Listening on http://127.0.0.1:38681

Attaching package: 'shinydashboard'

The following object is masked from 'package:graphics':

    box

Loading required package: readr
Loading required package: reshape2
Loading required package: lattice
Loading required package: rawDiag
Loading required package: rawrr
Loading required package: ggnewscale
fn has changed to NA
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nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
input timeRange: 7776000 | timeMin: 2024-02-25 09:12:49.035941 | timeMax: 2024-04-25 10:12:49.037306 | timeDiff: 5184000.00136518
Loading required package: bfabricShiny

Attaching package: 'bfabricShiny'

The following object is masked from 'package:base':

    save

nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
nFacets: 4
vals$rawrr: FALSE
vals$rawDiag: FALSE
input timeRange: 7776000 | timeMin: 2024-02-25 08:12:49.036 | timeMax: 2024-04-25 08:12:49.037 | timeDiff: 5184000.00099993
nFacets: 4
nrow dataFiltered(): 1264
Loading required package: ggh4x
Loading required package: ggplot2
using 'ggh4x' package ...
Warning: Removed 7 rows containing missing values (`geom_point()`).
nFacets: 4
nrow dataFiltered(): 1376
using 'ggh4x' package ...
Warning: Removed 4 rows containing missing values (`geom_point()`).
NA
p34944/Proteomics/EXPLORIS_2/analytic_20240423/20240423_C34944_001_autoQC01.raw
plotClick: 
fn has changed to /srv/www/htdocs//p34944/Proteomics/EXPLORIS_2/analytic_20240423/20240423_C34944_001_autoQC01.raw
p34944/Proteomics/EXPLORIS_2/analytic_20240423/20240423_C34944_001_autoQC01.raw
plotClick: 
fn has changed to /srv/www/htdocs//p3000/Proteomics/EXPLORIS_2/analytic_20240417/20240417_003_autoQC01.raw
p3000/Proteomics/EXPLORIS_2/analytic_20240417/20240417_003_autoQC01.raw
plotClick: 
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reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt
Warning: One or more parsing issues, call `problems()` on your data frame for
details, e.g.:
  dat <- vroom(...)
  problems(dat)
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using 'ggh4x' package ...
nrow dataFiltered(): 325
using 'ggh4x' package ...
p3000/Proteomics/EXPLORIS_2/analytic_20240423/20240423_003_autoQC03dda.raw
plotClick: 
fn has changed to /srv/www/htdocs//p3000/Proteomics/EXPLORIS_2/analytic_20240423/20240423_003_autoQC03dda.raw
NA
p3000/Proteomics/EXPLORIS_2/analytic_20240423/20240423_004_autoQC03dia.raw
plotClick: 
fn has changed to /srv/www/htdocs//p3000/Proteomics/EXPLORIS_2/analytic_20240423/20240423_004_autoQC03dia.raw
fn has changed to NA
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fn has changed to NA
nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
input timeRange: 7776000 | timeMin: 2024-02-25 10:10:23.60615 | timeMax: 2024-04-25 11:10:23.607598 | timeDiff: 5184000.00144744
nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
nFacets: 0
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$autoQC03-DDA-ui
   1: runApp
reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt
Warning: One or more parsing issues, call `problems()` on your data frame for
details, e.g.:
  dat <- vroom(...)
  problems(dat)
nFacets: 1
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$autoQC03-DIA-ui
   1: runApp
nFacets: 1
nFacets: 1
vals$rawrr: FALSE
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vals$rawrr: FALSE
vals$rawDiag: FALSE
input timeRange: 7776000 | timeMin: 2024-02-25 09:10:23.60615 | timeMax: 2024-04-25 09:10:23.6076 | timeDiff: 5184000.0014503
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input timeRange: 7776000 | timeMin: 2024-02-25 09:10:23.606 | timeMax: 2024-04-25 09:10:23.608 | timeDiff: 5184000.00200009
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using 'ggh4x' package ...
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using 'ggh4x' package ...
nFacets: 1
nrow dataFiltered(): 312
using 'ggh4x' package ...
nFacets: 1
nrow dataFiltered(): 180
using 'ggh4x' package ...
NA
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using 'ggh4x' package ...
NA
p33354/Proteomics/EXPLORIS_1/tomasfranziska_20240422/20240422_033_autoQC03dda.raw
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using 'ggh4x' package ...
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p33354/Proteomics/EXPLORIS_1/tomasfranziska_20240422/20240422_033_autoQC03dda.raw
p23412/Proteomics/EXPLORIS_1/gillet_20240416/20240416_013_autoQC03dia.raw
NA
fn has changed to NA
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fn has changed to NA
fn has changed to NA
nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
input timeRange: 7776000 | timeMin: 2024-02-25 10:57:26.473204 | timeMax: 2024-04-25 11:57:26.473816 | timeDiff: 5184000.00061131
nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
nFacets: 4
vals$rawrr: FALSE
vals$rawDiag: FALSE
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using 'ggh4x' package ...
Warning: Removed 7 rows containing missing values (`geom_point()`).
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nFacets: 4
nrow dataFiltered(): 1264
using 'ggh4x' package ...
Warning: Removed 7 rows containing missing values (`geom_point()`).
NA
nFacets: 4
nrow dataFiltered(): 1392
using 'ggh4x' package ...
Warning: Removed 4 rows containing missing values (`geom_point()`).
p35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_001_autoQC01.raw
plotClick: 
fn has changed to /srv/www/htdocs//p35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_001_autoQC01.raw
p35016/Proteomics/EXPLORIS_2/analytic_20240425/20240425_C35016_001_autoQC01.raw
p34746/Proteomics/EXPLORIS_2/analytic_20240404/20240404_C34746_007_autoQC01.raw
NA


Execution halted