Listening on http://127.0.0.1:34499 Attaching package: 'shinydashboard' The following object is masked from 'package:graphics': box Loading required package: readr Loading required package: reshape2 Loading required package: lattice Loading required package: rawDiag Loading required package: rawrr Loading required package: ggnewscale fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2024-05-26 10:44:04.616393 | timeMax: 2024-07-25 10:44:04.616979 | timeDiff: 5184000.00058651 Loading required package: bfabricShiny Attaching package: 'bfabricShiny' The following object is masked from 'package:base': save nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 1920 Loading required package: ggh4x Loading required package: ggplot2 Attaching package: 'ggh4x' The following object is masked from 'package:ggplot2': guide_axis_logticks using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 7776000 | timeMin: 2024-05-26 08:44:04.616 | timeMax: 2024-07-25 08:44:04.617 | timeDiff: 5184000.00100017 nFacets: 4 nrow dataFiltered(): 1920 using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). p3127/Proteomics/LUMOS_2/ackle_20240719_NL20/20240719_001_autoQC01.raw NA fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2024-05-26 11:03:34.52151 | timeMax: 2024-07-25 11:03:34.522085 | timeDiff: 5184000.00057483 nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp nFacets: 0 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$autoQC03-DDA-ui 1: runApp reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt Warning: One or more parsing issues, call `problems()` on your data frame for details, e.g.: dat <- vroom(...) problems(dat) nFacets: 1 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$autoQC03-DIA-ui 1: runApp nFacets: 1 nFacets: 1 vals$rawrr: FALSE vals$rawDiag: FALSE vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 0 nrow dataFiltered(): 455 using 'ggh4x' package ... input timeRange: 7776000 | timeMin: 2024-05-26 09:03:34.52151 | timeMax: 2024-07-25 09:03:34.52209 | timeDiff: 5184000.00058007 nFacets: 1 nrow dataFiltered(): 455 using 'ggh4x' package ... nFacets: 1 nrow dataFiltered(): 0 input timeRange: 7776000 | timeMin: 2024-05-26 09:03:34.522 | timeMax: 2024-07-25 09:03:34.522 | timeDiff: 5184000 nFacets: 1 nrow dataFiltered(): 455 using 'ggh4x' package ... nFacets: 1 nrow dataFiltered(): 0 fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2024-05-26 12:43:11.482911 | timeMax: 2024-07-25 12:43:11.483484 | timeDiff: 5184000.00057292 nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 1936 using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 7776000 | timeMin: 2024-05-26 10:43:11.483 | timeMax: 2024-07-25 10:43:11.483 | timeDiff: 5184000 nFacets: 4 nrow dataFiltered(): 1936 using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 7776000 | timeMin: 2024-04-26 10:43:12.35438 | timeMax: 2024-07-25 10:43:11.483 | timeDiff: 7775999.12862015 nFacets: 4 nrow dataFiltered(): 2544 using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 7776000 | timeMin: 2024-04-26 12:43:26.94851 | timeMax: 2024-07-25 10:43:11.483 | timeDiff: 7775984.53448987 nFacets: 4 nrow dataFiltered(): 2544 using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 7776000 | timeMin: 2024-04-26 10:43:26.949 | timeMax: 2024-07-25 10:43:11.483 | timeDiff: 7775984.53400016 nFacets: 4 nrow dataFiltered(): 2544 using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 7776000 | timeMin: 2024-04-26 12:43:28.892482 | timeMax: 2024-07-25 10:43:11.483 | timeDiff: 7775982.59051824 nFacets: 4 nrow dataFiltered(): 2544 using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 7776000 | timeMin: 2024-04-26 10:43:28.892 | timeMax: 2024-07-25 10:43:11.483 | timeDiff: 7775982.59100008 nFacets: 4 nrow dataFiltered(): 2544 using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 7776000 | timeMin: 2024-04-26 12:43:30.649038 | timeMax: 2024-07-25 10:43:11.483 | timeDiff: 7775980.8339622 nFacets: 4 nrow dataFiltered(): 2544 using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 7776000 | timeMin: 2024-04-26 10:43:30.649 | timeMax: 2024-07-25 10:43:11.483 | timeDiff: 7775980.83400011 nFacets: 4 nrow dataFiltered(): 2544 using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 7776000 | timeMin: 2024-04-26 12:43:32.444312 | timeMax: 2024-07-25 10:43:11.483 | timeDiff: 7775979.03868842 nFacets: 4 nrow