Listening on http://127.0.0.1:35141

Attaching package: 'shinydashboard'

The following object is masked from 'package:graphics':

    box

Loading required package: readr
Loading required package: reshape2
Loading required package: lattice
Loading required package: rawDiag
Loading required package: rawrr
Loading required package: ggnewscale
fn has changed to NA
fn has changed to NA
fn has changed to NA
fn has changed to NA
nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
input timeRange: 7776000 | timeMin: 2023-12-28 12:06:30.880255 | timeMax: 2024-02-26 12:06:30.880911 | timeDiff: 5184000.00065613
Loading required package: bfabricShiny

Attaching package: 'bfabricShiny'

The following object is masked from 'package:base':

    save

nFacets: 4
nFacets: 1
reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt
Warning: One or more parsing issues, call `problems()` on your data frame for
details, e.g.:
  dat <- vroom(...)
  problems(dat)
nFacets: 1
nFacets: 2
nFacets: 1
vals$rawrr: FALSE
vals$rawDiag: FALSE
vals$rawrr: FALSE
vals$rawDiag: FALSE
vals$rawrr: FALSE
vals$rawDiag: FALSE
nrow dataFiltered(): 234
Loading required package: ggh4x
Loading required package: ggplot2
using 'ggh4x' package ...
nrow dataFiltered(): 572
using 'ggh4x' package ...
input timeRange: 7776000 | timeMin: 2023-12-28 11:06:30.88025 | timeMax: 2024-02-26 11:06:30.88091 | timeDiff: 5184000.00065994
nFacets: 2
nrow dataFiltered(): 572
using 'ggh4x' package ...
nFacets: 1
nrow dataFiltered(): 234
using 'ggh4x' package ...
input timeRange: 7776000 | timeMin: 2023-12-28 11:06:30.88 | timeMax: 2024-02-26 11:06:30.881 | timeDiff: 5184000.00099993
nFacets: 2
nrow dataFiltered(): 572
using 'ggh4x' package ...
nFacets: 1
nrow dataFiltered(): 234
using 'ggh4x' package ...
NA
p34351/Proteomics/LUMOS_2/analytic_20240223/20240223_C34351_019_autoQC03dda.raw
plotClick: 
fn has changed to /srv/www/htdocs//p34351/Proteomics/LUMOS_2/analytic_20240223/20240223_C34351_019_autoQC03dda.raw
Warning in file(con, "w") :
  cannot open file '/usr/local/lib/R/site-library/fgczqcms/shiny/fgczqcms-dashboard/logs-qc/shinylogs_fgczqcms-dashboard_1708945586440502000.json': Permission denied
Warning: Error in file: cannot open the connection
  34: file
  33: writeLines
  32: jsonlite::write_json
  31: write_logs_json
  30: write_logs
  29: callback
   1: runApp