Listening on http://127.0.0.1:37625

Attaching package: 'shinydashboard'

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Loading required package: readr
Loading required package: reshape2
Loading required package: lattice
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Loading required package: rawrr
Loading required package: ggnewscale
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nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
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  82: output$__autoQC01__-ui
   1: runApp
input timeRange: 7776000 | timeMin: 2024-08-12 16:30:28.049901 | timeMax: 2024-10-11 16:30:28.05049 | timeDiff: 5184000.00058961
Loading required package: bfabricShiny

Attaching package: 'bfabricShiny'

The following object is masked from 'package:base':

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nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
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  82: output$__autoQC01__-ui
   1: runApp
nFacets: 4
vals$rawrr: FALSE
vals$rawDiag: FALSE
nrow dataFiltered(): 784
Warning: Error in .ggplot: !is.null(variables) is not TRUE
  173: <Anonymous>
  172: stop
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  170: .ggplot
  169: ggplot2FUN
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nrow dataFiltered(): 784
Loading required package: ggh4x
Loading required package: ggplot2

Attaching package: 'ggh4x'

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using 'ggh4x' package ...
input timeRange: 7776000 | timeMin: 2024-08-12 14:30:28.05 | timeMax: 2024-10-11 14:30:28.05 | timeDiff: 5184000
nFacets: 4
nrow dataFiltered(): 784
using 'ggh4x' package ...
p3000/Proteomics/LUMOS_1/pgehrig_20240422_autoQC/20240821_01_autoQC01_flex.raw
NA
nFacets: 4
reading /scratch/DIAQC/qc/dump/autoQC03-diann.txt
Warning: One or more parsing issues, call `problems()` on your data frame for
details, e.g.:
  dat <- vroom(...)
  problems(dat)
nFacets: 1
vals$rawrr: FALSE
vals$rawDiag: FALSE
vals$rawrr: FALSE
vals$rawDiag: FALSE
nrow dataFiltered(): 390
Warning: Error in .ggplot: !is.null(variables) is not TRUE
  173: <Anonymous>
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  170: .ggplot
  169: ggplot2FUN
  168: renderPlot
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    1: runApp
nrow dataFiltered(): 414
Warning: Error in .ggplot: !is.null(variables) is not TRUE
  173: <Anonymous>
  172: stop
  171: stopifnot
  170: .ggplot
  169: ggplot2FUN
  168: renderPlot
  166: func
  126: drawPlot
  112: <reactive:plotObj>
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   82: output$autoQC03-DIA-plot
    1: runApp
nrow dataFiltered(): 414
using 'ggh4x' package ...
nrow dataFiltered(): 390
using 'ggh4x' package ...
NA
NA
p3000/Proteomics/LUMOS_1/pgehrig_20241008_autoQC/20241008_02_autoQC03dia_flex.raw
NA
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nFacets: 4
Warning: Error in if: argument is of length zero
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  82: output$__autoQC01__-ui
   1: runApp
Warning: Error in if: missing value where TRUE/FALSE needed
  1: runApp
input timeRange: 1209600 | timeMin: 2024-10-04 16:56:38.285031 | timeMax: 2024-10-11 16:56:38.285061 | timeDiff: 604800.000030041
nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
fn has changed to NA
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nFacets: 4
Warning: Error in if: argument is of length zero
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  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp
Warning: Error in if: missing value where TRUE/FALSE needed
  1: runApp
input timeRange: 1209600 | timeMin: 2024-10-04 16:56:44.471997 | timeMax: 2024-10-11 16:56:44.472043 | timeDiff: 604800.000045538
nFacets: 4
Warning: Error in if: argument is of length zero
  97: renderUI
  96: func
  83: renderFunc
  82: output$__autoQC01__-ui
   1: runApp


Execution halted