dataFiltered(): 2544 using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 7776000 | timeMin: 2024-04-26 10:43:32.444 | timeMax: 2024-07-25 10:43:11.483 | timeDiff: 7775979.03900003 nFacets: 4 nrow dataFiltered(): 2544 using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 7776000 | timeMin: 2024-04-26 12:43:34.22326 | timeMax: 2024-07-25 10:43:11.483 | timeDiff: 7775977.25973988 nFacets: 4 nrow dataFiltered(): 2544 using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 7776000 | timeMin: 2024-04-26 10:43:34.223 | timeMax: 2024-07-25 10:43:11.483 | timeDiff: 7775977.25999999 nFacets: 4 nrow dataFiltered(): 2544 using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 7776000 | timeMin: 2024-04-26 12:43:35.97738 | timeMax: 2024-07-25 10:43:11.483 | timeDiff: 7775975.50562 nFacets: 4 nrow dataFiltered(): 2544 using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 7776000 | timeMin: 2024-04-26 10:43:35.977 | timeMax: 2024-07-25 10:43:11.483 | timeDiff: 7775975.50600004 input timeRange: 7776000 | timeMin: 2024-04-26 12:43:37.778395 | timeMax: 2024-07-25 10:43:11.483 | timeDiff: 7775973.70460534 nrow dataFiltered(): 2544 using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). nFacets: 4 input timeRange: 7776000 | timeMin: 2024-04-26 10:43:37.778 | timeMax: 2024-07-25 10:43:11.483 | timeDiff: 7775973.70499992 nrow dataFiltered(): 2544 using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). nFacets: 4 input timeRange: 7776000 | timeMin: 2024-04-26 12:43:39.001246 | timeMax: 2024-07-25 10:43:11.483 | timeDiff: 7775972.4817543 nrow dataFiltered(): 2544 using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). nFacets: 4 input timeRange: 7776000 | timeMin: 2024-04-26 10:43:39.001 | timeMax: 2024-07-25 10:43:11.483 | timeDiff: 7775972.48200011 nrow dataFiltered(): 2544 using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). nFacets: 4 input timeRange: 7776000 | timeMin: 2024-04-26 12:43:40.849376 | timeMax: 2024-07-25 10:43:11.483 | timeDiff: 7775970.63362432 nrow dataFiltered(): 2544 using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). nFacets: 4 input timeRange: 7776000 | timeMin: 2024-04-26 10:43:40.849 | timeMax: 2024-07-25 10:43:11.483 | timeDiff: 7775970.63400006 nrow dataFiltered(): 2544 using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). nFacets: 4 input timeRange: 7776000 | timeMin: 2024-04-26 12:43:42.659131 | timeMax: 2024-07-25 10:43:11.483 | timeDiff: 7775968.82386947 nrow dataFiltered(): 2544 using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). nFacets: 4 input timeRange: 7776000 | timeMin: 2024-04-26 10:43:42.659 | timeMax: 2024-07-25 10:43:11.483 | timeDiff: 7775968.82400012 nrow dataFiltered(): 2544 using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). nFacets: 4 input timeRange: 7776000 | timeMin: 2024-04-26 12:43:44.510001 | timeMax: 2024-07-25 10:43:11.483 | timeDiff: 7775966.97299862 nrow dataFiltered(): 2544 using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). nFacets: 4 input timeRange: 7776000 | timeMin: 2024-04-26 10:43:44.51 | timeMax: 2024-07-25 10:43:11.483 | timeDiff: 7775966.97300005 nrow dataFiltered(): 2544 using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). nFacets: 4 input timeRange: 7776000 | timeMin: 2024-04-26 12:43:46.355484 | timeMax: 2024-07-25 10:43:11.483 | timeDiff: 7775965.12751555 nrow dataFiltered(): 2544 using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). nFacets: 4 input timeRange: 7776000 | timeMin: 2024-04-26 10:43:46.355 | timeMax: 2024-07-25 10:43:11.483 | timeDiff: 7775965.12800002 nrow dataFiltered(): 2544 using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). nFacets: 4 input timeRange: 7776000 | timeMin: 2024-04-26 12:43:48.20218 | timeMax: 2024-07-25 10:43:11.483 | timeDiff: 7775963.28082037 nrow dataFiltered(): 2544 using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). nFacets: 4 input timeRange: 7776000 | timeMin: 2024-04-26 10:43:48.202 | timeMax: 2024-07-25 10:43:11.483 | timeDiff: 7775963.28100014 nrow dataFiltered(): 2544 using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). nFacets: 4 input timeRange: 7776000 | timeMin: 2024-04-26 12:43:50.05917 | timeMax: 2024-07-25 10:43:11.483 | timeDiff: 7775961.42383003 nrow dataFiltered(): 2544 using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). nFacets: 4 input timeRange: 