Listening on http://127.0.0.1:46683

Attaching package: 'shinydashboard'

The following object is masked from 'package:graphics':

    box

Loading required package: readr
Loading required package: reshape2
Loading required package: lattice
Loading required package: rawDiag
Loading required package: rawrr
Loading required package: ggnewscale
fn has changed to NA
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nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
input timeRange: 7776000 | timeMin: 2024-05-16 15:01:07.642473 | timeMax: 2024-07-15 15:01:07.64305 | timeDiff: 5184000.00057721
Loading required package: bfabricShiny

Attaching package: 'bfabricShiny'

The following object is masked from 'package:base':

    save

nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
nFacets: 4
vals$rawrr: FALSE
vals$rawDiag: FALSE
nrow dataFiltered(): 1744
Loading required package: ggh4x
Loading required package: ggplot2

Attaching package: 'ggh4x'

The following object is masked from 'package:ggplot2':

    guide_axis_logticks

using 'ggh4x' package ...
Warning: Removed 1 row containing missing values or values outside the scale
range (`geom_point()`).
input timeRange: 7776000 | timeMin: 2024-05-16 13:01:07.642 | timeMax: 2024-07-15 13:01:07.643 | timeDiff: 5184000.00099993
nFacets: 4
nrow dataFiltered(): 1744
using 'ggh4x' package ...
Warning: Removed 1 row containing missing values or values outside the scale
range (`geom_point()`).
NA
p35673/Proteomics/LUMOS_2/analytic_20240709/20240709_C35673_013r_autoQC01.raw
plotClick: 
fn has changed to /srv/www/htdocs//p35673/Proteomics/LUMOS_2/analytic_20240709/20240709_C35673_013r_autoQC01.raw
NA
p3000/Proteomics/LUMOS_2/analytics_20240701_auoQC03_old_vs_newBatch/20240715_001_autoQC01.raw
NA
p3000/Proteomics/LUMOS_2/analytics_20240701_auoQC03_old_vs_newBatch/20240715_001_autoQC01.raw
NA
p3000/Proteomics/LUMOS_2/analytics_20240701_auoQC03_old_vs_newBatch/20240715_001_autoQC01.raw
NA
p3000/Proteomics/LUMOS_2/analytics_20240701_auoQC03_old_vs_newBatch/20240715_001_autoQC01.raw
nFacets: 3
reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt
Warning: One or more parsing issues, call `problems()` on your data frame for
details, e.g.:
  dat <- vroom(...)
  problems(dat)
nFacets: 1
vals$rawrr: FALSE
vals$rawDiag: FALSE
vals$rawrr: FALSE
vals$rawDiag: FALSE
nrow dataFiltered(): 432
using 'ggh4x' package ...
nrow dataFiltered(): 520
using 'ggh4x' package ...
`geom_line()`: Each group consists of only one observation.
ℹ Do you need to adjust the group aesthetic?
NA
p3000/Proteomics/LUMOS_2/analytics_20240701_auoQC03_old_vs_newBatch/20240708_002_autoQC03dda.raw
plotClick: 
fn has changed to /srv/www/htdocs//p3000/Proteomics/LUMOS_2/analytics_20240701_auoQC03_old_vs_newBatch/20240708_002_autoQC03dda.raw
p35673/Proteomics/LUMOS_2/analytic_20240709/20240709_C35673_014r_autoQC03dia.raw


Execution halted