your data frame for details, e.g.: dat <- vroom(...) problems(dat) nFacets: 1 vals$rawrr: FALSE vals$rawDiag: FALSE vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 36 using 'ggh4x' package ... nrow dataFiltered(): 169 using 'ggh4x' package ... `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? p33642/Proteomics/LUMOS_2/analytic_20240104/20240104_C33642_018_autoQC03dda.raw NA NA p33212/Proteomics/LUMOS_2/cfortes_20240104/20240104_005_autoQC03dia.raw NA p33212/Proteomics/LUMOS_2/cfortes_20240104/20240104_005_autoQC03dia.raw NA fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2023-12-18 14:44:48.822674 | timeMax: 2024-01-08 14:44:48.823257 | timeDiff: 1814400.00058317 nFacets: 4 nFacets: 1 reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt Warning: One or more parsing issues, call `problems()` on your data frame for details, e.g.: dat <- vroom(...) problems(dat) nFacets: 1 vals$rawrr: FALSE vals$rawDiag: FALSE vals$rawrr: FALSE vals$rawDiag: FALSE vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 90 using 'ggh4x' package ... nrow dataFiltered(): 13 using 'ggh4x' package ... `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? input timeRange: 7776000 | timeMin: 2023-12-18 13:44:48.82267 | timeMax: 2024-01-08 13:44:48.82326 | timeDiff: 1814400.00059009 nFacets: 1 nrow dataFiltered(): 13 using 'ggh4x' package ... `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? nFacets: 1 nrow dataFiltered(): 90 using 'ggh4x' package ... input timeRange: 7776000 | timeMin: 2023-12-18 13:44:48.823 | timeMax: 2024-01-08 13:44:48.823 | timeDiff: 1814400 nFacets: 1 nrow dataFiltered(): 13 using 'ggh4x' package ... `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? nFacets: 1 nrow dataFiltered(): 90 using 'ggh4x' package ... nFacets: 3 nrow dataFiltered(): 169 using 'ggh4x' package ... `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? nFacets: 1 nrow dataFiltered(): 36 using 'ggh4x' package ... p33212/Proteomics/LUMOS_2/cfortes_20240104/20240104_005_autoQC03dia.raw NA p33212/Proteomics/LUMOS_2/cfortes_20240104/20240104_005_autoQC03dia.raw fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2023-12-18 14:51:35.414546 | timeMax: 2024-01-08 14:51:35.415136 | timeDiff: 1814400.00059056 nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 128 using 'ggh4x' package ... input timeRange: 7776000 | timeMin: 2023-12-18 13:51:35.415 | timeMax: 2024-01-08 13:51:35.415 | timeDiff: 1814400 nFacets: 4 nrow dataFiltered(): 128 using 'ggh4x' package ... NA nFacets: 4 nrow dataFiltered(): 352 using 'ggh4x' package ... Warning: Removed 1 rows containing missing values (`geom_point()`). nFacets: 3 reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt Warning: One or more parsing issues, call `problems()` on your data frame for details, e.g.: dat <- vroom(...) problems(dat) nFacets: 1 vals$rawrr: FALSE vals$rawDiag: FALSE vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 36 using 'ggh4x' package ... nrow dataFiltered(): 169 using 'ggh4x' package ... `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? NA p33642/Proteomics/LUMOS_2/analytic_20240104/20240104_C33642_018_autoQC03dda.raw plotClick: fn has changed to /srv/www/htdocs//p33642/Proteomics/LUMOS_2/analytic_20240104/20240104_C33642_018_autoQC03dda.raw NA p33642/Proteomics/LUMOS_2/analytic_20240104/20240104_C33642_018_autoQC03dda.raw p33642/Proteomics/LUMOS_2/analytic_20240104/20240104_C33642_014_autoQC03dda.raw p33642/Proteomics/LUMOS_2/analytic_20240104/20240104_C33642_018_autoQC03dda.raw plotClick: NA NA p33642/Proteomics/LUMOS_2/analytic_20240104/20240104_C33642_018_autoQC03dda.raw plotClick: p33212/Proteomics/LUMOS_2/cfortes_20240104/20240104_004_autoQC03dda.raw plotClick: fn has changed to /srv/www/htdocs//p33212/Proteomics/LUMOS_2/cfortes_20240104/20240104_004_autoQC03dda.raw NA fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2023-12-18 14:56:50.887624 | timeMax: 2024-01-08 14:56:50.888288 | timeDiff: 1814400.000664 nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 352 using 'ggh4x' package ... Warning: Removed 1 rows containing missing values (`geom_point()`). input timeRange: 7776000 | timeMin: 2023-12-18 13:56:50.888 | timeMax: 2024-01-08 13:56:50.888 | timeDiff: 1814400 nFacets: 4 nrow dataFiltered(): 352 using 'ggh4x' package ... Warning: Removed 1 rows containing missing values (`geom_point()`). p33212/Proteomics/LUMOS_2/cfortes_20240108/20240108_001_autoQC01.raw NA nFacets: 3 reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt Warning: One or more parsing issues, call `problems()` on your data frame for details, e.g.: dat <- vroom(...) problems(dat) nFacets: 1 vals$rawrr: FALSE vals$rawDiag: FALSE vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 36 using 'ggh4x' package ... nrow dataFiltered(): 169 using 'ggh4x' package ... `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? NA p33642/Proteomics/LUMOS_2/analytic_20240104/20240104_C33642_018_autoQC03dda.raw plotClick: fn has changed to /srv/www/htdocs//p33642/Proteomics/LUMOS_2/analytic_20240104/20240104_C33642_018_autoQC03dda.raw NA p33642/Proteomics/LUMOS_2/analytic_20240104/20240104_C33642_018_autoQC03dda.raw plotClick: p33642/Proteomics/LUMOS_2/analytic_20240104/20240104_C33642_014_autoQC03dda.raw p33642/Proteomics/LUMOS_2/analytic_20240104/20240104_C33642_018_autoQC03dda.raw plotClick: input timeRange: 7776000 | timeMin: 2024-01-02 13:57:01.066 | timeMax: 2024-01-08 13:56:50.888 | timeDiff: 518389.822000027 nFacets: 2 nrow dataFiltered(): 104 using 'ggh4x' package ... nFacets: 1 nrow dataFiltered(): 36 using 'ggh4x' package ... plotClick: autoQC01 module APEX wide nrow: 256663 autoQC01 module APEX long nrow: 156 LGGNEQVTR, TPVISGGPYEYR, LFLQFGAQGSPFLK APEXAUC.lg2 Warning: Removed 8 rows containing missing values (`geom_point()`). Warning: Removed 2 rows containing missing values (`geom_line()`). p33212/Proteomics/LUMOS_2/cfortes_20240108/20240108_001_autoQC01.raw fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2023-12-18 14:58:19.702772 | timeMax: 2024-01-08 14:58:19.703375 | timeDiff: 1814400.00060272 nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 352 using 'ggh4x' package ... Warning: Removed 1 rows containing missing values (`geom_point()`). input timeRange: 7776000 | timeMin: 2023-12-18 13:58:19.703 | timeMax: 2024-01-08 13:58:19.703 | timeDiff: 1814400 nFacets: 4 nrow dataFiltered(): 352 using 'ggh4x' package ... Warning: Removed 1 rows containing missing values (`geom_point()`). NA nFacets: 3 reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt Warning: One or more parsing issues, call `problems()` on your data frame for details, e.g.: dat <- vroom(...) problems(dat) nFacets: 1 vals$rawrr: FALSE vals$rawDiag: FALSE vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 36 using 'ggh4x' package ... nrow dataFiltered(): 169 using 'ggh4x' package ... `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? NA fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2023-12-18 15:02:32.055543 | timeMax: 2024-01-08 15:02:32.056127 | timeDiff: 1814400.00058341 nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 352 using 'ggh4x' package ... Warning: Removed 1 rows containing missing values (`geom_point()`). input timeRange: 7776000 | timeMin: 2023-12-18 14:02:32.056 | timeMax: 2024-01-08 14:02:32.056 | timeDiff: 1814400 nFacets: 4 nrow dataFiltered(): 352 using 'ggh4x' package ... Warning: Removed 1 rows containing missing values (`geom_point()`). nFacets: 3 reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt Warning: One or more parsing issues, call `problems()` on your data frame for details, e.g.: dat <- vroom(...) problems(dat) nFacets: 1 vals$rawrr: FALSE vals$rawDiag: FALSE vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 36 using 'ggh4x' package ... nrow dataFiltered(): 169 using 'ggh4x' package ... `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? nFacets: 