7776000 | timeMin: 2024-04-26 10:43:50.059 | timeMax: 2024-07-25 10:43:11.483 | timeDiff: 7775961.42400002 nrow dataFiltered(): 2544 using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). nFacets: 4 input timeRange: 7776000 | timeMin: 2024-04-26 12:43:51.920188 | timeMax: 2024-07-25 10:43:11.483 | timeDiff: 7775959.56281209 nrow dataFiltered(): 2544 using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). nFacets: 4 input timeRange: 7776000 | timeMin: 2024-04-26 10:43:51.92 | timeMax: 2024-07-25 10:43:11.483 | timeDiff: 7775959.56299996 nrow dataFiltered(): 2544 using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). nFacets: 4 input timeRange: 7776000 | timeMin: 2024-04-26 12:43:53.819054 | timeMax: 2024-07-25 10:43:11.483 | timeDiff: 7775957.66394615 nrow dataFiltered(): 2544 using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). nFacets: 4 input timeRange: 7776000 | timeMin: 2024-04-26 10:43:53.819 | timeMax: 2024-07-25 10:43:11.483 | timeDiff: 7775957.66400003 nrow dataFiltered(): 2544 using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). nFacets: 4 input timeRange: 7776000 | timeMin: 2024-04-26 12:43:55.737915 | timeMax: 2024-07-25 10:43:11.483 | timeDiff: 7775955.745085 nrow dataFiltered(): 2544 using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). nFacets: 4 input timeRange: 7776000 | timeMin: 2024-04-26 10:43:55.738 | timeMax: 2024-07-25 10:43:11.483 | timeDiff: 7775955.74500012 nrow dataFiltered(): 2544 using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). nFacets: 4 input timeRange: 7776000 | timeMin: 2024-04-26 12:43:57.661939 | timeMax: 2024-07-25 10:43:11.483 | timeDiff: 7775953.82106066 nrow dataFiltered(): 2544 using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). nFacets: 4 input timeRange: 7776000 | timeMin: 2024-04-26 10:43:57.662 | timeMax: 2024-07-25 10:43:11.483 | timeDiff: 7775953.8210001 nrow dataFiltered(): 2544 using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). nFacets: 4 input timeRange: 7776000 | timeMin: 2024-04-26 12:43:59.423656 | timeMax: 2024-07-25 10:43:11.483 | timeDiff: 7775952.05934453 fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2024-05-26 12:44:02.425744 | timeMax: 2024-07-25 12:44:02.426311 | timeDiff: 5184000.00056648 nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp nrow dataFiltered(): 2544 using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). nFacets: 4 input timeRange: 7776000 | timeMin: 2024-04-26 10:43:59.424 | timeMax: 2024-07-25 10:43:11.483 | timeDiff: 7775952.05900002 nrow dataFiltered(): 2544 using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). nFacets: 4 input timeRange: 7776000 | timeMin: 2024-04-26 12:44:04.069212 | timeMax: 2024-07-25 10:43:11.483 | timeDiff: 7775947.41378808 nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 1936 using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 7776000 | timeMin: 2024-05-26 10:44:02.426 | timeMax: 2024-07-25 10:44:02.426 | timeDiff: 5184000 nFacets: 4 nrow dataFiltered(): 1936 using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 7776000 | timeMin: 2024-04-29 10:44:04.411 | timeMax: 2024-07-25 10:44:02.426 | timeDiff: 7516798.0150001 nFacets: 4 nrow dataFiltered(): 2496 using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 7776000 | timeMin: 2024-04-26 10:44:08.36607 | timeMax: 2024-07-25 10:44:02.426 | timeDiff: 7775994.05993009 nFacets: 4 nrow dataFiltered(): 2544 using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 7776000 | timeMin: 2024-04-26 12:44:13.28371 | timeMax: 2024-07-25 10:44:02.426 | timeDiff: 7775989.14228988 nFacets: 4 nrow dataFiltered(): 2544 using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 7776000 | timeMin: 2024-04-26 10:44:13.284 | timeMax: 2024-07-25 10:44:02.426 | timeDiff: 7775989.1420002 nFacets: 4 nrow dataFiltered(): 2544 using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 7776000 | timeMin: 2024-04-26 12:44:15.100712 | timeMax: 2024-07-25 10:44:02.426 | timeDiff: 7775987.3252883 nFacets: 4 nrow dataFiltered(): 2544 using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 7776000 | timeMin: 2024-04-26 10:44:15.101 | timeMax: 2024-07-25 10:44:02.426 | timeDiff: 7775987.32500005 nFacets: 4 nrow dataFiltered(): 2544 using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 7776000 | timeMin: 2024-04-26 12:44:17.175436 | timeMax: 2024-07-25 