Listening on http://127.0.0.1:40307 Attaching package: 'shinydashboard' The following object is masked from 'package:graphics': box Loading required package: readr Loading required package: reshape2 Loading required package: lattice Loading required package: rawDiag Loading required package: rawrr Loading required package: ggnewscale fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2024-01-21 10:02:49.232866 | timeMax: 2024-03-21 10:02:49.233449 | timeDiff: 5184000.00058389 Loading required package: bfabricShiny Attaching package: 'bfabricShiny' The following object is masked from 'package:base': save nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE input timeRange: 7776000 | timeMin: 2024-01-21 09:02:49.233 | timeMax: 2024-03-21 09:02:49.233 | timeDiff: 5184000 nFacets: 4 nrow dataFiltered(): 1184 Loading required package: ggh4x Loading required package: ggplot2 using 'ggh4x' package ... Warning: Removed 10 rows containing missing values (`geom_point()`). NA nFacets: 4 nrow dataFiltered(): 1872 using 'ggh4x' package ... Warning: Removed 7 rows containing missing values (`geom_point()`). fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2024-01-21 10:10:51.383419 | timeMax: 2024-03-21 10:10:51.383997 | timeDiff: 5184000.00057817 nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 1872 using 'ggh4x' package ... Warning: Removed 7 rows containing missing values (`geom_point()`). input timeRange: 7776000 | timeMin: 2024-01-21 09:10:51.383 | timeMax: 2024-03-21 09:10:51.384 | timeDiff: 5184000.00100017 nFacets: 4 nrow dataFiltered(): 1872 using 'ggh4x' package ... Warning: Removed 7 rows containing missing values (`geom_point()`). p34630/Proteomics/LUMOS_1/analytic_20240320/20240320_C34630_013_autoQC01.raw plotClick: fn has changed to /srv/www/htdocs//p34630/Proteomics/LUMOS_1/analytic_20240320/20240320_C34630_013_autoQC01.raw plotClick: plotClick: p34630/Proteomics/LUMOS_1/analytic_20240320/20240320_C34630_013_autoQC01.raw plotClick: p34630/Proteomics/LUMOS_1/analytic_20240320/20240320_C34630_013_autoQC01.raw plotClick: plotClick: fn has changed to /srv/www/htdocs//NA NA p31573/Proteomics/LUMOS_1/yichichen_20240315/20240315_011_autoQC01.raw p34630/Proteomics/LUMOS_1/analytic_20240320/20240320_C34630_013_autoQC01.raw p34630/Proteomics/LUMOS_1/analytic_20240320/20240320_C34630_013_autoQC01.raw NA p34630/Proteomics/LUMOS_1/analytic_20240320/20240320_C34630_009_autoQC01.raw p34630/Proteomics/LUMOS_1/analytic_20240320/20240320_C34630_005_autoQC01.raw fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2024-01-21 10:11:29.403579 | timeMax: 2024-03-21 10:11:29.404199 | timeDiff: 5184000.00061989 nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 1872 using 'ggh4x' package ... Warning: Removed 7 rows containing missing values (`geom_point()`). input timeRange: 7776000 | timeMin: 2024-01-21 09:11:29.404 | timeMax: 2024-03-21 09:11:29.404 | timeDiff: 5184000 nFacets: 4 nrow dataFiltered(): 1872 using 'ggh4x' package ... Warning: Removed 7 rows containing missing values (`geom_point()`). NA p34630/Proteomics/LUMOS_1/analytic_20240320/20240320_C34630_013_autoQC01.raw p34630/Proteomics/LUMOS_1/analytic_20240320/20240320_C34630_013_autoQC01.raw p34630/Proteomics/LUMOS_1/analytic_20240320/20240320_C34630_013_autoQC01.raw Warning in observe() : timeDiff is higher than timeRange fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 2592000 | timeMin: 2024-01-21 10:11:57.473068 | timeMax: 2024-03-21 10:11:57.473659 | timeDiff: 5184000.0005908 nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 2592000 | timeMin: 2024-02-20 10:11:58.477091 | timeMax: 2024-03-21 10:11:57.473659 | timeDiff: 2591998.99656844 nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 832 using 'ggh4x' package ... Warning: Removed 7 rows containing missing values (`geom_point()`). input timeRange: 2592000 | timeMin: 2024-02-20 09:11:58.477 | timeMax: 2024-03-21 09:11:57.474 | timeDiff: 2591998.99699998 nFacets: 4 nrow dataFiltered(): 832 using 'ggh4x' package ... Warning: Removed 7 rows containing missing values (`geom_point()`). p34630/Proteomics/LUMOS_1/analytic_20240320/20240320_C34630_009_autoQC01.raw p34630/Proteomics/LUMOS_1/analytic_20240320/20240320_C34630_013_autoQC01.raw p34630/Proteomics/LUMOS_1/analytic_20240320/20240320_C34630_013_autoQC01.raw p34630/Proteomics/LUMOS_1/analytic_20240320/20240320_C34630_013_autoQC01.raw p34630/Proteomics/LUMOS_1/analytic_20240320/20240320_C34630_013_autoQC01.raw