1 nrow dataFiltered(): 13 using 'ggh4x' package ... `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? nFacets: 1 nrow dataFiltered(): 90 using 'ggh4x' package ... p3000/Proteomics/EXPLORIS_2/analytic_20240104/20240104_003_autoQC03dda.raw nFacets: 1 nrow dataFiltered(): 52 using 'ggh4x' package ... nFacets: 1 nrow dataFiltered(): 90 using 'ggh4x' package ... NA p3000/Proteomics/EXPLORIS_1/spfammatter_20240103/20240103_003_autoQC03dda.raw plotClick: fn has changed to /srv/www/htdocs//p3000/Proteomics/EXPLORIS_1/spfammatter_20240103/20240103_003_autoQC03dda.raw NA NA plotClick: fn has changed to /srv/www/htdocs//NA nFacets: 4 nrow dataFiltered(): 336 using 'ggh4x' package ... p33795/Proteomics/EXPLORIS_1/analytic_20240103/20240103_C33795_034_autoQC01.raw fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2023-12-18 15:03:36.159452 | timeMax: 2024-01-08 15:03:36.160035 | timeDiff: 1814400.00058246 nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 128 using 'ggh4x' package ... input timeRange: 7776000 | timeMin: 2023-12-18 14:03:36.159 | timeMax: 2024-01-08 14:03:36.16 | timeDiff: 1814400.00100017 nFacets: 4 nrow dataFiltered(): 128 using 'ggh4x' package ... nFacets: 4 nrow dataFiltered(): 352 using 'ggh4x' package ... Warning: Removed 1 rows containing missing values (`geom_point()`). nFacets: 3 reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt Warning: One or more parsing issues, call `problems()` on your data frame for details, e.g.: dat <- vroom(...) problems(dat) nFacets: 1 vals$rawrr: FALSE vals$rawDiag: FALSE vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 36 using 'ggh4x' package ... nrow dataFiltered(): 169 using 'ggh4x' package ... `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2023-12-18 15:05:39.872032 | timeMax: 2024-01-08 15:05:39.872747 | timeDiff: 1814400.00071549 nFacets: 4 nFacets: 1 reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt Warning: One or more parsing issues, call `problems()` on your data frame for details, e.g.: dat <- vroom(...) problems(dat) nFacets: 1 vals$rawrr: FALSE vals$rawDiag: FALSE vals$rawrr: FALSE vals$rawDiag: FALSE vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 90 using 'ggh4x' package ... nrow dataFiltered(): 13 using 'ggh4x' package ... `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? input timeRange: 7776000 | timeMin: 2023-12-18 14:05:39.87203 | timeMax: 2024-01-08 14:05:39.87275 | timeDiff: 1814400.00072002 nFacets: 1 nrow dataFiltered(): 13 using 'ggh4x' package ... `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? nFacets: 1 nrow dataFiltered(): 90 using 'ggh4x' package ... input timeRange: 7776000 | timeMin: 2023-12-18 14:05:39.872 | timeMax: 2024-01-08 14:05:39.873 | timeDiff: 1814400.00099993 nFacets: 1 nrow dataFiltered(): 13 using 'ggh4x' package ... `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? nFacets: 1 nrow dataFiltered(): 90 using 'ggh4x' package ... nFacets: 3 nrow dataFiltered(): 169 using 'ggh4x' package ... `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? nFacets: 1 nrow dataFiltered(): 36 using 'ggh4x' package ... NA p33642/Proteomics/LUMOS_2/analytic_20240104/20240104_C33642_018_autoQC03dda.raw fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2023-12-18 15:09:02.258883 | timeMax: 2024-01-08 15:09:02.259468 | timeDiff: 1814400.00058508 nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 352 using 'ggh4x' package ... Warning: Removed 1 rows containing missing values (`geom_point()`). input timeRange: 7776000 | timeMin: 2023-12-18 14:09:02.259 | timeMax: 2024-01-08 14:09:02.259 | timeDiff: 1814400 nFacets: 4 nrow dataFiltered(): 352 using 'ggh4x' package ... Warning: Removed 1 rows containing missing values (`geom_point()`). nFacets: 3 reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt Warning: One or more parsing issues, call `problems()` on your data frame for details, e.g.: dat <- vroom(...) problems(dat) nFacets: 