10:44:02.426 | timeDiff: 7775985.25056458 nFacets: 4 nrow dataFiltered(): 2544 using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 7776000 | timeMin: 2024-04-26 10:44:17.175 | timeMax: 2024-07-25 10:44:02.426 | timeDiff: 7775985.25100017 nFacets: 4 nrow dataFiltered(): 2544 using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 7776000 | timeMin: 2024-04-26 12:44:18.95437 | timeMax: 2024-07-25 10:44:02.426 | timeDiff: 7775983.4716301 nFacets: 4 nrow dataFiltered(): 2544 using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 7776000 | timeMin: 2024-04-26 10:44:18.954 | timeMax: 2024-07-25 10:44:02.426 | timeDiff: 7775983.47200012 nFacets: 4 nrow dataFiltered(): 2544 using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 7776000 | timeMin: 2024-04-26 12:44:20.812158 | timeMax: 2024-07-25 10:44:02.426 | timeDiff: 7775981.61384225 nFacets: 4 nrow dataFiltered(): 2544 using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 7776000 | timeMin: 2024-04-26 10:44:20.812 | timeMax: 2024-07-25 10:44:02.426 | timeDiff: 7775981.61400008 nFacets: 4 nrow dataFiltered(): 2544 using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 7776000 | timeMin: 2024-04-26 12:44:22.606418 | timeMax: 2024-07-25 10:44:02.426 | timeDiff: 7775979.81958199 nFacets: 4 nrow dataFiltered(): 2544 using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 7776000 | timeMin: 2024-04-26 10:44:22.606 | timeMax: 2024-07-25 10:44:02.426 | timeDiff: 7775979.82000017 nFacets: 4 nrow dataFiltered(): 2544 using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 7776000 | timeMin: 2024-04-26 12:44:24.413327 | timeMax: 2024-07-25 10:44:02.426 | timeDiff: 7775978.01267362 fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2024-05-26 12:44:27.70942 | timeMax: 2024-07-25 12:44:27.709992 | timeDiff: 5184000.00057149 nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp nFacets: 4 vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 1936 using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). input timeRange: 7776000 | timeMin: 2024-05-26 10:44:27.709 | timeMax: 2024-07-25 10:44:27.71 | timeDiff: 5184000.00099993 nFacets: 4 nrow dataFiltered(): 1936 using 'ggh4x' package ... Warning: Removed 4 rows containing missing values or values outside the scale range (`geom_point()`). fn has changed to NA fn has changed to NA fn has changed to NA fn has changed to NA nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp input timeRange: 7776000 | timeMin: 2024-05-27 10:26:54.825521 | timeMax: 2024-07-26 10:26:54.826088 | timeDiff: 5184000.00056744 nFacets: 4 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$__autoQC01__-ui 1: runApp nFacets: 0 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$autoQC03-DDA-ui 1: runApp reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt Warning: One or more parsing issues, call `problems()` on your data frame for details, e.g.: dat <- vroom(...) problems(dat) nFacets: 1 Warning: Error in if: argument is of length zero 97: renderUI 96: func 83: renderFunc 82: output$autoQC03-DIA-ui 1: runApp nFacets: 1 nFacets: 1 vals$rawrr: FALSE vals$rawDiag: FALSE vals$rawrr: FALSE vals$rawDiag: FALSE nrow dataFiltered(): 342 using 'ggh4x' package ... nrow dataFiltered(): 325 using 'ggh4x' package ... input timeRange: 7776000 | timeMin: 2024-05-27 08:26:54.82552 | timeMax: 2024-07-26 08:26:54.82609 | timeDiff: 5184000.00057006 nFacets: 1 nrow dataFiltered(): 325 using 'ggh4x' package ... nFacets: 1 nrow dataFiltered(): 342 using 'ggh4x' package ... input timeRange: 7776000 | timeMin: 2024-05-27 08:26:54.826 | timeMax: 2024-07-26 08:26:54.826 | timeDiff: 5184000 nFacets: 1 nrow dataFiltered(): 325 using 'ggh4x' package ... nFacets: 1 nrow dataFiltered(): 342 using 'ggh4x' package ... nFacets: 2 nrow dataFiltered(): 533 using 'ggh4x' package ... nFacets: 1 nrow dataFiltered(): 450 using 'ggh4x' package ... p3127/Proteomics/LUMOS_2/ackle_20240719_NL20/20240719_038_autoQC03dda.raw plotClick: fn has changed to /srv/www/htdocs//p3127/Proteomics/LUMOS_2/ackle_20240719_NL20/20240719_038_autoQC03dda.raw p3127/Proteomics/LUMOS_2/ackle_20240719_NL20/20240719_038_autoQC03dda.raw plotClick: fn has changed to /srv/www/htdocs//p3127/Proteomics/LUMOS_2/ackle_20240719_NL20/20240725_038_autoQC03dia.raw p3127/Proteomics/LUMOS_2/ackle_20240719_NL20/20240725_038_autoQC03dia.raw NA Execution halted