p34630/Proteomics/LUMOS_1/analytic_20240320/20240320_C34630_013_autoQC01.raw p34630/Proteomics/LUMOS_1/analytic_20240320/20240320_C34630_005_autoQC01.raw NA p34630/Proteomics/LUMOS_1/analytic_20240320/20240320_C34630_013_autoQC01.raw p34630/Proteomics/LUMOS_1/analytic_20240320/20240320_C34630_013_autoQC01.raw p34630/Proteomics/LUMOS_1/analytic_20240320/20240320_C34630_013_autoQC01.raw NA p31573/Proteomics/LUMOS_1/yichichen_20240315/20240315_024_autoQC01.raw NA p31573/Proteomics/LUMOS_1/yichichen_20240315/20240315_024_autoQC01.raw plotClick: fn has changed to /srv/www/htdocs//p31573/Proteomics/LUMOS_1/yichichen_20240315/20240315_024_autoQC01.raw NA p31573/Proteomics/LUMOS_1/yichichen_20240315/20240315_024_autoQC01.raw p31573/Proteomics/LUMOS_1/yichichen_20240315/20240315_024_autoQC01.raw NA p31573/Proteomics/LUMOS_1/yichichen_20240315/20240315_024_autoQC01.raw p34630/Proteomics/LUMOS_1/analytic_20240320/20240320_C34630_009_autoQC01.raw p34630/Proteomics/LUMOS_1/analytic_20240320/20240320_C34630_013_autoQC01.raw p34630/Proteomics/LUMOS_1/analytic_20240320/20240320_C34630_013_autoQC01.raw p34630/Proteomics/LUMOS_1/analytic_20240320/20240320_C34630_013_autoQC01.raw fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 2592000 | timeMin: 2024-01-21 10:12:57.656118 | timeMax: 2024-03-21 10:12:57.656741 | timeDiff: 5184000.00062299 nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 2592000 | timeMin: 2024-02-20 10:12:58.660367 | timeMax: 2024-03-21 10:12:57.656741 | timeDiff: 2591998.99637389 nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 832 using 'ggh4x' package ... Warning: Removed 7 rows containing missing values (`geom_point()`). input timeRange: 2592000 | timeMin: 2024-02-20 09:12:58.66 | timeMax: 2024-03-21 09:12:57.657 | timeDiff: 2591998.99699998 nFacets: 4 nrow dataFiltered(): 832 using 'ggh4x' package ... Warning: Removed 7 rows containing missing values (`geom_point()`). input timeRange: 2592000 | timeMin: 2024-02-20 10:12:59.702 | timeMax: 2024-03-21 09:12:57.657 | timeDiff: 2591997.95499969 nFacets: 4 nrow dataFiltered(): 832 using 'ggh4x' package ... Warning: Removed 7 rows containing missing values (`geom_point()`). input timeRange: 2592000 | timeMin: 2024-02-20 09:12:59.702 | timeMax: 2024-03-21 09:12:57.657 | timeDiff: 2591997.95500016 nFacets: 4 nrow dataFiltered(): 832 using 'ggh4x' package ... Warning: Removed 7 rows containing missing values (`geom_point()`). input timeRange: 2592000 | timeMin: 2024-02-20 10:13:01.687279 | timeMax: 2024-03-21 09:12:57.657 | timeDiff: 2591995.96972084 nFacets: 4 nrow dataFiltered(): 832 using 'ggh4x' package ... Warning: Removed 7 rows containing missing values (`geom_point()`). input timeRange: 2592000 | timeMin: 2024-02-20 09:13:01.687 | timeMax: 2024-03-21 09:12:57.657 | timeDiff: 2591995.97000003 nFacets: 4 nrow dataFiltered(): 832 using 'ggh4x' package ... Warning: Removed 7 rows containing missing values (`geom_point()`). input timeRange: 2592000 | timeMin: 2024-02-20 10:13:03.660546 | timeMax: 2024-03-21 09:12:57.657 | timeDiff: 2591993.99645448 nFacets: 4 nrow dataFiltered(): 832 using 'ggh4x' package ... Warning: Removed 7 rows containing missing values (`geom_point()`). input timeRange: 2592000 | timeMin: 2024-02-20 09:13:03.661 | timeMax: 2024-03-21 09:12:57.657 | timeDiff: 2591993.99600005 nFacets: 4 nrow dataFiltered(): 832 using 'ggh4x' package ... Warning: Removed 7 rows containing missing values (`geom_point()`). input timeRange: 2592000 | timeMin: 2024-02-20 10:13:05.654537 | timeMax: 2024-03-21 09:12:57.657 | timeDiff: 2591992.00246286 nFacets: 4 nrow dataFiltered(): 832 using 'ggh4x' package ... Warning: Removed 7 rows containing missing values (`geom_point()`). input timeRange: 2592000 | timeMin: 2024-02-20 09:13:05.655 | timeMax: 2024-03-21 09:12:57.657 | timeDiff: 2591992.00200009 nFacets: 4 nrow dataFiltered(): 832 using 'ggh4x' package ... Warning: Removed 7 rows containing missing values (`geom_point()`). input timeRange: 2592000 | timeMin: 2024-02-20 10:13:07.646084 | timeMax: 2024-03-21 09:12:57.657 | timeDiff: 2591990.01091623 NA nFacets: 4 nrow dataFiltered(): 832 using 'ggh4x' package ... Warning: Removed 7 rows containing missing values (`geom_point()`). input timeRange: 2592000 | timeMin: 2024-02-20 09:13:07.646 | timeMax: 2024-03-21 09:12:57.657 | timeDiff: 2591990.01100016 nFacets: 4 nrow dataFiltered(): 832 using 'ggh4x' package ... Warning: Removed 7 rows containing missing values (`geom_point()`). input