Listening on http://127.0.0.1:40863 Attaching package: 'shinydashboard' The following object is masked from 'package:graphics': box Loading required package: readr Loading required package: reshape2 Loading required package: lattice Loading required package: rawDiag Loading required package: rawrr Loading required package: ggnewscale fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2024-01-28 09:52:37.880487 | timeMax: 2024-03-28 09:52:37.881072 | timeDiff: 5184000.00058532 Loading required package: bfabricShiny Attaching package: 'bfabricShiny' The following object is masked from 'package:base': save nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 1824 Loading required package: ggh4x Loading required package: ggplot2 using 'ggh4x' package ... Warning: Removed 9 rows containing missing values (`geom_point()`). input timeRange: 7776000 | timeMin: 2024-01-28 08:52:37.88 | timeMax: 2024-03-28 08:52:37.881 | timeDiff: 5184000.00099993 nFacets: 4 nrow dataFiltered(): 1824 using 'ggh4x' package ... Warning: Removed 9 rows containing missing values (`geom_point()`). fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2024-01-28 10:12:45.449527 | timeMax: 2024-03-28 10:12:45.450114 | timeDiff: 5184000.00058699 nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 1136 using 'ggh4x' package ... Warning: Removed 11 rows containing missing values (`geom_point()`). Warning: Removed 4 rows containing missing values (`geom_line()`). input timeRange: 7776000 | timeMin: 2024-01-28 09:12:45.45 | timeMax: 2024-03-28 09:12:45.45 | timeDiff: 5184000 nFacets: 4 nrow dataFiltered(): 1136 using 'ggh4x' package ... Warning: Removed 11 rows containing missing values (`geom_point()`). Warning: Removed 4 rows containing missing values (`geom_line()`). nFacets: 4 nrow dataFiltered(): 1744 using 'ggh4x' package ... Warning: Removed 27 rows containing missing values (`geom_point()`). Warning: Removed 2 rows containing missing values (`geom_line()`). nFacets: 1 reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt Warning: One or more parsing issues, call `problems()` on your data frame for details, e.g.: dat <- vroom(...) problems(dat) nFacets: 1 vals$rawrr: FALSE vals$rawDiag: FALSE vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 0 nrow dataFiltered(): 455 using 'ggh4x' package ... fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2024-02-02 06:55:04.810597 | timeMax: 2024-04-02 07:55:04.81116 | timeDiff: 5184000.00056267 nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 1104 using 'ggh4x' package ... Warning: Removed 1 rows containing missing values (`geom_point()`). input timeRange: 7776000 | timeMin: 2024-02-02 05:55:04.811 | timeMax: 2024-04-02 05:55:04.811 | timeDiff: 5184000 nFacets: 4 nrow dataFiltered(): 1104 using 'ggh4x' package ... Warning: Removed 1 rows containing missing values (`geom_point()`). fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2024-02-02 07:04:44.041782 | timeMax: 2024-04-02 08:04:44.04235 | timeDiff: 5184000.00056791 nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 1104 using 'ggh4x' package ... Warning: Removed 1 rows containing missing values (`geom_point()`). input timeRange: 7776000 | timeMin: 2024-02-02 06:04:44.042 | timeMax: 2024-04-02 06:04:44.042 | timeDiff: 5184000 nFacets: 4 nrow dataFiltered(): 1104 using 'ggh4x' package ... Warning: Removed 1 rows containing missing values (`geom_point()`). fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2024-02-02 07:13:11.53224 | timeMax: 2024-04-02 08:13:11.532803 | timeDiff: 5184000.00056219 nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 1104 using 'ggh4x' package ... Warning: Removed 1 rows containing missing values (`geom_point()`). input timeRange: 7776000 | timeMin: 2024-02-02 06:13:11.532 | timeMax: 2024-04-02 06:13:11.533 | timeDiff: 5184000.00099993 nFacets: 4 nrow dataFiltered(): 1104 using 'ggh4x' package ... Warning: Removed 1 rows containing missing values (`geom_point()`). fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2024-02-02 07:34:40.301065 | timeMax: 2024-04-02 08:34:40.301638 | timeDiff: 5184000.00057316 nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 1104 using 'ggh4x' package ... Warning: Removed 1 rows containing missing values (`geom_point()`). input timeRange: 7776000 | timeMin: 2024-02-02 06:34:40.301 | timeMax: 2024-04-02 06:34:40.302 | timeDiff: 5184000.00099993 nFacets: 4 nrow dataFiltered(): 1104 using 'ggh4x' package ... Warning: Removed 1 rows containing missing values (`geom_point()`). nFacets: 4 nrow dataFiltered(): 1584 using 'ggh4x' package ... Warning: Removed 9 rows containing missing values (`geom_point()`). nrow dataFiltered(): 1584 using 'ggh4x' package ... Warning: Removed 18 rows containing missing values (`geom_point()`). nrow dataFiltered(): 1584 using 'ggh4x' package ... Warning: Removed 9 rows containing missing values (`geom_point()`). reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt Warning: One or more parsing issues, call `problems()` on your data frame for details, e.g.: dat <- vroom(...) problems(dat) fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2024-02-02 10:11:53.437033 | timeMax: 2024-04-02 11:11:53.437607 | timeDiff: 5184000.00057387 nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp nFacets: 0 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$autoQC03-DDA-ui 1: runApp reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt Warning: One or more parsing issues, call `problems()` on your data frame for details, e.g.: dat <- vroom(...) problems(dat) nFacets: 1 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$autoQC03-DIA-ui 1: runApp nFacets: 1 nFacets: 1 vals$rawrr: FALSE vals$rawDiag: FALSE vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 198 using 'ggh4x' package ... nrow dataFiltered(): 312 using 'ggh4x' package ... input timeRange: 7776000 | timeMin: 2024-02-02 09:11:53.43703 | timeMax: 2024-04-02 09:11:53.43761 | timeDiff: 5184000.00058007 nFacets: 1 nrow dataFiltered(): 312 using 'ggh4x' package ... nFacets: 1 nrow dataFiltered(): 198 using 'ggh4x' package ... input timeRange: 7776000 | timeMin: 2024-02-02 09:11:53.437 | timeMax: 2024-04-02 09:11:53.438 | timeDiff: 5184000.00099993 nFacets: 1 nrow dataFiltered(): 312 using 'ggh4x' package ... nFacets: 1 nrow dataFiltered(): 198 using 'ggh4x' package ... NA p3000/Proteomics/EXPLORIS_1/lkunz_20240328/20240326_003_autoQC03dda_rep.raw p34715/Proteomics/EXPLORIS_1/analytic_20240328/20240328_C34715_008_autoQC03dda.raw NA p3000/Proteomics/EXPLORIS_1/lkunz_20240326/20240326_003_autoQC03dda.raw NA fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2024-02-03 08:11:40.760944 | timeMax: 2024-04-03 09:11:40.761513 | timeDiff: 5184000.00056863 nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 1104 using 'ggh4x' package ... Warning: Removed 1 rows containing missing values (`geom_point()`). input timeRange: 7776000 | timeMin: 2024-02-03 07:11:40.761 | timeMax: 2024-04-03 07:11:40.762 | timeDiff: 5184000.00100017 nFacets: 4 nrow dataFiltered(): 1104 using 'ggh4x' package ... Warning: Removed 1 rows containing missing values (`geom_point()`). nFacets: 4 nrow dataFiltered(): 1520 using 'ggh4x' package ... Warning: Removed 9 rows containing missing values (`geom_point()`). fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2024-02-03 11:39:41.426857 | timeMax: 2024-04-03 12:39:41.427437 | timeDiff: 5184000.00057936 nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 1520 using 'ggh4x' package ... Warning: Removed 9 rows containing missing values (`geom_point()`). input timeRange: 7776000 | timeMin: 2024-02-03 10:39:41.427 | timeMax: 2024-04-03 10:39:41.427 | timeDiff: 5184000 nFacets: 4 nrow dataFiltered(): 1520 using 'ggh4x' package ... Warning: Removed 9 rows containing missing values (`geom_point()`).