1 vals$rawrr: FALSE vals$rawDiag: FALSE vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 36 using 'ggh4x' package ... nrow dataFiltered(): 169 using 'ggh4x' package ... `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? NA fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2023-12-18 15:09:50.021994 | timeMax: 2024-01-08 15:09:50.02257 | timeDiff: 1814400.0005753 nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE input timeRange: 7776000 | timeMin: 2023-12-18 14:09:50.022 | timeMax: 2024-01-08 14:09:50.023 | timeDiff: 1814400.00099993 nFacets: 4 nrow dataFiltered(): 352 using 'ggh4x' package ... Warning: Removed 1 rows containing missing values (`geom_point()`). fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2023-12-18 15:10:31.529428 | timeMax: 2024-01-08 15:10:31.530019 | timeDiff: 1814400.00059128 nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 352 using 'ggh4x' package ... Warning: Removed 1 rows containing missing values (`geom_point()`). input timeRange: 7776000 | timeMin: 2023-12-18 14:10:31.529 | timeMax: 2024-01-08 14:10:31.53 | timeDiff: 1814400.00099993 nFacets: 4 nrow dataFiltered(): 352 using 'ggh4x' package ... Warning: Removed 1 rows containing missing values (`geom_point()`). nFacets: 3 reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt Warning: One or more parsing issues, call `problems()` on your data frame for details, e.g.: dat <- vroom(...) problems(dat) nFacets: 1 vals$rawrr: FALSE vals$rawDiag: FALSE vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 36 using 'ggh4x' package ... nrow dataFiltered(): 169 using 'ggh4x' package ... `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? NA NA p33212/Proteomics/LUMOS_2/cfortes_20240104/20240104_005_autoQC03dia.raw NA plotClick: fn has changed to /srv/www/htdocs//p33212/Proteomics/LUMOS_2/cfortes_20240104/20240104_005_autoQC03dia.raw p33212/Proteomics/LUMOS_2/cfortes_20240104/20240104_005_autoQC03dia.raw plotClick: NA plotClick: fn has changed to /srv/www/htdocs//NA NA p33212/Proteomics/LUMOS_2/cfortes_20240104/20240104_005_autoQC03dia.raw plotClick: fn has changed to /srv/www/htdocs//p33212/Proteomics/LUMOS_2/cfortes_20240104/20240104_005_autoQC03dia.raw plotClick: plotClick: NA plotClick: fn has changed to /srv/www/htdocs//p33642/Proteomics/LUMOS_2/analytic_20240104/20240104_C33642_018_autoQC03dda.raw plotClick: p33642/Proteomics/LUMOS_2/analytic_20240104/20240104_C33642_018_autoQC03dda.raw p33642/Proteomics/LUMOS_2/analytic_20240104/20240104_C33642_018_autoQC03dda.raw plotClick: NA p33642/Proteomics/LUMOS_2/analytic_20240104/20240104_C33642_018_autoQC03dda.raw plotClick: NA fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2023-12-18 15:13:42.72644 | timeMax: 2024-01-08 15:13:42.727036 | timeDiff: 1814400.00059557 nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 352 using 'ggh4x' package ... Warning: Removed 1 rows containing missing values (`geom_point()`). input timeRange: 7776000 | timeMin: 2023-12-18 14:13:42.726 | timeMax: 2024-01-08 14:13:42.727 | timeDiff: 1814400.00099993 nFacets: 4 nrow dataFiltered(): 352 using 'ggh4x' package ... Warning: Removed 1 rows containing missing values (`geom_point()`). nFacets: 3 reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt Warning: One or more parsing issues, call `problems()` on your data frame for details, e.g.: dat <- vroom(...) problems(dat) nFacets: 1 vals$rawrr: FALSE vals$rawDiag: FALSE vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 36 using 'ggh4x' package ... nrow dataFiltered(): 169 using 'ggh4x' package ... `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? NA p33642/Proteomics/LUMOS_2/analytic_20240104/20240104_C33642_018_autoQC03dda.raw plotClick: fn has changed to /srv/www/htdocs//p33642/Proteomics/LUMOS_2/analytic_20240104/20240104_C33642_018_autoQC03dda.raw NA p33642/Proteomics/LUMOS_2/analytic_20240104/20240104_C33642_018_autoQC03dda.raw plotClick: plotClick: p33642/Proteomics/LUMOS_2/analytic_20240104/20240104_C33642_018_autoQC03dda.raw p33642/Proteomics/LUMOS_2/analytic_20240104/20240104_C33642_018_autoQC03dda.raw plotClick: fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2023-12-18 15:14:47.378396 | timeMax: 2024-01-08 15:14:47.378983 | timeDiff: 1814400.00058746 nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 352 using 'ggh4x' package ... Warning: Removed 1 rows containing missing values (`geom_point()`). input timeRange: 7776000 | timeMin: 2023-12-18 14:14:47.378 | timeMax: 2024-01-08 14:14:47.379 | timeDiff: 1814400.00099993 nFacets: 4 nrow dataFiltered(): 352 using 'ggh4x' package ... Warning: Removed 1 rows containing missing values (`geom_point()`). NA nFacets: 3 reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt Warning: One or more parsing issues, call `problems()` on your data frame for details, e.g.: dat <- vroom(...) problems(dat) nFacets: 1 vals$rawrr: FALSE vals$rawDiag: FALSE vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 36 using 'ggh4x' package ... nrow dataFiltered(): 169 using 'ggh4x' package ... `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? p33212/Proteomics/LUMOS_2/leonardoschwarz_20231116/20231116_002_S580219_K562_incl_iRT_autoQC03dia.raw p33212/Proteomics/LUMOS_2/cfortes_20240104/20240104_005_autoQC03dia.raw p33212/Proteomics/LUMOS_2/cfortes_20240103/20240103_004_autoQC03dia.raw NA p33642/Proteomics/LUMOS_2/analytic_20240104/20240104_C33642_018_autoQC03dda.raw plotClick: fn has changed to /srv/www/htdocs//p33642/Proteomics/LUMOS_2/analytic_20240104/20240104_C33642_018_autoQC03dda.raw NA p33642/Proteomics/LUMOS_2/analytic_20240104/20240104_C33642_014_autoQC03dda.raw p33642/Proteomics/LUMOS_2/analytic_20240104/20240104_C33642_018_autoQC03dda.raw p33642/Proteomics/LUMOS_2/analytic_20240104/20240104_C33642_018_autoQC03dda.raw fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2023-12-18 15:19:59.210267 | timeMax: 2024-01-08 15:19:59.210864 | timeDiff: 1814400.00059724 nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 352 using 'ggh4x' package ... Warning: Removed 1 rows containing missing values (`geom_point()`). input timeRange: 7776000 | timeMin: 2023-12-18 14:19:59.21 | timeMax: 2024-01-08 14:19:59.211 | timeDiff: 1814400.00099993 nFacets: 4 nrow dataFiltered(): 352 using 'ggh4x' package ... Warning: Removed 1 rows containing missing values (`geom_point()`). nFacets: 3 reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt Warning: One or more parsing issues, call `problems()` on your data frame for details, e.g.: dat <- vroom(...) problems(dat) nFacets: 1 vals$rawrr: FALSE vals$rawDiag: FALSE vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 36 using 'ggh4x' package ... nrow dataFiltered(): 169 using 'ggh4x' package ... `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2023-12-18 15:21:38.294097 | timeMax: 2024-01-08 15:21:38.294676 | timeDiff: 1814400.00057888 nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 352 using 'ggh4x' package ... Warning: Removed 1 rows containing missing values (`geom_point()`). input timeRange: 7776000 | timeMin: 2023-12-18 14:21:38.294 | timeMax: 2024-01-08 14:21:38.295 | timeDiff: 1814400.00100017 nFacets: 4 nrow dataFiltered(): 352 using 'ggh4x' package ... Warning: Removed 1 rows containing missing values (`geom_point()`). nFacets: 3 reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt Warning: One or more parsing issues, call `problems()` on your data frame for details, e.g.: dat <- vroom(...) problems(dat) nFacets: 1 vals$rawrr: FALSE vals$rawDiag: FALSE vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 36 using 'ggh4x' package ... nrow dataFiltered(): 169 using 'ggh4x' package ... `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2023-12-18 15:23:20.249777 | timeMax: 2024-01-08 15:23:20.250361 | timeDiff: 1814400.00058413 nFacets: 4 nFacets: 3 reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt Warning: One or more parsing issues, call `problems()` on your data frame for details, e.g.: dat <- vroom(...) problems(dat) nFacets: 1 vals$rawrr: FALSE vals$rawDiag: FALSE vals$rawrr: FALSE vals$rawDiag: FALSE vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 36 using 'ggh4x' package ... nrow dataFiltered(): 169 using 'ggh4x' package ... `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? input timeRange: 7776000 | timeMin: 2023-12-18 14:23:20.24978 | timeMax: 2024-01-08 14:23:20.25036 | timeDiff: 1814400.00058007 nFacets: 3 nrow dataFiltered(): 169 using 'ggh4x' package ... `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? nFacets: 1 nrow dataFiltered(): 36 using 'ggh4x' package ... input timeRange: 7776000 | timeMin: 2023-12-18 14:23:20.25 | timeMax: 2024-01-08 14:23:20.25 | timeDiff: 1814400 nFacets: 3 nrow dataFiltered(): 169 using 'ggh4x' package ... `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? nFacets: 1 nrow dataFiltered(): 36 using 'ggh4x' package ... fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2023-12-18 15:23:41.00049 | timeMax: 2024-01-08 15:23:41.001076 | timeDiff: 1814400.00058627 nFacets: 4 nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE input timeRange: 7776000 | timeMin: 2023-12-18 14:23:41 | timeMax: 2024-01-08 14:23:41.001 | timeDiff: 1814400.00099993 nFacets: 4 nFacets: 0 reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt Warning: One or more parsing issues, call `problems()` on your data frame for details, e.g.: dat <- vroom(...) problems(dat) nFacets: 1 vals$rawrr: FALSE vals$rawDiag: FALSE vals$rawrr: FALSE vals$rawDiag: FALSE Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$autoQC03-DDA-plot 1: runApp nrow dataFiltered(): 108 using 'ggh4x' package ... Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$autoQC03-DDA-plot 1: runApp fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2023-12-18 15:29:27.846878 | timeMax: 2024-01-08 15:29:27.847467 | timeDiff: 1814400.00058913 nFacets: 4 nFacets: 1 reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt Warning: One or more parsing issues, call `problems()` on your data frame for details, e.g.: dat <- vroom(...) problems(dat) nFacets: 1 vals$rawrr: FALSE vals$rawDiag: FALSE vals$rawrr: FALSE vals$rawDiag: FALSE vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 90 using 'ggh4x' package ... nrow dataFiltered(): 13 using 'ggh4x' package ... `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? input timeRange: 7776000 | timeMin: 2023-12-18 14:29:27.84688 | timeMax: 2024-01-08 14:29:27.84747 | timeDiff: 1814400.00059009 nFacets: 1 nrow dataFiltered(): 13 using 'ggh4x' package ... `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? nFacets: 1 nrow dataFiltered(): 90 using 'ggh4x' package ... input timeRange: 7776000 | timeMin: 2023-12-18 14:29:27.847 | timeMax: 2024-01-08 14:29:27.847 | timeDiff: 1814400 nFacets: 1 nrow dataFiltered(): 13 using 'ggh4x' package ... `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? nFacets: 1 nrow dataFiltered(): 90 using 'ggh4x' package ... p3000/Proteomics/EXPLORIS_2/analytic_20240104/20240104_009_autoQC03dia.raw nFacets: 3 nrow dataFiltered(): 169 using 'ggh4x' package ... `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? nFacets: 1 nrow dataFiltered(): 36 using 'ggh4x' package ... NA p33212/Proteomics/LUMOS_2/cfortes_20240104/20240104_005_autoQC03dia.raw plotClick: fn has changed to /srv/www/htdocs//p33212/Proteomics/LUMOS_2/cfortes_20240104/20240104_005_autoQC03dia.raw input timeRange: 7776000 | timeMin: 2023-12-01 14:29:30.374 | timeMax: 2024-01-08 14:29:27.847 | timeDiff: 3283197.47299981 nFacets: 3 nrow dataFiltered(): 325 using 'ggh4x' package ... `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? nFacets: 1 nrow dataFiltered(): 126 using 'ggh4x' package ... NA p33212/Proteomics/LUMOS_2/cfortes_20240104/20240104_005_autoQC03dia.raw plotClick: NA p33212/Proteomics/LUMOS_2/cfortes_20240104/20240104_005_autoQC03dia.raw fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2023-12-18 15:40:07.957222 | timeMax: 2024-01-08 15:40:07.957816 | timeDiff: 1814400.00059414 nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 352 using 'ggh4x' package ... Warning: Removed 1 rows containing missing values (`geom_point()`). input timeRange: 7776000 | timeMin: 2023-12-18 14:40:07.957 | timeMax: 2024-01-08 14:40:07.958 | timeDiff: 1814400.00099993 nFacets: 4 nrow dataFiltered(): 352 using 'ggh4x' package ... Warning: Removed 1 rows containing missing values (`geom_point()`). NA nFacets: 3 reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt Warning: One or more parsing issues, call `problems()` on your data frame for details, e.g.: dat <- vroom(...) problems(dat) nFacets: 1 vals$rawrr: FALSE vals$rawDiag: FALSE vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 36 using 'ggh4x' package ... nrow dataFiltered(): 169 using 'ggh4x' package ... `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? NA fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2023-12-18 16:00:13.649451 | timeMax: 2024-01-08 16:00:13.65004 | timeDiff: 1814400.00058818 nFacets: 4 nFacets: 3 reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt Warning: One or more parsing issues, call `problems()` on your data frame for details, e.g.: dat <- vroom(...) problems(dat) nFacets: 1 vals$rawrr: FALSE vals$rawDiag: FALSE vals$rawrr: FALSE vals$rawDiag: FALSE vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 36 using 'ggh4x' package ... nrow dataFiltered(): 195 using 'ggh4x' package ... `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? input timeRange: 7776000 | timeMin: 2023-12-18 15:00:13.64945 | timeMax: 2024-01-08 15:00:13.65004 | timeDiff: 1814400.00059009 nFacets: 3 nrow dataFiltered(): 195 using 'ggh4x' package ... `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? nFacets: 1 nrow dataFiltered(): 36 using 'ggh4x' package ... input timeRange: 7776000 | timeMin: 2023-12-18 15:00:13.649 | timeMax: 2024-01-08 15:00:13.65 | timeDiff: 1814400.00100017 nFacets: 3 nrow dataFiltered(): 195 using 'ggh4x' package ... `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? nFacets: 1 nrow dataFiltered(): 36 using 'ggh4x' package ... p33212/Proteomics/LUMOS_2/cfortes_20240108/20240108_003_autoQC03dda.raw plotClick: fn has changed to /srv/www/htdocs//p33212/Proteomics/LUMOS_2/cfortes_20240108/20240108_003_autoQC03dda.raw NA p33212/Proteomics/LUMOS_2/cfortes_20240108/20240108_003_autoQC03dda.raw NA plotClick: p33212/Proteomics/LUMOS_2/cfortes_20240108/20240108_003_autoQC03dda.raw fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2023-12-18 16:01:03.680326 | timeMax: 2024-01-08 16:01:03.68103 | timeDiff: 1814400.00070453 nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 128 using 'ggh4x' package ... input timeRange: 7776000 | timeMin: 2023-12-18 15:01:03.68 | timeMax: 2024-01-08 15:01:03.681 | timeDiff: 1814400.00099993 nFacets: 4 nrow dataFiltered(): 128 using 'ggh4x' package ... nFacets: 4 nrow dataFiltered(): 352 using 'ggh4x' package ... Warning: Removed 1 rows containing missing values (`geom_point()`). NA nFacets: 3 reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt Warning: One or more parsing issues, call `problems()` on your data frame for details, e.g.: dat <- vroom(...) problems(dat) nFacets: 1 vals$rawrr: FALSE vals$rawDiag: FALSE vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 36 using 'ggh4x' package ... nrow dataFiltered(): 195 using 'ggh4x' package ... `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? NA p33212/Proteomics/LUMOS_2/cfortes_20240104/20240104_005_autoQC03dia.raw NA NA input timeRange: 7776000 | timeMin: 2023-12-18 15:01:03.68 | timeMax: 2024-01-08 15:01:14.31032 | timeDiff: 1814410.63032007 nFacets: 3 nrow dataFiltered(): 195 using 'ggh4x' package ... `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? nFacets: 1 nrow dataFiltered(): 