Listening on http://127.0.0.1:42675

Attaching package: 'shinydashboard'

The following object is masked from 'package:graphics':

    box

Loading required package: readr
Loading required package: reshape2
Loading required package: lattice
Loading required package: rawDiag
Loading required package: rawrr
Loading required package: ggnewscale
fn has changed to NA
fn has changed to NA
fn has changed to NA
fn has changed to NA
nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
input timeRange: 7776000 | timeMin: 2024-05-31 09:27:55.291846 | timeMax: 2024-07-30 09:27:55.292426 | timeDiff: 5184000.00058007
Loading required package: bfabricShiny

Attaching package: 'bfabricShiny'

The following object is masked from 'package:base':

    save

nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
fn has changed to NA
fn has changed to NA
fn has changed to NA
fn has changed to NA
nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
input timeRange: 7776000 | timeMin: 2024-05-31 09:27:59.310552 | timeMax: 2024-07-30 09:27:59.311172 | timeDiff: 5184000.00062037
nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
nFacets: 0
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$autoQC03-DDA-ui
   1: runApp
reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt
Warning: One or more parsing issues, call `problems()` on your data frame for
details, e.g.:
  dat <- vroom(...)
  problems(dat)
nFacets: 1
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$autoQC03-DIA-ui
   1: runApp
nFacets: 1
nFacets: 1
vals$rawrr: FALSE
vals$rawDiag: FALSE
vals$rawrr: FALSE
vals$rawDiag: FALSE
nrow dataFiltered(): 360
Loading required package: ggh4x
Loading required package: ggplot2

Attaching package: 'ggh4x'

The following object is masked from 'package:ggplot2':

    guide_axis_logticks

using 'ggh4x' package ...
nrow dataFiltered(): 351
using 'ggh4x' package ...
input timeRange: 7776000 | timeMin: 2024-05-31 07:27:59.31055 | timeMax: 2024-07-30 07:27:59.31117 | timeDiff: 5184000.00061989
nFacets: 1
nrow dataFiltered(): 351
using 'ggh4x' package ...
nFacets: 1
nrow dataFiltered(): 360
using 'ggh4x' package ...
input timeRange: 7776000 | timeMin: 2024-05-31 07:27:59.311 | timeMax: 2024-07-30 07:27:59.311 | timeDiff: 5184000
nFacets: 1
nrow dataFiltered(): 351
using 'ggh4x' package ...
nFacets: 1
nrow dataFiltered(): 360
using 'ggh4x' package ...
nFacets: 4
nrow dataFiltered(): 520
using 'ggh4x' package ...
nFacets: 1
nrow dataFiltered(): 288
using 'ggh4x' package ...
input timeRange: 31536000 | timeMin: 2024-05-31 07:27:59.311 | timeMax: 2024-07-30 09:28:11.417849 | timeDiff: 5184012.10684919
nFacets: 4
nrow dataFiltered(): 520
using 'ggh4x' package ...
nFacets: 1
nrow dataFiltered(): 288
using 'ggh4x' package ...
input timeRange: 31536000 | timeMin: 2024-05-31 07:27:59.311 | timeMax: 2024-07-30 07:28:11.418 | timeDiff: 5184012.10699987
nFacets: 4
nrow dataFiltered(): 520
using 'ggh4x' package ...
nFacets: 1
nrow dataFiltered(): 288
using 'ggh4x' package ...
input timeRange: 31536000 | timeMin: 2023-08-24 07:28:12.879 | timeMax: 2024-07-30 07:28:11.418 | timeDiff: 29462398.539
nFacets: 4
nrow dataFiltered(): 4940
using 'ggh4x' package ...
nFacets: 1
nrow dataFiltered(): 864
using 'ggh4x' package ...
NA
nFacets: 4
vals$rawrr: FALSE
vals$rawDiag: FALSE
nrow dataFiltered(): 7584
using 'ggh4x' package ...
Warning: Removed 16 rows containing missing values or values outside the scale
range (`geom_point()`).
p3000/Proteomics/LUMOS_1/pgehrig_20230814_TMT/20230814_42_autoQC01.raw
NA


Execution halted