timeRange: 2592000 | timeMin: 2024-02-20 10:13:09.717667 | timeMax: 2024-03-21 09:12:57.657 | timeDiff: 2591987.9393332 nFacets: 4 nrow dataFiltered(): 832 using 'ggh4x' package ... Warning: Removed 7 rows containing missing values (`geom_point()`). input timeRange: 2592000 | timeMin: 2024-02-20 09:13:09.718 | timeMax: 2024-03-21 09:12:57.657 | timeDiff: 2591987.93900013 nFacets: 4 nrow dataFiltered(): 832 using 'ggh4x' package ... Warning: Removed 7 rows containing missing values (`geom_point()`). input timeRange: 2592000 | timeMin: 2024-02-20 10:13:11.899078 | timeMax: 2024-03-21 09:12:57.657 | timeDiff: 2591985.75792241 p34630/Proteomics/LUMOS_1/analytic_20240320/20240320_C34630_013_autoQC01.raw p34630/Proteomics/LUMOS_1/analytic_20240320/20240320_C34630_013_autoQC01.raw nFacets: 4 nrow dataFiltered(): 832 using 'ggh4x' package ... Warning: Removed 7 rows containing missing values (`geom_point()`). input timeRange: 2592000 | timeMin: 2024-02-20 09:13:11.899 | timeMax: 2024-03-21 09:12:57.657 | timeDiff: 2591985.75800014 nFacets: 4 nrow dataFiltered(): 832 using 'ggh4x' package ... Warning: Removed 7 rows containing missing values (`geom_point()`). input timeRange: 2592000 | timeMin: 2024-02-20 10:13:14.175553 | timeMax: 2024-03-21 09:12:57.657 | timeDiff: 2591983.48144674 p34630/Proteomics/LUMOS_1/analytic_20240320/20240320_C34630_013_autoQC01.raw p34630/Proteomics/LUMOS_1/analytic_20240320/20240320_C34630_013_autoQC01.raw nFacets: 4 nrow dataFiltered(): 832 using 'ggh4x' package ... Warning: Removed 7 rows containing missing values (`geom_point()`). input timeRange: 2592000 | timeMin: 2024-02-20 09:13:14.176 | timeMax: 2024-03-21 09:12:57.657 | timeDiff: 2591983.48099995 nFacets: 4 nrow dataFiltered(): 832 using 'ggh4x' package ... Warning: Removed 7 rows containing missing values (`geom_point()`). input timeRange: 2592000 | timeMin: 2024-02-20 10:13:16.210828 | timeMax: 2024-03-21 09:12:57.657 | timeDiff: 2591981.44617224 p34630/Proteomics/LUMOS_1/analytic_20240320/20240320_C34630_013_autoQC01.raw NA nFacets: 4 nrow dataFiltered(): 832 using 'ggh4x' package ... Warning: Removed 7 rows containing missing values (`geom_point()`). input timeRange: 2592000 | timeMin: 2024-02-20 09:13:16.211 | timeMax: 2024-03-21 09:12:57.657 | timeDiff: 2591981.4460001 nFacets: 4 nrow dataFiltered(): 832 using 'ggh4x' package ... Warning: Removed 7 rows containing missing values (`geom_point()`). input timeRange: 2592000 | timeMin: 2024-02-20 10:13:18.15591 | timeMax: 2024-03-21 09:12:57.657 | timeDiff: 2591979.50109005 nFacets: 4 nrow dataFiltered(): 832 using 'ggh4x' package ... Warning: Removed 7 rows containing missing values (`geom_point()`). input timeRange: 2592000 | timeMin: 2024-02-20 09:13:18.156 | timeMax: 2024-03-21 09:12:57.657 | timeDiff: 2591979.50100017 nFacets: 4 nrow dataFiltered(): 832 using 'ggh4x' package ... Warning: Removed 7 rows containing missing values (`geom_point()`). input timeRange: 2592000 | timeMin: 2024-02-20 10:13:20.194687 | timeMax: 2024-03-21 09:12:57.657 | timeDiff: 2591977.46231294 nFacets: 4 nrow dataFiltered(): 832 using 'ggh4x' package ... Warning: Removed 7 rows containing missing values (`geom_point()`). input timeRange: 2592000 | timeMin: 2024-02-20 09:13:20.195 | timeMax: 2024-03-21 09:12:57.657 | timeDiff: 2591977.46200013 nFacets: 4 nrow dataFiltered(): 832 using 'ggh4x' package ... Warning: Removed 7 rows containing missing values (`geom_point()`). input timeRange: 2592000 | timeMin: 2024-02-20 10:13:22.193106 | timeMax: 2024-03-21 09:12:57.657 | timeDiff: 2591975.46389365 nFacets: 4 nrow dataFiltered(): 832 using 'ggh4x' package ... Warning: Removed 7 rows containing missing values (`geom_point()`). input timeRange: 2592000 | timeMin: 2024-02-20 09:13:22.193 | timeMax: 2024-03-21 09:12:57.657 | timeDiff: 2591975.46399999 nFacets: 4 nrow dataFiltered(): 832 using 'ggh4x' package ... Warning: Removed 7 rows containing missing values (`geom_point()`). input timeRange: 2592000 | timeMin: 2024-02-20 10:13:24.17234 | timeMax: 2024-03-21 09:12:57.657 | timeDiff: 2591973.48466039 fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2024-01-21 10:13:29.543418 | timeMax: 2024-03-21 10:13:29.544088 | timeDiff: 5184000.00067067 nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp Warning in observe() : timeDiff is higher than timeRange nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 1184 using 'ggh4x' package ... Warning: Removed 10 rows containing