36 using 'ggh4x' package ... input timeRange: 7776000 | timeMin: 2023-12-18 15:01:03.68 | timeMax: 2024-01-08 15:01:14.31 | timeDiff: 1814410.62999988 nFacets: 3 nrow dataFiltered(): 195 using 'ggh4x' package ... `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? nFacets: 1 nrow dataFiltered(): 36 using 'ggh4x' package ... p33212/Proteomics/LUMOS_2/cfortes_20240104/20240104_005_autoQC03dia.raw NA p33212/Proteomics/LUMOS_2/cfortes_20240104/20240104_005_autoQC03dia.raw plotClick: fn has changed to /srv/www/htdocs//p33212/Proteomics/LUMOS_2/cfortes_20240104/20240104_005_autoQC03dia.raw plotClick: fn has changed to /srv/www/htdocs//NA NA p33212/Proteomics/LUMOS_2/cfortes_20240104/20240104_005_autoQC03dia.raw plotClick: fn has changed to /srv/www/htdocs//p33212/Proteomics/LUMOS_2/cfortes_20240104/20240104_005_autoQC03dia.raw plotClick: fn has changed to /srv/www/htdocs//NA plotClick: fn has changed to /srv/www/htdocs//p33212/Proteomics/LUMOS_2/cfortes_20240104/20240104_005_autoQC03dia.raw fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2023-12-18 16:05:45.518062 | timeMax: 2024-01-08 16:05:45.518633 | timeDiff: 1814400.00057149 nFacets: 4 nFacets: 1 reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt Warning: One or more parsing issues, call `problems()` on your data frame for details, e.g.: dat <- vroom(...) problems(dat) nFacets: 1 vals$rawrr: FALSE vals$rawDiag: FALSE vals$rawrr: FALSE vals$rawDiag: FALSE vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 90 using 'ggh4x' package ... nrow dataFiltered(): 13 using 'ggh4x' package ... `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? input timeRange: 7776000 | timeMin: 2023-12-18 15:05:45.51806 | timeMax: 2024-01-08 15:05:45.51863 | timeDiff: 1814400.00056982 nFacets: 1 nrow dataFiltered(): 13 using 'ggh4x' package ... `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? nFacets: 1 nrow dataFiltered(): 90 using 'ggh4x' package ... input timeRange: 7776000 | timeMin: 2023-12-18 15:05:45.518 | timeMax: 2024-01-08 15:05:45.519 | timeDiff: 1814400.00100017 nFacets: 1 nrow dataFiltered(): 13 using 'ggh4x' package ... `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? nFacets: 1 nrow dataFiltered(): 90 using 'ggh4x' package ... nFacets: 3 nrow dataFiltered(): 195 using 'ggh4x' package ... `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? nFacets: 1 nrow dataFiltered(): 36 using 'ggh4x' package ... NA input timeRange: 7776000 | timeMin: 2023-12-04 15:05:48.248 | timeMax: 2024-01-08 15:05:45.519 | timeDiff: 3023997.27100015 nFacets: 3 nrow dataFiltered(): 325 using 'ggh4x' package ... `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? `geom_line()`: Each group consists of only one observation. ℹ Do you need to adjust the group aesthetic? nFacets: 1 nrow dataFiltered(): 126 using 'ggh4x' package ... NA p33212/Proteomics/LUMOS_2/cfortes_20240104/20240104_005_autoQC03dia.raw NA p33212/Proteomics/LUMOS_2/cfortes_20240108/20240108_003_autoQC03dda.raw NA p33212/Proteomics/LUMOS_2/cfortes_20240108/20240108_003_autoQC03dda.raw NA plotClick: fn has changed to /srv/www/htdocs//NA p33212/Proteomics/LUMOS_2/cfortes_20240108/20240108_003_autoQC03dda.raw plotClick: fn has changed to /srv/www/htdocs//p33212/Proteomics/LUMOS_2/cfortes_20240108/20240108_003_autoQC03dda.raw plotClick: fn has changed to /srv/www/htdocs//p33212/Proteomics/LUMOS_2/cfortes_20240104/20240104_005_autoQC03dia.raw p33212/Proteomics/LUMOS_2/cfortes_20240104/20240104_005_autoQC03dia.raw plotClick: plotClick: NA NA nFacets: 4 nrow dataFiltered(): 656 using 'ggh4x' package ... Warning: Removed 2 rows containing missing values (`geom_point()`). NA plotClick: fn has changed to /srv/www/htdocs//NA plotClick: fn has changed to /srv/www/htdocs//NA p33212/Proteomics/LUMOS_2/cfortes_20240108/20240108_003_autoQC03dda.raw plotClick: fn has changed to /srv/www/htdocs//p33212/Proteomics/LUMOS_2/cfortes_20240108/20240108_003_autoQC03dda.raw NA