missing values (`geom_point()`). input timeRange: 7776000 | timeMin: 2024-01-21 09:13:29.543 | timeMax: 2024-03-21 09:13:29.544 | timeDiff: 5184000.00099993 nFacets: 4 nrow dataFiltered(): 1184 using 'ggh4x' package ... Warning: Removed 10 rows containing missing values (`geom_point()`). nFacets: 4 nrow dataFiltered(): 1872 using 'ggh4x' package ... Warning: Removed 7 rows containing missing values (`geom_point()`). p34630/Proteomics/LUMOS_1/analytic_20240320/20240320_C34630_013_autoQC01.raw p34630/Proteomics/LUMOS_1/analytic_20240320/20240320_C34630_013_autoQC01.raw p34630/Proteomics/LUMOS_1/analytic_20240320/20240320_C34630_013_autoQC01.raw p34630/Proteomics/LUMOS_1/analytic_20240320/20240320_C34630_013_autoQC01.raw p34630/Proteomics/LUMOS_1/analytic_20240320/20240320_C34630_013_autoQC01.raw p34630/Proteomics/LUMOS_1/analytic_20240320/20240320_C34630_009_autoQC01.raw p34630/Proteomics/LUMOS_1/analytic_20240320/20240320_C34630_005_autoQC01.raw p34630/Proteomics/LUMOS_1/analytic_20240320/20240320_C34630_005_autoQC01.raw NA p34630/Proteomics/LUMOS_1/analytic_20240320/20240320_C34630_013_autoQC01.raw p34630/Proteomics/LUMOS_1/analytic_20240320/20240320_C34630_013_autoQC01.raw NA p34630/Proteomics/LUMOS_1/analytic_20240320/20240320_C34630_013_autoQC01.raw p34630/Proteomics/LUMOS_1/analytic_20240320/20240320_C34630_009_autoQC01.raw p34630/Proteomics/LUMOS_1/analytic_20240320/20240320_C34630_005_autoQC01.raw p25334/Proteomics/LUMOS_1/dlesli_20240229_DLP236/20240229_055_autoQC01.raw fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 2592000 | timeMin: 2024-01-21 10:14:45.550942 | timeMax: 2024-03-21 10:14:45.55157 | timeDiff: 5184000.00062776 nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 2592000 | timeMin: 2024-02-20 10:14:46.555252 | timeMax: 2024-03-21 10:14:45.55157 | timeDiff: 2591998.99631786 nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 832 using 'ggh4x' package ... Warning: Removed 7 rows containing missing values (`geom_point()`). input timeRange: 2592000 | timeMin: 2024-02-20 09:14:46.555 | timeMax: 2024-03-21 09:14:45.552 | timeDiff: 2591998.99699998 nFacets: 4 nrow dataFiltered(): 832 using 'ggh4x' package ... Warning: Removed 7 rows containing missing values (`geom_point()`). fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 2592000 | timeMin: 2024-01-21 10:17:09.129718 | timeMax: 2024-03-21 10:17:09.130307 | timeDiff: 5184000.00058913 nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 2592000 | timeMin: 2024-02-20 10:17:10.133671 | timeMax: 2024-03-21 10:17:09.130307 | timeDiff: 2591998.99663687 nFacets: 4 input timeRange: 2592000 | timeMin: 2024-02-20 09:17:10.134 | timeMax: 2024-03-21 09:17:09.13 | timeDiff: 2591998.99600005 nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 848 using 'ggh4x' package ... Warning: Removed 7 rows containing missing values (`geom_point()`). p30646/Proteomics/LUMOS_1/gnarduzzi_20240320/20240320_001_autoQC01.raw p30646/Proteomics/LUMOS_1/gnarduzzi_20240320/20240320_001_autoQC01.raw NA vals$rawrr: TRUE vals$rawDiag: TRUE p30646/Proteomics/LUMOS_1/gnarduzzi_20240320/20240320_001_autoQC01.raw plotClick: fn has changed to /srv/www/htdocs//p30646/Proteomics/LUMOS_1/gnarduzzi_20240320/20240320_001_autoQC01.raw plotChargeState Reading raw file: /srv/www/htdocs//p30646/Proteomics/LUMOS_1/gnarduzzi_20240320/20240320_001_autoQC01.raw Plotting chromatograms ... Read 22032 items Warning: Error in graphics::plot.new: figure margins too large 130: graphics::plot.new 127: startPNG 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$__autoQC01__-rawDiag-autoQC03-plot 1: runApp reading index for 20240320_001_autoQC01.raw... reading took11.299seconds NA plotCycleLoad `geom_smooth()` using formula = 'y ~ x' plotCycleTime plotInjectionTime plotLockMassCorrection Warning: Error in : Discrete value supplied to continuous scale 188: stop 187: train_continuous 186: self$range$train 185: train 184: scales[[i]][[method]] 183: FUN 182: lapply 181: FUN 180: lapply 179: scale_apply 178: train_scales 177: self$facet$train_scales 176: train_position 175: layout$train_position 174: ggplot_build.ggplot 172: print.ggplot 167: func 165: f 164: Reduce 155: do 154: hybrid_chain 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$__autoQC01__-rawDiag-autoQC03-plot 1: runApp plotMassDistribution plotMzDistribution plotTicBasepeak plotChargeState fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2024-01-21 12:22:25.621282 | timeMax: 2024-03-21 12:22:25.621889 | timeDiff: 5184000.00060725 nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp nFacets: 0 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$autoQC03-DDA-ui 1: runApp reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt Warning: One or more parsing issues, call `problems()` on your data frame for details, e.g.: dat <- vroom(...) problems(dat) nFacets: 1 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$autoQC03-DIA-ui 1: runApp nFacets: 1 nFacets: 1 vals$rawrr: FALSE vals$rawDiag: FALSE vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 576 using 'ggh4x' package ... nrow dataFiltered(): 260 using 'ggh4x' package ... input timeRange: 7776000 | timeMin: 2024-01-21 11:22:25.62128 | timeMax: 2024-03-21 11:22:25.62189 | timeDiff: 5184000.00060987 nFacets: 1 nrow dataFiltered(): 260 using 'ggh4x' package ... nFacets: 1 nrow dataFiltered(): 576 using 'ggh4x' package ... input timeRange: 7776000 | timeMin: 2024-01-21 11:22:25.621 | timeMax: 2024-03-21 11:22:25.622 | timeDiff: 5184000.00099993 nFacets: 1 nrow dataFiltered(): 260 using 'ggh4x' package ... nFacets: 1 nrow dataFiltered(): 576 using 'ggh4x' package ... nFacets: 1 nrow dataFiltered(): 455 using 'ggh4x' package ... nFacets: 1 nrow dataFiltered(): 0 NA plotClick: fn has changed to /srv/www/htdocs//NA p34701/Proteomics/QEXACTIVE_1/analytic_20240320/20240320_C34701_005_autoQC03dda.raw plotClick: fn has changed to /srv/www/htdocs//p34701/Proteomics/QEXACTIVE_1/analytic_20240320/20240320_C34701_005_autoQC03dda.raw NA p34638/Proteomics/QEXACTIVE_1/analytic_20240318/20240318_C34638_005_autoQC03dda.raw plotClick: fn has changed to /srv/www/htdocs//p34638/Proteomics/QEXACTIVE_1/analytic_20240318/20240318_C34638_005_autoQC03dda.raw p3000/Proteomics/QEXACTIVE_1/analytic_20240315/20240315_C3000_005_autoQC03dda.raw plotClick: fn has changed to /srv/www/htdocs//p3000/Proteomics/QEXACTIVE_1/analytic_20240315/20240315_C3000_005_autoQC03dda.raw fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2024-01-21 13:13:43.57365 | timeMax: 2024-03-21 13:13:43.574226 | timeDiff: 5184000.00057673 nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 1184 using 'ggh4x' package ... Warning: Removed 10 rows containing missing values (`geom_point()`). input timeRange: 7776000 | timeMin: 2024-01-21 12:13:43.574 | timeMax: 2024-03-21 12:13:43.574 | timeDiff: 5184000 nFacets: 4 nrow dataFiltered(): 1184 using 'ggh4x' package ... Warning: Removed 10 rows containing missing values (`geom_point()`). fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2024-01-21 16:18:17.754752 | timeMax: 2024-03-21 16:18:17.755407 | timeDiff: 5184000.00065517 nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 1184 using 'ggh4x' package ... Warning: Removed 10 rows containing missing values (`geom_point()`). input timeRange: 7776000 | timeMin: 2024-01-21 15:18:17.755 | timeMax: 2024-03-21 15:18:17.755 | timeDiff: 5184000 nFacets: 4 nrow dataFiltered(): 1184 using 'ggh4x' package ... Warning: Removed 10 rows containing missing values (`geom_point()`). fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 2592000 | timeMin: 2024-01-21 16:32:35.322091 | timeMax: 2024-03-21 16:32:35.32276 | timeDiff: 5184000.00066948 nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 2592000 | timeMin: 2024-02-20 16:32:36.3269 | timeMax: 2024-03-21 16:32:35.32276 | timeDiff: 2591998.99585986 nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 848 using 'ggh4x' package ... Warning: Removed 7 rows containing missing values (`geom_point()`). input timeRange: 2592000 | timeMin: 2024-02-20 15:32:36.327 | timeMax: 2024-03-21 15:32:35.323 | timeDiff: 2591998.99600005 nFacets: 4 nrow dataFiltered(): 848 using 'ggh4x' package ... Warning: Removed 7 rows containing missing values (`geom_point()`). input timeRange: 2592000 | timeMin: 2024-02-20 16:32:37.340493 | timeMax: 2024-03-21 15:32:35.323 | timeDiff: 2591997.98250723 nFacets: 4 nrow dataFiltered(): 848 using 'ggh4x' package ... Warning: Removed 7 rows containing missing values (`geom_point()`). input timeRange: 2592000 | timeMin: 2024-02-20 15:32:37.34 | timeMax: 2024-03-21 15:32:35.323 | timeDiff: 2591997.98300004 nFacets: 4 nrow dataFiltered(): 848 using 'ggh4x' package ... Warning: Removed 7 rows containing missing values (`geom_point()`). input timeRange: 2592000 | timeMin: 2024-02-20 16:32:39.499535 | timeMax: 2024-03-21 15:32:35.323 | timeDiff: 2591995.82346511 nFacets: 4 nrow dataFiltered(): 848 using 'ggh4x' package ... Warning: Removed 7 rows containing missing values (`geom_point()`). input timeRange: 2592000 | timeMin: 2024-02-20 15:32:39.5 | timeMax: 2024-03-21 15:32:35.323 | timeDiff: 2591995.82299995 nFacets: 4 nrow dataFiltered(): 848 using 'ggh4x' package ... Warning: Removed 7 rows containing missing values (`geom_point()`). input timeRange: 2592000 | timeMin: 2024-02-20 16:32:41.677635 | timeMax: 2024-03-21 15:32:35.323 | timeDiff: 2591993.64536476 nFacets: 4 nrow dataFiltered(): 848 using 'ggh4x' package ... Warning: Removed 7 rows containing missing values (`geom_point()`). input timeRange: 2592000 | timeMin: 2024-02-20 15:32:41.678 | timeMax: 2024-03-21 15:32:35.323 | timeDiff: 2591993.64499998 nFacets: 4 nrow dataFiltered(): 848 using 'ggh4x' package ... Warning: Removed 7 rows containing missing values (`geom_point()`). input timeRange: 2592000 | timeMin: 2024-02-20 16:32:43.697018 | timeMax: 2024-03-21 15:32:35.323 | timeDiff: 2591991.62598228 nFacets: 4 nrow dataFiltered(): 848 using 'ggh4x' package ... Warning: Removed 7 rows containing missing values (`geom_point()`). input timeRange: 2592000 | timeMin: 2024-02-20 16:32:44.88274 | timeMax: 2024-03-21 15:32:35.323 | timeDiff: 2591990.44026041 NA nFacets: 4 nrow dataFiltered(): 848 using 'ggh4x' package ... Warning: Removed 7 rows containing missing values (`geom_point()`). input timeRange: 2592000 | timeMin: 2024-02-20 15:32:44.883 | timeMax: 2024-03-21 15:32:35.323 | timeDiff: 2591990.44000006 nFacets: 4 nrow dataFiltered(): 848 using 'ggh4x' package ... Warning: Removed 7 rows containing missing values (`geom_point()`). input timeRange: 2592000 | timeMin: 2024-02-20 16:32:47.350327 | timeMax: 2024-03-21 15:32:35.323 | timeDiff: 2591987.97267318 nFacets: 4 nrow dataFiltered(): 848 using 'ggh4x' package ... Warning: Removed 7 rows containing missing values (`geom_point()`). input timeRange: 2592000 | timeMin: 2024-02-20 15:32:47.35 | timeMax: 2024-03-21 15:32:35.323 | timeDiff: 2591987.97300005 nFacets: 4 nrow dataFiltered(): 848 using 'ggh4x' package ... Warning: Removed 7 rows containing missing values (`geom_point()`). input timeRange: 2592000 | timeMin: 2024-02-20 16:32:49.759445 | timeMax: 2024-03-21 15:32:35.323 | timeDiff: 2591985.56355476 nFacets: 4 nrow dataFiltered(): 848 using 'ggh4x' package ... Warning: Removed 7 rows containing missing values (`geom_point()`). input timeRange: 2592000 | timeMin: 2024-02-20 16:32:50.80298 | timeMax: 2024-03-21 15:32:35.323 | timeDiff: 2591984.52001953 nFacets: 4 nrow dataFiltered(): 848 using 'ggh4x' package ... Warning: Removed 7 rows containing missing values (`geom_point()`). input timeRange: 2592000 | timeMin: 2024-02-20 15:32:50.803 | timeMax: 2024-03-21 15:32:35.323 | timeDiff: 2591984.51999998 nFacets: 4 nrow dataFiltered(): 848 using 'ggh4x' package ... Warning: Removed 7 rows containing missing values (`geom_point()`). input timeRange: 2592000 | timeMin: 2024-02-20 16:32:53.347012 | timeMax: 2024-03-21 15:32:35.323 | timeDiff: 2591981.97598839 fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2024-01-21 16:33:01.520676 | timeMax: 2024-03-21 16:33:01.521242 | timeDiff: 5184000.00056577 nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 1184 using 'ggh4x' package ... Warning: Removed 10 rows containing missing values (`geom_point()`). input timeRange: 7776000 | timeMin: 2024-01-21 15:33:01.521 | timeMax: 2024-03-21 15:33:01.521 | timeDiff: 5184000 nFacets: 4 nrow dataFiltered(): 1184 using 'ggh4x' package ... Warning: Removed 10 rows containing missing values (`geom_point()`). nFacets: 4 nrow dataFiltered(): 1888 using 'ggh4x' package ... Warning: Removed 7 rows containing missing values (`geom_point()`). p30646/Proteomics/LUMOS_1/gnarduzzi_20240320/20240320_001_autoQC01.raw vals$rawrr: TRUE vals$rawDiag: TRUE NA p30646/Proteomics/LUMOS_1/gnarduzzi_20240320/20240320_001_autoQC01.raw NA p30646/Proteomics/LUMOS_1/gnarduzzi_20240320/20240320_001_autoQC01.raw NA fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2024-01-21 16:34:26.308948 | timeMax: 2024-03-21 16:34:26.309901 | timeDiff: 5184000.00095272 nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 1888 using 'ggh4x' package ... Warning: Removed 7 rows containing missing values (`geom_point()`). input timeRange: 7776000 | timeMin: 2024-01-21 15:34:26.309 | timeMax: 2024-03-21 15:34:26.31 | timeDiff: 5184000.00099993 nFacets: 4 nrow dataFiltered(): 1888 using 'ggh4x' package ... Warning: Removed 7 rows containing missing values (`geom_point()`). NA p3000/Proteomics/LUMOS_1/pgehrig_20240206_Dimethylation/20240311_40_autoQC01.raw p30646/Proteomics/LUMOS_1/gnarduzzi_20240320/20240320_001_autoQC01.raw fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2024-01-21 16:37:07.100518 | timeMax: 2024-03-21 16:37:07.101471 | timeDiff: 5184000.00095344 nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 1904 using 'ggh4x' package ... Warning: Removed 7 rows containing missing values (`geom_point()`). input timeRange: 7776000 | timeMin: 2024-01-21 15:37:07.101 | timeMax: 2024-03-21 15:37:07.101 | timeDiff: 5184000 nFacets: 4 nrow dataFiltered(): 1904 using 'ggh4x' package ... Warning: Removed 7 rows containing missing values (`geom_point()`). NA p34610/Proteomics/LUMOS_1/analytic_20240319/20240319_C34610_001_autoQC01.raw NA p30646/Proteomics/LUMOS_1/gnarduzzi_20240320/20240320_004_autoQC01.raw fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2024-01-21 16:37:31.695006 | timeMax: 2024-03-21 16:37:31.695592 | timeDiff: 5184000.00058627 nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp vals$rawrr: TRUE vals$rawDiag: TRUE NA plotClick: fn has changed to /srv/www/htdocs//NA Warning in renderUI() : raw file /srv/www/htdocs//NA does not exist. Warning in renderUI() : raw file /srv/www/htdocs//NA does not exist. p30646/Proteomics/LUMOS_1/gnarduzzi_20240320/20240320_004_autoQC01.raw plotClick: fn has changed to /srv/www/htdocs//p30646/Proteomics/LUMOS_1/gnarduzzi_20240320/20240320_004_autoQC01.raw plotChargeState Reading raw file: /srv/www/htdocs//p30646/Proteomics/LUMOS_1/gnarduzzi_20240320/20240320_004_autoQC01.raw Plotting chromatograms ... Read 22032 items reading index for 20240320_004_autoQC01.raw... reading took12.037seconds reading index for 20240320_004_autoQC01.raw... reading took11.2seconds plotInjectionTime plotLockMassCorrection Warning: Error in : Discrete value supplied to continuous scale 188: stop 187: train_continuous 186: self$range$train 185: train 184: scales[[i]][[method]] 183: FUN 182: lapply 181: FUN 180: lapply 179: scale_apply 178: train_scales 177: self$facet$train_scales 176: train_position 175: layout$train_position 174: ggplot_build.ggplot 172: print.ggplot 167: func 165: f 164: Reduce 155: do 154: hybrid_chain 126: drawPlot 112: 96: drawReactive 83: renderFunc 82: output$__autoQC01__-rawDiag-autoQC03-plot 1: runApp plotPrecursorHeatmap plotTicBasepeak NA p30646/Proteomics/LUMOS_1/gnarduzzi_20240320/20240320_001_autoQC01.raw p30646/Proteomics/LUMOS_1/gnarduzzi_20240320/20240320_001_autoQC01.raw plotClick: fn has changed to /srv/www/htdocs//p30646/Proteomics/LUMOS_1/gnarduzzi_20240320/20240320_001_autoQC01.raw Reading raw file: /srv/www/htdocs//p30646/Proteomics/LUMOS_1/gnarduzzi_20240320/20240320_001_autoQC01.raw Plotting chromatograms ... Read 22032 items reading index for 20240320_001_autoQC01.raw... reading took12.305seconds p34630/Proteomics/LUMOS_1/analytic_20240320/20240320_C34630_013_autoQC01.raw p30646/Proteomics/LUMOS_1/gnarduzzi_20240320/20240320_001_autoQC01.raw plotClick: plotChargeState NA p30646/Proteomics/LUMOS_1/gnarduzzi_20240320/20240320_004_autoQC01.raw plotClick: fn has changed to /srv/www/htdocs//p30646/Proteomics/LUMOS_1/gnarduzzi_20240320/20240320_004_autoQC01.raw Reading raw file: /srv/www/htdocs//p30646/Proteomics/LUMOS_1/gnarduzzi_20240320/20240320_004_autoQC01.raw Plotting chromatograms ... Read 22032 items reading index for 20240320_004_autoQC01.raw... reading took10.939seconds NA p30646/Proteomics/LUMOS_1/gnarduzzi_20240320/20240320_001_autoQC01.raw plotClick: fn has changed to /srv/www/htdocs//p30646/Proteomics/LUMOS_1/gnarduzzi_20240320/20240320_001_autoQC01.raw Reading raw file: /srv/www/htdocs//p30646/Proteomics/LUMOS_1/gnarduzzi_20240320/20240320_001_autoQC01.raw Plotting chromatograms ... Read 22032 items reading index for 20240320_001_autoQC01.raw... reading took12.14seconds NA p30646/Proteomics/LUMOS_1/gnarduzzi_20240320/20240320_004_autoQC01.raw plotClick: fn has changed to /srv/www/htdocs//p30646/Proteomics/LUMOS_1/gnarduzzi_20240320/20240320_004_autoQC01.raw Reading raw file: /srv/www/htdocs//p30646/Proteomics/LUMOS_1/gnarduzzi_20240320/20240320_004_autoQC01.raw Plotting chromatograms ... Read 22032 items reading index for 20240320_004_autoQC01.raw... reading took11.666seconds plotClick: plotClick: p30646/Proteomics/LUMOS_1/gnarduzzi_20240320/20240320_001_autoQC01.raw plotClick: fn has changed to /srv/www/htdocs//p30646/Proteomics/LUMOS_1/gnarduzzi_20240320/20240320_001_autoQC01.raw Reading raw file: /srv/www/htdocs//p30646/Proteomics/LUMOS_1/gnarduzzi_20240320/20240320_001_autoQC01.raw Plotting chromatograms ... Read 22032 items reading index for 20240320_001_autoQC01.raw... reading took11.446seconds p30646/Proteomics/LUMOS_1/gnarduzzi_20240320/20240320_004_autoQC01.raw p30646/Proteomics/LUMOS_1/gnarduzzi_20240320/20240320_001_autoQC01.raw plotClick: plotClick: fn has changed to /srv/www/htdocs//p30646/Proteomics/LUMOS_1/gnarduzzi_20240320/20240320_004_autoQC01.raw Reading raw file: /srv/www/htdocs//p30646/Proteomics/LUMOS_1/gnarduzzi_20240320/20240320_004_autoQC01.raw Plotting chromatograms ... Read 22032 items reading index for 20240320_004_autoQC01.raw... reading took11.795seconds p30646/Proteomics/LUMOS_1/gnarduzzi_20240320/20240320_004_autoQC01.raw NA p30646/Proteomics/LUMOS_1/gnarduzzi_20240320/20240320_001_autoQC01.raw plotClick: p30646/Proteomics/LUMOS_1/gnarduzzi_20240320/20240320_004_autoQC01.raw p30646/Proteomics/LUMOS_1/gnarduzzi_20240320/20240320_001_autoQC01.raw plotClick: fn has changed to /srv/www/htdocs//p30646/Proteomics/LUMOS_1/gnarduzzi_20240320/20240320_001_autoQC01.raw Reading raw file: /srv/www/htdocs//p30646/Proteomics/LUMOS_1/gnarduzzi_20240320/20240320_001_autoQC01.raw Plotting chromatograms ... Read 22032 items reading index for 20240320_001_autoQC01.raw... reading took11.363seconds Reading raw file: /srv/www/htdocs//p30646/Proteomics/LUMOS_1/gnarduzzi_20240320/20240320_001_autoQC01.raw Plotting chromatograms ... Read 22032 items p30646/Proteomics/LUMOS_1/gnarduzzi_20240320/20240320_004_autoQC01.raw plotClick: fn has changed to /srv/www/htdocs//p30646/Proteomics/LUMOS_1/gnarduzzi_20240320/20240320_004_autoQC01.raw Reading raw file: /srv/www/htdocs//p30646/Proteomics/LUMOS_1/gnarduzzi_20240320/20240320_004_autoQC01.raw Plotting chromatograms ... Read 22032 items reading index for 20240320_004_autoQC01.raw... reading took11.29seconds Reading raw file: /srv/www/htdocs//p30646/Proteomics/LUMOS_1/gnarduzzi_20240320/20240320_004_autoQC01.raw Plotting chromatograms ... Read 22032 items NA p30646/Proteomics/LUMOS_1/gnarduzzi_20240320/20240320_001_autoQC01.raw p34630/Proteomics/LUMOS_1/analytic_20240320/20240320_C34630_013_autoQC01.raw plotClick: fn has changed to /srv/www/htdocs//p34630/Proteomics/LUMOS_1/analytic_20240320/20240320_C34630_013_autoQC01.raw Reading raw file: /srv/www/htdocs//p34630/Proteomics/LUMOS_1/analytic_20240320/20240320_C34630_013_autoQC01.raw Plotting chromatograms ... Read 22032 items reading index for 20240320_C34630_013_autoQC01.raw... reading took10.87seconds plotClick: fn has changed to /srv/www/htdocs//p33766/Proteomics/LUMOS_1/analytic_20240313/20240313_C33766_019_autoQC01.raw Reading raw file: /srv/www/htdocs//p33766/Proteomics/LUMOS_1/analytic_20240313/20240313_C33766_019_autoQC01.raw Plotting chromatograms ... Read 22032 items reading index for 20240313_C33766_019_autoQC01.raw... reading took11.138seconds p33766/Proteomics/LUMOS_1/analytic_20240313/20240313_C33766_019_autoQC01.raw NA plotClick: fn has changed to /srv/www/htdocs//p30646/Proteomics/LUMOS_1/gnarduzzi_20240320/20240320_004_autoQC01.raw Reading raw file: /srv/www/htdocs//p30646/Proteomics/LUMOS_1/gnarduzzi_20240320/20240320_004_autoQC01.raw Plotting chromatograms ... Read 22032 items reading index for 20240320_004_autoQC01.raw... reading took11.768seconds p30646/Proteomics/LUMOS_1/gnarduzzi_20240320/20240320_004_autoQC01.raw plotClick: NA p30646/Proteomics/LUMOS_1/gnarduzzi_20240320/20240320_004_autoQC01.raw plotClick: NA plotClick: fn has changed to /srv/www/htdocs//p30646/Proteomics/LUMOS_1/gnarduzzi_20240320/20240320_001_autoQC01.raw Reading raw file: /srv/www/htdocs//p30646/Proteomics/LUMOS_1/gnarduzzi_20240320/20240320_001_autoQC01.raw Plotting chromatograms ... Read 22032 items reading index for 20240320_001_autoQC01.raw... reading took11.918seconds p30646/Proteomics/LUMOS_1/gnarduzzi_20240320/20240320_001_autoQC01.raw NA plotClick: fn has changed to /srv/www/htdocs//p30646/Proteomics/LUMOS_1/gnarduzzi_20240320/20240320_004_autoQC01.raw Reading raw file: /srv/www/htdocs//p30646/Proteomics/LUMOS_1/gnarduzzi_20240320/20240320_004_autoQC01.raw Plotting chromatograms ... Read 22032 items reading index for 20240320_004_autoQC01.raw... reading took10.857seconds p30646/Proteomics/LUMOS_1/gnarduzzi_20240320/20240320_004_autoQC01.raw Execution halted Warning message: agg could not write to the given file